mRNA_P-littoralis_Contig681.4.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig681.4.3
Unique NamemRNA_P-littoralis_Contig681.4.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: D7FZY6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZY6_ECTSI)

HSP 1 Score: 412 bits (1059), Expect = 5.050e-137
Identity = 195/240 (81.25%), Postives = 208/240 (86.67%), Query Frame = 3 
Query:  219 MPKIVAFDGKEVEYVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEWLREGDPVDGSSRL 938
            MPKI  FDG+EVEYVEVHDEPIHRRQFSNDYVYIYIAG RPGETSLWHRHSENTLYVCV H AAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPEN H SHFFAME+LRPP  C+SRAL+HRCYSLR EDSRPGLARVYDF+L+PGESTGPH   FSGVVLCLSDGGG LEA        VF G ELS+VGG+KW+DGPV  + RN+GGSVY+AFVVEWL  G  V+G SRL
Sbjct:    1 MPKIAVFDGREVEYVEVHDEPIHRRQFSNDYVYIYIAGFRPGETSLWHRHSENTLYVCVGHGAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPENTHNSHFFAMEILRPPPTCSSRALDHRCYSLRGEDSRPGLARVYDFRLKPGESTGPHTLGFSGVVLCLSDGGGSLEADGG-----VFAGGELSKVGGWKWIDGPVSANARNAGGSVYQAFVVEWLGGGHSVEGVSRL 235
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: A0A836CD60_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD60_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.950e-58
Identity = 106/235 (45.11%), Postives = 146/235 (62.13%), Query Frame = 3 
Query:  219 MPKIVAFDGKEVEYVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQ------VCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEWLR 905
            M ++V  DG+E++YV VH+EP+H+ QF N+YV+ Y  G+ PG+   WHRHSE++ YV +    A LNRP D+  +VH     D WW+M+K++P +HQ      VCLL E    + FFA+E+L+ P V +   L    Y++  E S+   ARVY   L+PG+STG HKW F GVVL LSDG    E          F   +LS+ G FKWV+GP++  V+N G +VY+A VVEWLR
Sbjct:    1 MTRMVTHDGEEIDYVSVHEEPMHKHQFDNEYVWCYRVGLEPGKMCKWHRHSEDSFYVALTDGKA-LNRPCDRPEYVHPIKQFDQWWSMAKTSPIIHQARYLPQVCLLAECPIAADFFALEILKSPPVTSDAPLNCPGYTVESEYSKD-KARVYQLSLEPGQSTGMHKWNFYGVVLSLSDGELSSEGDGSP-----FADGKLSKYGRFKWVEGPIEFSVKNEGEAVYKALVVEWLR 228
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: A0A836C8W9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W9_9STRA)

HSP 1 Score: 198 bits (503), Expect = 4.190e-55
Identity = 105/229 (45.85%), Postives = 135/229 (58.95%), Query Frame = 3 
Query:  219 MPKIVAFDGKEVEYVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEWLR 905
            MP I   +G+EVEYVEV+DEPIH+ QFSN+Y Y YIA I PGE+ +WHRHS+++ YV +  +  A+NRPTDK     +   GD WW++ K+   VHQVCL       + FF +EVL+ P V +   L    Y+L  +      AR+YD  LQPG+STG H W F   VLCLSDG    E          F    L   G +KWV+GPV   V+N G + Y A VVEW+R
Sbjct:    1 MPTISILNGEEVEYVEVYDEPIHKCQFSNEYAYCYIATINPGESCMWHRHSQDSFYVALA-SCEAINRPTDKPEGELNLKAGDKWWSLYKAKDMVHQVCLPGTCAAPAKFFGVEVLKSPPVYSESPLGGNAYTLL-DQFTIDRARIYDMTLQPGQSTGMHTWNFFATVLCLSDGELSTEGADSP-----FAFLGLRTYGQYKWVEGPVTFSVKNEGSAAYTAVVVEWVR 222
