mRNA_P-littoralis_Contig681.6.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig681.6.2
Unique Name	mRNA_P-littoralis_Contig681.6.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A6H5KM04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM04_9PHAE)

HSP 1 Score: 352 bits (904), Expect = 4.580e-114
Identity = 214/360 (59.44%), Postives = 244/360 (67.78%), Query Frame = 2

Query:   20 TLRRKLDVEIMKHAALLITLRLVGSAASPPAAFVNPAATAAASPAFTTNRPEL-GDVSS--------PIAPQGSLQKQRHQQQHEQHSAHGQRNIVVASLGGSATSVAGVLASSTPSVVSWLPTALATIVGVLAGASLVNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGPPVNSFSGPNDS 1066
            T + +L    MK A +L  + LV SA S  AAFV PA   A S AFT NRP L GD SS        P+ P   L +Q  Q+Q  +H        +VASLGG    VA V+ SST  VVSWL       VG L  AS+ N LQG    DLGLTP++ILGVPAEEATA+ V+RLGKAGFMQLFY+S  P  GDLDGEYRARTL+MG+LHPITAIITHRIWGPGRWLGKGIR+GS EGYNLF+                          +GLPSDT+R+R FRFS  S SVFDRG SS+L+YA+AG KNGPLFGGMRDEVRKVND+LF+GLGYIQAFGGKYN+APFVMEGPPV  FS P+ S
Sbjct:   29 TFQPRLKQGSMKRAFVLTVVPLVSSA-SLAAAFVCPAPATATSAAFTPNRPRLAGDASSSSASATIAPLRPARDLHRQ--QRQRGRH--------LVASLGGGVPEVAAVVISSTSYVVSWL-------VGTLVAASIANFLQGRPYSDLGLTPDKILGVPAEEATADHVARLGKAGFMQLFYASQCPVTGDLDGEYRARTLNMGVLHPITAIITHRIWGPGRWLGKGIRTGSREGYNLFAS---------------------ESKGIGLPSDTQRERCFRFSQSSDSVFDRGVSSELDYARAG-KNGPLFGGMRDEVRKVNDKLFIGLGYIQAFGGKYNSAPFVMEGPPVGEFSSPDKS 348

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: D7FZY5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY5_ECTSI)

HSP 1 Score: 310 bits (795), Expect = 4.430e-98
Identity = 193/322 (59.94%), Postives = 217/322 (67.39%), Query Frame = 2

Query:   50 MKHAALLITLRLVGSAASPPAAFVNPAATAAASPAFTTNRPEL-GDVSSPIAPQGSLQKQRHQQQHEQHSAHGQRNIVVASLGGSATSVAGVLASSTPSVVSWLPTALATIVGVLAGASLVNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYN 1006
            MK A +L  L LV SA S  AAFV PA   A S AFT NRP L GD S+                       G+   +VASLGG    VA V+ SST SVVSWL       VG L  AS+ N LQG    DLGLTP++ILGVPAEEATA+ V+RLGKAGFMQLFY+S  PA GDLDGEYRARTL+MG+LHPITAIITHRIWGPGRWLGKGIR+GS EGYNLF+ G E +                    +GLPSDT+R+R FRFS +S SVFDRG SS L+YA+AG KNGPLFGGMRDEVRKVND+LF+GLGYIQAFG   N
Sbjct:    1 MKRAFVLTVLPLVSSA-SLAAAFVCPAPATATSAAFTPNRPRLAGDTSASSXXXXXXXXXXXXXXXXXXXQRGRH--LVASLGGGVPEVAAVVVSSTSSVVSWL-------VGALVAASIANFLQGRPYRDLGLTPDKILGVPAEEATADHVARLGKAGFMQLFYASQCPATGDLDGEYRARTLNMGVLHPITAIITHRIWGPGRWLGKGIRTGSREGYNLFT-GSEAKG-------------------IGLPSDTQRERSFRFSQFSDSVFDRGVSSGLDYARAG-KNGPLFGGMRDEVRKVNDKLFIGLGYIQAFGDTGN 291

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A5K7Z8H1_9DELT (Uncharacterized protein n=1 Tax=Desulfosarcina widdelii TaxID=947919 RepID=A0A5K7Z8H1_9DELT)

HSP 1 Score: 138 bits (348), Expect = 1.470e-31
Identity = 92/224 (41.07%), Postives = 123/224 (54.91%), Query Frame = 2

Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSE---GYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGPPVNSFSGPND 1063
            +N LQ G  G  G + EQILGVP E+AT  D+ RL K+  MQLF+S+  P   DL GEY+A+ L +GI+ P     T   +GPGRWLGKG  + +++   GYNLF    EK                      G    TRR +    +    SVFDR  S KL+Y+   +  GP+ G MRDE+RK+N  LF+G+GY+   GG  N  PFV+ G P + + GP+D
Sbjct:  306 INILQNGSSGWDGRSMEQILGVPPEQATLADIERLSKSEVMQLFHSATPPTLSDLQGEYQAKNLAVGIMAPAADFYTQHFFGPGRWLGKGFTAEAAQNGQGYNLFQ---EKEGD-------------------GTIWRTRRMK----TSVGTSVFDRKESFKLDYSVYNK--GPVHG-MRDELRKINPALFIGMGYMPIGGGSINPGPFVVYGNP-SPWVGPSD 499

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A7C1GQ52_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C1GQ52_9DELT)

HSP 1 Score: 123 bits (309), Expect = 1.180e-28
Identity = 79/219 (36.07%), Postives = 112/219 (51.14%), Query Frame = 2

Query:  401 SLVNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSSPAA--GDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSE---GYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPY-SPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGPPV 1039
            +++N LQ G+ G  G + E+ILG+  E+AT +D+ RL KA  MQLF+++PA     ++GEYRA  L +GIL P  A  TH  +G G W GK       +   GYN+FS    K+ T                            R  +F+ Y  PS  DR  +  L+Y+     N  +   M DEVR++ND LF+ +G++   GG  N APFV+ GPP 
Sbjct:   22 TIINILQNGLGGYKGRSVEEILGISPEKATLKDIQRLTKAQVMQLFHAAPAPDFASMNGEYRAELLPLGILAPSAAFYTHHFFGSGHWEGKAFFPFEDQRGWGYNIFS----KKGTL--------------------------SRMRKFNSYCGPSTIDRKPAFHLDYSP---HNSGIVHSMHDEVRQINDHLFICMGHMALGGGAVNPAPFVLMGPPT 207

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A2N1TA87_9SPIR (Uncharacterized protein n=1 Tax=Spirochaetae bacterium HGW-Spirochaetae-1 TaxID=2013832 RepID=A0A2N1TA87_9SPIR)

HSP 1 Score: 122 bits (307), Expect = 2.540e-28
Identity = 83/228 (36.40%), Postives = 117/228 (51.32%), Query Frame = 2

Query:  377 IVGVLAGASL----VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSSPAA--GDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGI---RSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPY-SPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEG 1030
            ++GV+ G ++    VN LQ G+ G  G T +QILGV AE+AT  D+ +L K+  MQLFY++PA   G + GEY+A+T+ +G++       TH  +GPG W GK           GYNLF+                        SD      TR  R  + + +   S  D   S  L+Y+     NG L   M DEVRK+NDRLF+ +G++ A GG  N APF++ G
Sbjct:   10 VIGVIVGLNVLVTGVNILQNGIGGWDGRTVDQILGVSAEKATPADIEKLSKSEVMQLFYAAPAPAFGTMKGEYKAKTISVGVMAASADYFTHHFFGPGHWEGKAFFPFEKDKGWGYNLFT---------------------VKNSD----GTTRIARTRKMNNWVGKSTMDDRDSFHLDYSPY---NGGLVKSMHDEVRKINDRLFICMGHMAAGGGAINPAPFILYG 209

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A2N2F743_9DELT (Uncharacterized protein (Fragment) n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-9 TaxID=2013759 RepID=A0A2N2F743_9DELT)

HSP 1 Score: 121 bits (303), Expect = 5.920e-28
Identity = 80/214 (37.38%), Postives = 106/214 (49.53%), Query Frame = 2

Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGI---RSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGP 1033
            +N LQ G + D G + E+ILGV  E+AT  D+ +LGKA   QL+Y++  P+  D +GEY A TLD+GI+       TH  +GPGRW GK           GYN+F     K                   +++GL                 S  D   + KLNY   G  N      MRDE+RK+ND LF+GLGY+   GGK N APF++ GP
Sbjct:   13 INILQKGGKYD-GRSMEKILGVAPEKATINDIKKLGKAEVFQLYYAATAPSFQDFNGEYTAATLDVGIMATSAEYYTHHFFGPGRWEGKAFYPFEKNKGYGYNIFKDATGKT-----------YRTRKMDTEIGL-----------------SDHDGKPAFKLNY---GAYNSGTVNSMRDELRKINDNLFIGLGYMALGGGKINPAPFLVIGP 194