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: UPI001666FF46 (hypothetical protein n=1 Tax=Marinobacterium nitratireducens TaxID=518897 RepID=UPI001666FF46)

HSP 1 Score: 98.6 bits (244), Expect = 1.600e-19
Identity = 68/215 (31.63%), Postives = 97/215 (45.12%), Query Frame = 3 
Query:  255 EYVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEW 899
            +YV+V DEP H  +F N++V +Y     PGE SL+HRH E+T+YV V            +E  VH+   G       K  P +H+V    +     H    EV + P       LE   +SL    S     R+Y  KL+PGE+TGP  + FSG+ + +SD    +E         V      S +    W DGP+   + N G +   A + EW
Sbjct:   23 DYVDVIDEPQHFHRFENEFVRVYDVRFAPGEHSLYHRHDEDTMYVTVRDVIVHDQGYQAEEAQVHNLPAGLSLCRPHKGEPLIHRV--RNDGSGPMHMIGAEVKKLPETVAEAPLEAPFHSLLDNLSGAKRLRLYMIKLEPGETTGPVTYGFSGLTVSISDAN--VEYAEPGGSRRVISFSPGSHI----WHDGPITQTLTNKGQTALVAILGEW 229
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: UPI00166F5ED3 (hypothetical protein n=1 Tax=Marinobacterium nitratireducens TaxID=518897 RepID=UPI00166F5ED3)

HSP 1 Score: 97.4 bits (241), Expect = 4.010e-19
Identity = 67/214 (31.31%), Postives = 97/214 (45.33%), Query Frame = 3 
Query:  258 YVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEW 899
            YV V DEP H  +F ND+V +Y     PGE+SL+HRH E+TLYV V  A          E  VH    G       K  P +H+V    +          EV + P +  +  L+   ++L    S     R+Y  KL+PGE+TGP  + FSG+ + +SD    +E         V      + +    W DGP+   + N G + + A + EW
Sbjct:   24 YVGVADEPQHYHRFENDFVRVYDVRFAPGESSLYHRHDEDTLYVTVRDATIHDQTYQSDECQVHRIPAGLSLCRPHKGEPLIHRV--RNDGTGPMQMIGAEVKKLPEIVAAEPLQAPFHTLLENLSGARRLRLYMIKLEPGETTGPVTYGFSGLTVSISDAN--VEFADATGVRRVISFAPGAHI----WHDGPLTQTLTNRGETAFVAVLGEW 229
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: A0A506UAT6_9HYPH (Uncharacterized protein n=1 Tax=Martelella alba TaxID=2590451 RepID=A0A506UAT6_9HYPH)

HSP 1 Score: 95.1 bits (235), Expect = 2.740e-18
Identity = 69/216 (31.94%), Postives = 98/216 (45.37%), Query Frame = 3 
Query:  258 YVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFV--HHASPGDLWWAMSKSAPYVHQVCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEW 899
            +VEV +EP H  +F NDYV +Y     PGETSL+HRH+ +T+YV V  A    +     E     HH + G        S P +H+V    + L   H    EVL+ P + + + L   C++     S     R Y   LQPGE+TG   + FSG+ + +SD    +           F        G   W DGPV   + N G + + A + EW
Sbjct:   26 FVEVLNEPRHFHRFQNDYVRVYDVRFGPGETSLYHRHNIDTMYVTVNDAEVYDHTFQSDETTAKTHHLTAGLSMCRPHGSDPLIHKVRNDGDGL--MHMIGAEVLKLPDLVSEKPLSAPCHTQLDNLSGAERLRFYRIALQPGETTGEITYGFSGLTVSISDASVAVAEPGGSSRVLSFS------PGSHVWHDGPVTQMLTNVGETEFVAILGEW 233