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A847ZAA1_9DELT (Uncharacterized protein n=1 Tax=Smithella sp. TaxID=2053614 RepID=A0A847ZAA1_9DELT)

HSP 1 Score: 121 bits (303), Expect = 7.920e-28
Identity = 81/214 (37.85%), Postives = 110/214 (51.40%), Query Frame = 2

Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFY--SSPAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIR-SGSSEGY--NLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGP 1033
            +N LQ G   D G + E+ILGV  ++AT ED+ +L KA   QL+Y  S+P+  +  GE+ A T+D+GIL    A  TH  +GPGRW GK    +G + GY  NLF   G K                   +++G                 PS +D   + KL+Y   G  N      MRDE+R++NDRLF+GLGY+   GGK N APF + GP
Sbjct:   24 INILQKGGAWD-GRSMEEILGVAPQKATLEDIRKLNKAEIFQLYYAASAPSFQEFKGEFAAVTVDVGILASGAAYFTHHFFGPGRWEGKAFNPTGENRGYGYNLFQDAGGK-----------IYRTRRMDTEIG-----------------PSDYDGKPAFKLHY---GAYNSGTVHSMRDEIRRINDRLFLGLGYMALGGGKINPAPFALVGP 205

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A3N5IIR5_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3N5IIR5_9DELT)

HSP 1 Score: 114 bits (286), Expect = 1.680e-25
Identity = 77/214 (35.98%), Postives = 105/214 (49.07%), Query Frame = 2

Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFY--SSPAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKG---IRSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGP 1033
            +N LQ G + D G + E+ILGV  E+AT +D+ +L KA   QLFY  S P+  +L GEY A T+D+GI+       TH  +GPGRW GK    I      GYN+F     K                   +++GL                 S  D   + K+NY+     N      MRDE+RK+N+ LF+G+GY+   GG  N APFV+ GP
Sbjct:   24 INILQKGGKYD-GRSMEKILGVLPEKATIDDIKKLSKAEVFQLFYAASEPSFQELKGEYIAATIDVGIMATSAGYYTHHFFGPGRWEGKAFNPIEKDKGYGYNIFKDAEGK-----------IYRTRKMDTEIGL-----------------STQDGKPAFKINYSAY---NSGTVHSMRDEIRKINNHLFIGIGYMGLGGGSINPAPFVLIGP 205

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A7S2UWI1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWI1_9STRA)

HSP 1 Score: 114 bits (285), Expect = 6.630e-25
Identity = 77/218 (35.32%), Postives = 110/218 (50.46%), Query Frame = 2

Query:  389 LAGASLVNALQGGVRGD-LGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSSPAA---GDLDGEYRARTLDMGILHPITAIITHRIWGPGRWLGKGIRSGSSEGYNLFSPGGEKRNTXXXXXXXXXXXXXXXXSDVGLPS-DTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVME 1027
            LAGA++ N  QGG  G  LG + E+ILG P ++A+  D+ +L K  FMQLFY+SP     G + G +  + L +G+LH +T  IT  ++G G+W GK +   S  G NLF+                        S + +   DT  D          S++D       +Y     KN   +  MRDEVRKVND+L +GLG +  FGG  N+A FV++
Sbjct:   67 LAGATVCNIFQGGRPGHYLGQSQEEILGCPPKQASVADLEKLSKFEFMQLFYASPMVVLDGSVQGNWEGKILPIGVLHLVTKFITDYLFGAGKWCGKAVDPSSCTGINLFAQ---------------------DKSAISMREFDTCIDC---------SLYDGRPILLFSYKS---KNLFPYNTMRDEVRKVNDKLLIGLGSMSVFGGHLNSASFVLK 251

[Close]

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Match: A0A3A4Q0Y7_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A4Q0Y7_9DELT)

HSP 1 Score: 110 bits (276), Expect = 5.170e-24
Identity = 79/225 (35.11%), Postives = 112/225 (49.78%), Query Frame = 2

Query:  407 VNALQGGVRGDLGLTPEQILGVPAEEATAEDVSRLGKAGFMQLFYSS--PAAGDLDGEYRARTLDMGILHPITAIITHRIWGPGR------WLGKGIR---SGSSEGYNLFS---PGGEKRNTXXXXXXXXXXXXXXXXSDVGLPSDTRRDRPFRFSPYSPSVFDRGASS-KLNYAKAGEKNGPLFGGMRDEVRKVNDRLFVGLGYIQAFGGKYNTAPFVMEGPP 1036
            +N LQ G +   G T  QILGV  E A  +DV +L +   MQLFY++  P    L+GEY A+ L  GIL P +A+ TH ++  GR      W+GKG +     S +GYNLF+   PGG                           ++T R RP + +     V   G  S +++Y+     N  +   MRDE+R++N+ LF+G GY+   GG  N APF + GPP
Sbjct:   24 INILQAGPKIPDGRTMAQILGVAPETAVFDDVEKLSRKDKMQLFYAANTPDIRALNGEYEAKLLSGGILGPSSALFTHHVFPTGRVTPRTRWVGKGFKPNDENSGKGYNLFTRKKPGGT--------------------------AETLRIRPMKTALAVSKVGKDGKRSFQVDYSA---DNTGMIHSMRDEIRQINENLFIGAGYMALGGGPINPAPFALIGPP 219

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig681.6.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KM04_9PHAE	4.580e-114	59.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZY5_ECTSI	4.430e-98	59.94	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A5K7Z8H1_9DELT	1.470e-31	41.07	Uncharacterized protein n=1 Tax=Desulfosarcina wid...	[more]
A0A7C1GQ52_9DELT	1.180e-28	36.07	Uncharacterized protein n=1 Tax=Deltaproteobacteri...	[more]
A0A2N1TA87_9SPIR	2.540e-28	36.40	Uncharacterized protein n=1 Tax=Spirochaetae bacte...	[more]
A0A2N2F743_9DELT	5.920e-28	37.38	Uncharacterized protein (Fragment) n=1 Tax=Deltapr...	[more]
A0A847ZAA1_9DELT	7.920e-28	37.85	Uncharacterized protein n=1 Tax=Smithella sp. TaxI...	[more]
A0A3N5IIR5_9DELT	1.680e-25	35.98	Uncharacterized protein n=1 Tax=Deltaproteobacteri...	[more]
A0A7S2UWI1_9STRA	6.630e-25	35.32	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A3A4Q0Y7_9DELT	5.170e-24	35.11	Uncharacterized protein n=1 Tax=Desulfobacteraceae...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig681	contig	P-littoralis_Contig681:30588..37006 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D7FZY5
Model size	1754
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	chloroplast
Exons	4
Evalue	6.21e-102
EggNOG OGs	2EAKV@1\|root,2SGUA@2759\|Eukaryota
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-22_003620.1
Cds size	1023

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig681.6.2	prot_P-littoralis_Contig681.6.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig681 30637..36324 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791417.3014436-UTR-P-littoralis_Contig681:30587..30636	1680791417.3014436-UTR-P-littoralis_Contig681:30587..30636	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig681 30588..30636 +
1680791417.3603497-UTR-P-littoralis_Contig681:36324..37006	1680791417.3603497-UTR-P-littoralis_Contig681:36324..37006	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig681 36325..37006 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791417.314279-CDS-P-littoralis_Contig681:30636..31099	1680791417.314279-CDS-P-littoralis_Contig681:30636..31099	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig681 30637..31099 +
1680791417.327033-CDS-P-littoralis_Contig681:34285..34418	1680791417.327033-CDS-P-littoralis_Contig681:34285..34418	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig681 34286..34418 +
1680791417.3375046-CDS-P-littoralis_Contig681:35130..35422	1680791417.3375046-CDS-P-littoralis_Contig681:35130..35422	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig681 35131..35422 +
1680791417.3511062-CDS-P-littoralis_Contig681:36189..36324	1680791417.3511062-CDS-P-littoralis_Contig681:36189..36324	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig681 36190..36324 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig681:30588..37006+
coding sequence from alignment at P-littoralis_Contig681:30588..37006+

protein sequence of mRNA_P-littoralis_Contig681.6.2

>prot_P-littoralis_Contig681.6.2 ID=prot_P-littoralis_Contig681.6.2|Name=mRNA_P-littoralis_Contig681.6.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=341bp
MKHAALLITLRLVGSAASPPAAFVNPAATAAASPAFTTNRPELGDVSSPI
APQGSLQKQRHQQQHEQHSAHGQRNIVVASLGGSATSVAGVLASSTPSVV
SWLPTALATIVGVLAGASLVNALQGGVRGDLGLTPEQILGVPAEEATAED
VSRLGKAGFMQLFYSSPAAGDLDGEYRARTLDMGILHPITAIITHRIWGP
GRWLGKGIRSGSSEGYNLFSPGGEKRNTPPSKEDGGGGGGGGGGSDVGLP
SDTRRDRPFRFSPYSPSVFDRGASSKLNYAKAGEKNGPLFGGMRDEVRKV
NDRLFVGLGYIQAFGGKYNTAPFVMEGPPVNSFSGPNDSN*