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: UPI0015902AFA (hypothetical protein n=1 Tax=Martelella sp. HB161492 TaxID=2720726 RepID=UPI0015902AFA)

HSP 1 Score: 95.1 bits (235), Expect = 2.740e-18
Identity = 69/219 (31.51%), Postives = 98/219 (44.75%), Query Frame = 3 
Query:  258 YVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAA-----ALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEW 899
            +VEV DEP H  +F NDYV +Y     PGETSL+HRH+ +T+YV V  A         +  T K    HH + G          P +H+V    + L   H    EVL+ P + + + L   C++     S     R Y   L+PGE+TG   + FSG+ + +SD    +           F        G   W DGPV   + N G + + A + EW
Sbjct:   26 FVEVFDEPRHYHRFQNDYVRVYDVRFGPGETSLYHRHNIDTMYVTVNDAEVYDHTFQSDASTGK---THHLTAGLSMCRPHGGDPLIHKVRNDGDGL--MHMIGAEVLKLPELVSDKPLSAPCHTQLDNLSGAERLRFYRIALEPGETTGEITYGFSGLTVSISDANIAVAEPGGTSRVVSFS------PGSHIWHDGPVTQMLTNVGETAFVAILGEW 233
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: UPI00037123EA (hypothetical protein n=1 Tax=Marinobacterium rhizophilum TaxID=420402 RepID=UPI00037123EA)

HSP 1 Score: 92.8 bits (229), Expect = 1.500e-17
Identity = 70/215 (32.56%), Postives = 96/215 (44.65%), Query Frame = 3 
Query:  258 YVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLWWAMSKSA-PYVHQVCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEW 899
            YV+V DEP H  +F NDY  +Y    +PGE SL+HRHS +TLYV V +     ++    +  V H  P  L         P +H+V    E          E  R P V   R LE   ++   +  +    R Y   LQPGESTG  ++ FSG+++  SD    L          V  G      G F W DGP+   + N G + + A + EW
Sbjct:   23 YVDVKDEPRHVPRFENDYARVYDVRFKPGEHSLYHRHSVDTLYVAV-YDTRVFDQTYGADHGVTHELPAGLCGCRPHGREPLIHRV--RNEGAGLMQMIGAEHKRSPPVVAERPLEAPLHTPVADPFKGESIRCYQIDLQPGESTGLVEYPFSGLLVSFSDA--TLAVGDGRATQVVAFGP-----GTFIWHDGPIARQLHNVGKTPFRAVLGEW 227
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BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: A0A6N7FJN0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FJN0_9ACTN)

HSP 1 Score: 91.3 bits (225), Expect = 4.370e-17
Identity = 71/217 (32.72%), Postives = 97/217 (44.70%), Query Frame = 3 
Query:  255 EYVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCLLPENLHTSHF--FAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVLCLSDGGGCLEAXXXXXXXXVFGGQELSRVGGFKWVDGPVDVDVRNSGGSVYEAFVVEW 899
            EYVEV DEP HRR+F ++ V +Y   I PG+T+L+HRH+ +T YV V  A        + E     A  G          P VHQV     NL T+       E+   P V +  AL+   ++L  E  R  L RVY+  L PG STG  ++ FS + + L+       A              +   G   W+ GP  + + N G     AFV EW
Sbjct:   17 EYVEVRDEPRHRRRFEDELVRVYDVLIPPGDTTLYHRHTRDTFYVAVNEATVRDRTWGEDEAREGTALAGTAMCRPHLKRPLVHQV----HNLGTAEMRLIGAEIKASPAVTSEAALDAPGHALTLE--REPL-RVYELALGPGASTGDIEYRFSSLTVMLTI------ATLLVRHADGAARTMVHAPGDVVWLPGPAQLSITNVGEEPCRAFVGEW 220
[Close]
BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Match: A0A7S4KS54_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KS54_9EUKA)

HSP 1 Score: 84.3 bits (207), Expect = 1.330e-14
Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = 3 
Query:  258 YVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRHSENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLW-----WAMSKSAPYVHQVCLLPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFKLQPGESTGPHKWEFSGVVL 725
            +VEV DEP H+  F N+Y  ++ A I PG+TSL+HRHSENTLY+ ++ A A      + E   H A  G+++         +  P +H VC L      ++F  +EV       T   LE     +RRED       V++ K++ G+    H     G+V+
Sbjct:   29 FVEVKDEPYHQEFFENEYTRVFYAKIPPGQTSLFHRHSENTLYIVLDDAKACDRIAGEHEINFHDAIRGEMFARTHVHPSGEHTPLIHAVCNLGGE--ATNFLGIEVKTQQASQTPPVLEESRGYMRREDLVSPSFSVFELKVEGGKELPEHPLPNRGLVV 187
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig681.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FZY6_ECTSI5.050e-13781.25Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CD60_9STRA1.950e-5845.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8W9_9STRA4.190e-5545.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001666FF461.600e-1931.63hypothetical protein n=1 Tax=Marinobacterium nitra... [more]
UPI00166F5ED34.010e-1931.31hypothetical protein n=1 Tax=Marinobacterium nitra... [more]
A0A506UAT6_9HYPH2.740e-1831.94Uncharacterized protein n=1 Tax=Martelella alba Ta... [more]
UPI0015902AFA2.740e-1831.51hypothetical protein n=1 Tax=Martelella sp. HB1614... [more]
UPI00037123EA1.500e-1732.56hypothetical protein n=1 Tax=Marinobacterium rhizo... [more]
A0A6N7FJN0_9ACTN4.370e-1732.72Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
A0A7S4KS54_9EUKA1.330e-1432.92Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig681contigP-littoralis_Contig681:23654..30468 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog159749.K0TLE6
PFAMsNAD_binding_11,NAD_binding_2
Model size2237
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.2e-08
EggNOG OGsCOG2084@1|root,KOG0409@2759|Eukaryota,2XBBI@2836|Bacillariophyta
DescriptionNAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Cds size723
COG categoryI
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791417.215309-UTR-P-littoralis_Contig681:23653..249491680791417.215309-UTR-P-littoralis_Contig681:23653..24949Pylaiella littoralis U1_48UTRP-littoralis_Contig681 23654..24949 -
1680791417.267525-UTR-P-littoralis_Contig681:30250..304681680791417.267525-UTR-P-littoralis_Contig681:30250..30468Pylaiella littoralis U1_48UTRP-littoralis_Contig681 30251..30468 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791417.2270012-CDS-P-littoralis_Contig681:24949..254561680791417.2270012-CDS-P-littoralis_Contig681:24949..25456Pylaiella littoralis U1_48CDSP-littoralis_Contig681 24950..25456 -
1680791417.2379897-CDS-P-littoralis_Contig681:26515..266121680791417.2379897-CDS-P-littoralis_Contig681:26515..26612Pylaiella littoralis U1_48CDSP-littoralis_Contig681 26516..26612 -
1680791417.253392-CDS-P-littoralis_Contig681:30131..302501680791417.253392-CDS-P-littoralis_Contig681:30131..30250Pylaiella littoralis U1_48CDSP-littoralis_Contig681 30132..30250 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig681.4.3prot_P-littoralis_Contig681.4.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig681 24950..30250 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig681.4.3

>prot_P-littoralis_Contig681.4.3 ID=prot_P-littoralis_Contig681.4.3|Name=mRNA_P-littoralis_Contig681.4.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=241bp
MPKIVAFDGKEVEYVEVHDEPIHRRQFSNDYVYIYIAGIRPGETSLWHRH
SENTLYVCVEHAAAALNRPTDKEPFVHHASPGDLWWAMSKSAPYVHQVCL
LPENLHTSHFFAMEVLRPPVVCTSRALEHRCYSLRREDSRPGLARVYDFK
LQPGESTGPHKWEFSGVVLCLSDGGGCLEAGGGGGGGGVFGGQELSRVGG
FKWVDGPVDVDVRNSGGSVYEAFVVEWLREGDPVDGSSRL*
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mRNA from alignment at P-littoralis_Contig681:23654..30468-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig681.4.3 ID=mRNA_P-littoralis_Contig681.4.3|Name=mRNA_P-littoralis_Contig681.4.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6815bp|location=Sequence derived from alignment at P-littoralis_Contig681:23654..30468- (Pylaiella littoralis U1_48)
TGTGCTGTGTGCTGTGCTGTCCTGCTGTGCACTCTCGAGCGGTGTCGCTC
TTGGTTTCGTCAATCTTTCGCAGAGGATAAAAGCACAGCGTGCGCCTGCG
TGTGCCCACTTTCATACCGTCGCAATTCCGGATTCCTCGCAGGGTTAAAA
TATAGAGGCGCTTCTCTGGATCACAAAAATATAAAAATATTAGAATTTTT
TTGTTCCGACAGATCGGCATGCCGAAGATAGTAGCTTTCGACGGGAAGGA
GGTGGAGTACGTCGAGGTGCACGACGAGCCAATCCACCGGCGACAGTTCA
GCAACGACTACGTCTACATTTACATCGCGGGCATTAGGCAAGTCTTACGA
AATGCCTCGGGTGCATGCACCCGCTCCAGTCCAACGCTACTACTACCGCT
GAGTGCTGAGTAGTGGTGGGTATATCTGTTGTTCTCACTTGAAGTTTTTT
TCGGTTGAACCGGAGACGATGACGAGCTGTTTTCTCAGGAGCATATTTCA
TAAAGTACGAAGTATTTCCCATCTATGACCTTCCTTCTGTGTGACCCCGG
CTGATGCACCCACTTCATACCGAAAGGTGTAGACTGGTGCCCCGAATAAA
TGGGATCATAACGCACACGCACTAATCATGTGCTGCAGCAGCTCCCGCAA
TGTCGGGTTCCTTGTTCTCACTGGTACAGGTGGTCATGCCTGGCACCTTT
ATACTGTACCCAATCTCAACACTTTGTCCCGATGCCCGGTCGCACGATAT
GAGGGCGGGTCTCGTCATCACGATCAGCAGAGTAGGTACACCCATCACGA
TCAGTAGAGTAGGTACACCCATATGAGTGCCGGTTGAATAGTGCCAACTG
CGGATGTAGTGCCGGTGAAAACCGCTTGTCAAATATTGAACCCTCAGTAG
TGCCATGTGGCACTACTGAGGACGATGCAGGTATAGTGCCGGTTGGGCAC
CGTTACCTCAGTACAGTACCGGCCCGCTCACAAGAAACACTTTTATAAGA
AAGGGAGGCGGGAATTTTTCAAAAATGAAGAAATTTGGCGTAAGAAAATG
GGCTCGGCAGCCGGCGCCACACTAAATCCTATACGATGGTTAAGAAATAG
CCATACTTAATGCTGGTGACACAACAAGAAGCCAAGGCTGAGGCTGATTT