mRNA from alignment at P-littoralis_Contig681:30588..37006+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig681.6.2 ID=mRNA_P-littoralis_Contig681.6.2|Name=mRNA_P-littoralis_Contig681.6.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6419bp|location=Sequence derived from alignment at P-littoralis_Contig681:30588..37006+ (Pylaiella littoralis U1_48)
ATCATTGCTACGGGAGTAAACTCTCCGCCGAAAACTCGACGTGGAGATCA
TGAAGCATGCTGCCCTCCTCATCACTCTTCGGCTCGTGGGTTCTGCTGCG
TCACCGCCAGCAGCGTTCGTCAATCCTGCAGCAACAGCAGCAGCATCACC
GGCCTTCACAACGAACAGACCGGAGTTGGGTGACGTGTCCTCTCCTATTG
CGCCGCAAGGATCTTTGCAGAAGCAGCGGCATCAGCAGCAGCATGAGCAA
CACAGCGCGCATGGGCAGAGAAATATTGTCGTGGCTTCCTTGGGTGGGAG
TGCTACATCCGTCGCCGGTGTCTTGGCGTCATCGACGCCGTCCGTTGTGT
CCTGGTTACCGACTGCACTCGCTACGATCGTCGGTGTTCTCGCGGGGGCA
AGCTTGGTGAACGCCCTACAGGGCGGAGTTCGAGGCGACCTTGGATTGAC
CCCAGAACAGATCCTGGGAGTGCCAGCAGAAGAGGCAACCGCGGAAGACG
TCTCTAGGCTGGGTACGTGGTGCTTGTTAGCTGGTTCGCTTGTGATGTCG
CACGAAGTTTTTCGTGTGTGTGCGTAGAAAGTGTGGGTAGGAGTCGGCAT
TGGTTCGACGAGAGGCTGATTGCTTCACTGATGTCGAAGTTCCAGCTTGT
TTCACTCGAACTTCTCCGGAGGTTCAACATGCACACAGCATTCGTCCCTC
GGTTCCACACGGAGAAGTTGTCCCTGTTCACGGCGATATCGACGTGACCT
TCCTCGCAATCATCGTTCTAACGCACAGGGTGGGGGGGGGGGGGGCTGCG
AGTGTTGCGCTGTTGTTGTGGTCGGGAGCACACGTTACAAACACAAGAGT
GGGCGTTTTCGCGAAACAACGCCCAAGATACCGTCATACTGGTATAAATT
TCCTACCACATGTTTTTCCCACAGGGAGTTGAGCAATGCATTCGTCGCTC
TCAAGACGAGGAACTGGAGTAGAGTTGCAACGATGACAAGGAGCAGTGCT
GCTTTACAACCCCGTACTCGTAGCGCACAAATAAAAAACAATGAAGCAAA
GCATTTTATCAGATGGTGAACAAAAGTGAGCTGATAAAAGTCGCAGCAAT
CGAAAATGGGAAACTGTGACAAAAAAATTGTGGCGGCCTCGTGCAGTCTT
TATGCATACAGCAGTAGGATGGTTTTAGGAGGCAGGCGGTTAACCGTTTA
CCCGATGGCTGAGTATGCTGCTCCTTCTCATTTGTCGTCGACTGGGTTGA
AAGTCGTGGGTTCGGATTCCAGAGTGCCCACTTCTTTTTCAGAAAGACCT
GTTCGTCAAAAGAAACACTCAATGAGGGCCCGGCTATGTATGTACAAAAA
AAGGGGAAACGACACAACAGGGTGCACACATGGGTGGAAAAAGCATCTGG
TTGTTCCAGGGAAGTCGGCCCTGATCACTTACCATCCAGGTGTCAGTGCC
GGAGAGTGTTGAGAGGTGTAGTCCCCACTCGGGTAACCGGCTATCCCTCT
TCCCGATGGCTGAGGAAGCTACTCCTTCACAGTGGGCTGTATCTCACACA
AAAGTCGTGTTTTCCTGTCGAAAATTTCGTAGTTCCGATCCGGCATACTG
TAGAACATGTCGTGCGTATGGAGATTTTCGATCGGCCGTTCTTGTGCCGA
TCGAGCGTTTTTTTTTTTGTTAGGTTGGTTGTGGAGCCGGTTGCAGAAAG
CTTTTCTTCTTGAAGAAGACTACGATGTAGCAGGAGCAGCAGCAACAGCA
GCAGGGTAGACTTTCGAGCGATGAGGCCAGTTTGCATTTTTGCTCATCCG
ACAACTCTCCAACGAAGGAAGCCACAGTCATGACAAAGCCATCCCCCGTG
AGCTGTGTGTTTGGTCCCTACTGTGTGGTGATCGTTTGTTTGGCACCTGA