CCAGTTTCTTATAAGCGGGCCGGTACTGTAGTGCCGGTTCAGGCCAGGTT
CCACCATCAGCACTACTGCTTTACAGCTACCGCACGACACCAGCAGCAAT
ACACCGTCACACATACTCTGTTGTGTACACACGCGGTAGAGGCAGACCAT
GCCTTGTGCAAAAGGGAACTTTGTCGCCATCCAGAGAGCAGAGTCATGAC
ATAGTGTCGTAGCTCGTTCAAAAATATGGCTGCTACAGCAGCATCCGAAC
CTAGTCTCGTAGCTCGCAGTACTCGATGAAGGAGGGCTCGTTTCAAAAAT
CGCAAGCGGTGAATCTGTAGCATGTCGCAAGGACTTGGATCTTGGACCCA
AGACACTAGTCATTGCTCACAGCGACTGCCTCCGGGAGCATCCTGCGGTG
GTAGATTCGTACTAAAGATGGACTTTGAAAAAACACCAGAATAATCAGGA
GTTTGTCGAGAGCCTACAAGTTTTTTGCACCCCGTTCCCCGGTGGCCTGA
AGTGTGGTACTCGTATCATATCCTATTCTTGGCGTCCTCGGGGTGTCCTC
TGTAGCTGCACACACCTTTTGTGCTTACGGTATCACAGTACACAGTTGTT
GTGCTCTGTGGTGCGTTGTGACCGCCGGGAGAAGTACAGTTAGTGCCCAG
CCCGTGCGCTATATGAAGAAAACAACACTTCGGAGTGTTGTTGTTTCACC
ATACGCTGAGTACGTGTGTGTGTACATGCCCGTGCCCTCAATAAACTCTG
GTTGGCCCAGAACACGTACGATTATACGTGTAGTGCTCTAATATTCAATG
AATCTTCAGTAGTGCCAGTACTGGCACTAATGAGGAATTTCAACCCCCCC
CAGTAGTTCCTTTGTGGCACTATTGGCAATAGTGCCCCTCTGCCGAAACA
GTGCCAACATTTTCGGCTGACACGTACCGGCACTATATTGGGTACCTACT
GTACCTGATACATTTCCGAATAGAAATCGAACTCTGAAAATCGAAAGTTG
AAAATCGAAAATCGAAAATGTAACTGGTTGACCGAAATTCCCTCAGCCGC
ACCCAGCGGATGTTGGACTTCGACCTTGCTTTTTGTTCCGACAGCTGGGT
CTGTTTCAACGGAAAGTTGCACCTGAATGGGAAACCAAAATTGGAAATCT
AATTCGCTTTCTAGCATTAAAAAACACGATGTTGCGTTAACGTGTATCTA
GGCCGGTGGGATTTGTTGGGCATTTGCAGCTGGTCTACGTTCCAAAAGAT
AGATGTGATATGATACTTCGTATACATGCAACACAAGGAAACAACTGCAG
TCGTCAGGCGGCTGGACACCAGCGTCGGCTACACAAACAAAGTTGTGCTA
CTGCTGCCGTCTGTAGAAGGCATGCACGCGCACGTATTCCCTTGCACCCG
CCGAGAAGCCGCGGAGGCGCCGAACTCAGCAGACGGGGCACTACCCGCTG
CCAGCTCTCAATAGTTCATATCAGCCATCGGCACGTATCATATGTGTGAG
GGTGTATGGGCACGTGTGTAGAAGGTATGCAGATGCGCCCCTCTGCTGGC
CTGCGTATGGCAGCAGCAGCTACTCGCTGCTAGCTGCATATCATAGATGC
GTATTGCCTGTCTCCTTGTATGGAAATGTACTCCTGTATAGCTTTCACAC
ACTGCCATTTCATCACCCCGCCTTCCCTTTCTTTCACGAACTCCCTCGGG
CATTCCTATTCCGATTCGTTGGATTCCAAAATCAACTTCCCGAGAGGTCA
ATTTGTTTTGACAGAAAAAGCTAGCCCCGTGGGATGCAAAAGCTAACCCC
GTGGAATGCAAAAGTTGATTGACCAATCAGAGGCAATTCTAATTCCAATC
AGCATTCCAATCCGGGTGTCACATTTTTCGTTGGGACAGGCCCTAATCGA
AAGGTTCAAATCGAAATAACCAGAGTTTCGGTGCAAGTCAACATGTCTTT
GCTTCGTTGGATATAGCATAACAGGTAGACCCCCGCTGTACATATGTGAT
ATGTACCTCTGCAGAAAGCTGGCATCTCGTCCAGTAGAGCACTTGTACAA
GCAGGCTGGTAATAATTCAAAGAGCAGAAATTTTCTGCGAAACGGCTGGT
CACTGGACTGAAAGAGCGCTTTTTTGCCGTGCATTTGGAAGACATCGGTA
TGCCATTTCTCACAAGGCCACGCCACAACGTTTAAGTACTTGCCGCACTT
GCGATACCCCCACTCAAAGCTCGTATCCCGTAGAGCAAGAGTCATTTATC
AGCTGTATTTGTGACCTCCATACAGCAAGAGAGTGGTATTCGGTCGGCTA
TGTGCAACACGCAATTACACATATCTTGCCGGGTTTTCGGGTATCGGCCC
CAAACAAGGGAGTGCCAACGCGCCTTAGTCAGGTCGACGTGGGGCACTAT
CGCGCACTACTTTTGAGGTACCGTAGCTCCCGCACTAGTCTTGGCATCGT
CGGGGCATGCATTTCGCGACCATCTGTCTCTTGACTTGCTGGTCGCTCCC
CCTCCTTTCCGTCGGTTCTCGGTTTTAGATTTTCGATGAACGCAGCTGCG
GCACATCGGACACAACTCGATTTCTAGAATCGAAATCAAGTTTCGATTTA
TATTTTCTGTTCGGATATTTCTCGGTGACAAGTGACAAGACCCACCCTGA