AGGCGTCGCTAGGCCCGCGAACAAGTTGTTGATGATGTCAAACGAATCCG
AAAAAGAAAGGCGAAAAAGACCTGCCGCCGCTCCGCGCAAGTCTTTTTCA
CTCTCGAACGGATACAGCCACACCAATGACAGAGACATCTTCCACGAGCT
GGCTGAATGGCCCTCTTTTTAGTGGGGATGACTTGGGTTAGGGTTACACA
TGTACGTCGCAAAAAAAAGGCTGCTCGTGTTCACCACATGTGAAACTGGT
AAGAAAGACCTACCGTTCGGTGCTGCTGTACAGCTCTCTCTACTCTCTCT
CTCCCTCTCCCTCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCTCT
GCGTTTTTTTACACAATGCGATTGCCATGGGCATGATTTTTTTGCGAGTC
TACCGACGCTTCGCTGCCCCAAACGATCACCACACGGGAAAGACTATGTA
TGCGCTCACGGCAGACGCCTCTCCCATTTCTGTGGCTTCGTCAATTAGAG
AATCGCGAACGAAAATTCAAACCAGTGACATCGCAAAATGAGTGTACAAA
CTTAAAAAGCAATCGGCTGCTAGATGCGAAGTACCAGGCATTTAGCTACA
CGCTGTTGATGGTGCTGCTGGTGCTGAAGTTGGTTGCTGTTGCTGATAAA
CATGGAACGATGTGACGGCACACAAAGACAGACAGCCGACACATGCATGT
ACAGCAGCAGCAGCAGCAGCAGCAGTAGCAGCAACTCTCCCCATCTGCTA
CTGTTCTTCTTGCTTTTGGGTCCGTTACCTGTGGCTTGATGTGTGTGTTG
TGGTTTTGTTTGCGATACACGCACAGAGAAAAGATAGAAGCAAAGCCTTT
TCGATCGCAAGAATCAATCGGCCACCGTGTCGCGAAACCCTGAGATCTCC
GACAGGATTCTCATCGAAAACTTGCCGTCGGAAATCTCAGATCGAAAAAT
GGGTCACTTTCAATTTCGTAGGAGACCCCCGTATTACTCTGTGTCGGAAA
TGGGTAACTTTCAAGAGGAATTTTCGACCGCGTAAGAAACAAACAGGCCG
TGAGAGACGTTTTTTGCATGCAAAGCTCCTTCCTGGAGGCCACTCCACGG
GAGGTACTATACGCACACTTGAGTGTTGAAATGATTCAAGAAAAAAATGT
CATCACGGTTTTCCAGGCCAGACTGTACGGATACTCCTCCGTAAGCAATG
CAAAACATTCACCATCTCTCCATTTCCCGATTCCTGTGTACGGGAGGCGT
CCACGATCTTATTTTAGACTCTTTTCATACAAATGTTTTTCAATTGATAA
ACTCTACGGAATGTATCACCCCCCCCTGGTTGGATGTCAATGCCCGATTA
CCGATTGCAAGTCAAGAAGATCGCGCCAAAATCCAAACGATACGGTTTCA
GGAGGCCCTTAAGAGAAAGACAATCTAACGACACCGTTTTCACGCACCGG
CACTCTGTTAGCTGTAGAGATCGATCGCCCTGTCTTCGCGCCGGAAAAAA
AGGATCGTTTCGTATGATATAATATCATATGCAACCAACACACACACACA
TATGAGAGGTCACGCCGCAGCAGTGGCTTGCTCTGCAGCGTTGCATCTCA
AGTTAAGGTGCGTTTGACACGATCGCTATGATATGATAGGCCAATGCGGG
ACACTCCCAAACCAGGATCCGGCTGACGACTGGCGTCCCCACGCTGTTGA
TTGACATTTCTCCCCCCCCCCCCCCTTTCCCCATGGTTTGAATGATGTTC
CTTGTTCGGGCGCGTGTGGCTGAACTTGTGCTTCCCATGCATGACAAGGC
AAGGCGGGGTTCATGCAGCTATTTTACTCGAGCCCAGCGGCGGGAGACCT
GGACGGGGAGTACCGCGCCCGCACGCTTGACATGGGCATCTTGCACCCGA
TCACTGCCATCATCACGCACCGAATATGGGGGTGAGACTGAGATGCCGTA
TCATATTATAGCATATGTGTGTACAACTGCGTGAGTCTTGTTTTAAGAGA
GGCACGAGCAGGTTGGCGTCGCCGCTCCACAAGTTTGCTGCCAAGGAGCG
GCTTTGTGTTGTTGGGTGGGTATCATAAGAGAGGGACCAAGATTAGGCAA
GGTGTGTTTTCAGGCGGGCATTTTCCTTCCTTAAACTGTACTTCGAAGTA
CTATTTTCTCAAAACCTCCCCTGGTGTGTGTTATCGCAACGCCAACCCAT
CCTACGCAGGCCGAAGGCTATGAAAGGAGCGTGTAGGTAAAAGAGAACAC
AACCGCCTGAATGTGTGTGCCTGTAGTTTACCTGAAACATGTTGCATATC
GAAAAACGGAAATTTGAAACATTTCGTCCACTACGCCGTGCATTCGCTCG
CAACGCCAGTAAAACAGAGGCCGTATTACATGCCTCTTTTCGAAATCGGT
CTATGTTTTGGTCGTGAGTCCATTGACCAATCGACCCGCGAGCCGCCATT
TGTCCTCTTCGACGGCCACTGCTGGGTGCGTAGACGACGGTAATAACAAA
ACGTGCGGTACTTCTTCCGGAGCAAGCAAGCGAGGCCTTCTGTCTGTCTT
GTGTGGCCGGACGGCATCCACTTTCCGCTCGCTTTCGTGCCGACCTACCT
GCACCCCCGTTCCCGGCCTTGAATGTACCCACCCCATCCCCAGGCCAGGA
AGGTGGCTCGGCAAAGGCATCCGTTCGGGGAGCTCGGAGGGGTACAACCT
CTTCTCTCCCGGGGGCGAGAAGAGGAACACGCCTCCGTCGAAGGAGGACG
GTGGTGGTGGCGGCGGCGGCGGTGGTGGTAGTGACGTTGGTCTTCCGAGC
GACACTCGGAGAGATCGGCCTTTCCGGTTCTCCCCGTACTCGCCGAGCGT
GTTCGACCGAGGGGCCTCGTCGAAGCTCAACTACGCGAAGGCGGGTGAGA
AGAACGGACCGCTCTTTGGCGGCATGCGCGACGAGGTGAGAAACTTGTCG
GTGGTGGTGATGATGATGATGGTTATGATGGTTCTCGCGGGATTATATGT
ATCATATGATCACTGATCGCCAAAATCTACAACAGTCGGTCAAGCGCCGG
GCATAGAGCGTCTCTCCTTGTGCGATCCATACGATGCACGGCACAAAGGT
AGCCAACGAAGAGCTGGCTTCGACAAGCCGACACACAGGTTGGGTCGGCA
AAAAATATTTTCTTTGTGCGTCCGATGAAGTTCTTTTTGGTGAGCCGGTT
GTCGTAGTCAAAGGGCGAGGGAAAGGGTTGACTCAAGTCCTTACTCGCCG
AGCTGGCCGAAAGAGAAACGTGGCGTCCCGTCACATACAGTGCCCCCTCG
CGTAGGGTTCCCGTAGGATCAGCATCGAGTGCCGGATAACCCAGACATGT
TTGTTTTCCGTGTTCCGTACCTGCAAGCGGGGCGGGAAGGGGTGGTGGAC
ACGAATGTCTTGTCACCAAGCGCTCCTGGGCTCTCGAGGGACGCGTACGG
AACGCACCGCCACTCGAAAAACGATTCGCTTGCGTTCTAGATGCCAACAT
AAACGGTGTGGCGTGGTTCGCGGTAACCAGCAGACTTTTGCTGAACGGGT
GCCAAGTCTTGCCTTGTTCGTGCTGGTTTTTCCTCCACTTTTCCTGTGTT
TTTCCCAACACGGTTTCTAGCCTTGCCTTGTCCGTTTTGATTTTTCCTGA
ATGTTTCCTGGATTTTCCCTCTCTCTCTCTTTTTTTTTTCTCACGTTCTC
AGGTTAGGAAAGTGAACGACCGGCTTTTCGTGGGATTGGGCTACATCCAG
GCCTTTGGCGGCAAGTACAACACGGCTCCGTTCGTCATGGAAGGTCCGCC
CGTGAACAGCTTCTCCGGGCCCAACGACAGCAACTAGTGTTGCCCCCCCC
CCGCCTCGCAATGAAACAACGGGGTTTGATTCTCCATGCTGCTTGCTCGA
AGGTGTCCATATAAAAAAAAAAGTGTGGCATATAGAGAGCACGGGATGAG
TTGTTTACTATTGGTGTCCATGAAACAATAGGGTGGAATACGTATCCTCT
AAGCACATATAGGGAGGACGGACGGGATGGATAGAGGCTATTCTTTTGTT
TCGGGCTCGTTGGCATGACACACAAAAAAAGGATCAGGGAGATCAGGGTT
TCGAAACATGCGGCAAAAGTTGGTGGGAGTCATGGGCTACAGTAGATACC
TGGTATTATACAAAGGGTGCGTCATCGTCTGGTTCTGTTTCGCTGCGGTG
CCTTGGTTGTGTTGATTTGGTTTATCCTCGTGGACGACGAAAACAGGTCG
TCTTGTCTTGTGCCCTTGTCGAGTGTTGGTTTTCCACGTGACCACGGAAA
GCAAGTCGTCTCGTCCTGCACCTTACGAAGTAGTTGCGTTGGTTATAACC
CGACCATGAACGGAGTCGTCTGGTCTTATTGCCTTTGTCAGAATTGGGTC
ACCCCATGACCTTGTTTGTGCCAGTTTACCCCCCCATGACCACGGAGGGG
AGGACACTGTGCCCCCACGAAGGGGTCGAAAAGGAAAAGTAAAAAAGTGG
TTCGTTTCGTTAACAGGGG

Coding sequence (CDS) from alignment at P-littoralis_Contig681:30588..37006+

>mRNA_P-littoralis_Contig681.6.2 ID=mRNA_P-littoralis_Contig681.6.2|Name=mRNA_P-littoralis_Contig681.6.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1023bp|location=Sequence derived from alignment at P-littoralis_Contig681:30588..37006+ (Pylaiella littoralis U1_48)
ATGAAGCATGCTGCCCTCCTCATCACTCTTCGGCTCGTGGGTTCTGCTGC
GTCACCGCCAGCAGCGTTCGTCAATCCTGCAGCAACAGCAGCAGCATCAC
CGGCCTTCACAACGAACAGACCGGAGTTGGGTGACGTGTCCTCTCCTATT
GCGCCGCAAGGATCTTTGCAGAAGCAGCGGCATCAGCAGCAGCATGAGCA
ACACAGCGCGCATGGGCAGAGAAATATTGTCGTGGCTTCCTTGGGTGGGA
GTGCTACATCCGTCGCCGGTGTCTTGGCGTCATCGACGCCGTCCGTTGTG
TCCTGGTTACCGACTGCACTCGCTACGATCGTCGGTGTTCTCGCGGGGGC
AAGCTTGGTGAACGCCCTACAGGGCGGAGTTCGAGGCGACCTTGGATTGA
CCCCAGAACAGATCCTGGGAGTGCCAGCAGAAGAGGCAACCGCGGAAGAC
GTCTCTAGGCTGGGCAAGGCGGGGTTCATGCAGCTATTTTACTCGAGCCC
AGCGGCGGGAGACCTGGACGGGGAGTACCGCGCCCGCACGCTTGACATGG
GCATCTTGCACCCGATCACTGCCATCATCACGCACCGAATATGGGGGCCA
GGAAGGTGGCTCGGCAAAGGCATCCGTTCGGGGAGCTCGGAGGGGTACAA
CCTCTTCTCTCCCGGGGGCGAGAAGAGGAACACGCCTCCGTCGAAGGAGG
ACGGTGGTGGTGGCGGCGGCGGCGGTGGTGGTAGTGACGTTGGTCTTCCG
AGCGACACTCGGAGAGATCGGCCTTTCCGGTTCTCCCCGTACTCGCCGAG
CGTGTTCGACCGAGGGGCCTCGTCGAAGCTCAACTACGCGAAGGCGGGTG
AGAAGAACGGACCGCTCTTTGGCGGCATGCGCGACGAGGTTAGGAAAGTG
AACGACCGGCTTTTCGTGGGATTGGGCTACATCCAGGCCTTTGGCGGCAA
GTACAACACGGCTCCGTTCGTCATGGAAGGTCCGCCCGTGAACAGCTTCT
CCGGGCCCAACGACAGCAACTAG