CCCTCGATCCCGCCCTCGTCGCTGCTAATGTTTCGCCGGATTATTTCAAC
AACCAGGCCCGGTGAGACTTCGCTGTGGCACCGCCACTCTGAGAACACTC
TTTACGTGTGCGTAGAACACGCGGCGGCAGCACTCAACCGCCCGACCGAC
AAGGTATGGTACGCGGGTTTCTCCTCTTTCATGATGCACGGACATGAGAC
CAAACTATACCACCAAAAAGCAGCGCTCATGCGTATATGTTCACGTCCTT
GCATCGGGCAGGATCAAGAGCAAGCACCTGGTCAAGAGATAGTTGGTACG
TAGAGGCTTCCCTCCCTGCAAAACTCTTCTCAAAGCAGGAGTAGGTTAAC
CCTTCGTTGTTCTGCTGCTCCTGTTTTCAAAGCAGAATTCCCCTCTCAAT
ATTGCCGAAACTCGTCGCTTTTGTCTGCCTTATCAGCAGTGTGCTGTGCG
TTCCAACCAAATTTGGCATCTGTTGTACAATAACAGTGCAAAAGGACGTT
TATATTGTTGCTACTGCAAACATCTTTACTCCAACATCATGTTCCACGCA
CGGACCGTTCAGGCGGTCGGTACCCATTCCCCTGACTGAATCATATTTTA
ACGGCCGGTTGTCTTGGCAACGGGAATGTTGCACGCCAATGAGCCGTTTC
GGTCGAGAAGTCAACGATGATATGACTGTTGTCGAGATATCCCCCCGAAA
CTCTGCATCGTGTTTGGTATCTTTCTCCTCAACGTGGACGCCATCGTCCA
TGGAAAATTCAGGCGGAGGGGGGGGCATCTGCAGTACCCGTCACCAGAGA
CGGGTGCTTCGCAATATAGGAATGCTAGTACGTAGCGCGTGCGCGTGAAT
ACTGCGGGCGGCACGGTACCTTCGGGAAGTCAAGACCAGATTCAAGGGAC
TTTCGTGGGGGATCGTGGTTCACCCGGGGTGTTCGTGTATCGTTTGCTCA
TCGAAAGGCGTCTGTTTTGGGCTGGTGTTGTGTCACTCTCGAGAAAGAAA
GCCAGATCGACCTCTCTTCCCGATTCCACCCTCGTGGCCGCACGCAAGAA
AAACGCCTCTTCGCGAACCCTCGAGTTCTAGGATGTTTCTGCATTGTGAA
CATTACGAATACACCTCGCCCTCAATGCGCGTAGTGTCCAAAATTTCATC
CTACTGCTTGCGGTCGATCTCCCGCACTCCGTTCGTTTCGTGCACCCCCG
CCCCACCCGCAGGAGCCTTTCGTGCACCATGCCTCTCCTGGGGACCTCTG
GTGGGCCATGAGCAAGAGCGCCCCCTACGTGCACCAGGTCTGTCTCTTGC
CGGAAAACCTGCACACCTCGCACTTCTTCGCGATGGAGGTCCTCAGACCG
CCAGTCGTCTGCACGAGCAGAGCCCTGGAGCACCGGTGCTACAGCCTCCG
GAGGGAGGACAGCCGCCCGGGGCTCGCGCGCGTCTACGACTTCAAGCTAC
AGCCCGGCGAGTCCACGGGGCCCCACAAGTGGGAATTTAGTGGCGTTGTG
CTGTGCCTTTCAGATGGCGGGGGTTGTTTGGAGGCTGGAGGAGGTGGCGG
CGGCGGAGGCGTGTTTGGCGGGCAGGAGTTGTCGAGAGTTGGAGGGTTTA
AGTGGGTCGACGGCCCCGTCGATGTCGACGTGCGTAACTCCGGCGGCAGC
GTGTACGAAGCCTTTGTGGTGGAGTGGTTGAGGGAAGGCGACCCGGTGGA
CGGATCGTCCAGGCTTTGATATTTTTAGGGGCAGAGGGGGCCCCGTGTCG
CGCGCCATCTGCCGGGAAATAGGGCGATCGTGTACCTGTTAGTGTGATGT
GTGCATGTACGTTTGATAGTGTTCATTTCGAGGTGTGGGAGACACAAAGA
CGCTCGGTGGAGATGCTCGTCGTCAGGGTGCACTGGAGGGTGTTTCGACC
AGCGGATTACGTCATATCTGTCATGATTGGGCTTGGTTTGCTCCTTCGAA
GGAGTTGGTTTGTTGTGTTGATAAGACACAGAATGTTCTTGAAGGGTGGG
CGATCGGCCTATTTGTCATCCGCATTATTTCAGAGATCCTACGACGTAGG
ACACAACGAACGGTTTCTTCCGTACATTGTTGCCTCTGAGCACAACAGGG
CGTTTGTGGGAGAGAAAGGTGATCGGGAGGTCATCGTGTGCAGAGCGAGA
GGAAGCAGACTTTAATTTTTTGGTGGTGAGCACAAGAAGATAGCATAACA
TTCGGAGCTTAGTAGCGATTCGACTAGGTTTGAATAGAAATAACAACGCA
CCGCTCGCGCCCGTGGGCTTTCAACGCCAAGATAGCGGTTTCGGGCTTGC
GTATGGTCTTCAGGCTCTCAGGAAACGGGGCAACCTCGCCGGGTACCGCT
TGTGACACACACACCTTGCGTATTTTCTGGATCATTAGGAGATGAGTGAT
GGCCATTTTTTGTTGTAGGAGGTTCAACCGGCTCTGGCTACATATTGGAA
CGAGTTTGTATGCTGTTAGTCTACAGCAGACAGCGAGCACCTGTTAGAAT
TGCGAGTCGGCAGGGTCTCGTGTCAAGGGCTGCACATGGACTGCGGCGAA
GCCGTGACCGTAACTGCACCCTATCGCCACTTCAGATTTTACGCCGATGT
TTTGGCATAAGCTTCGCAGTATGTGCCCCGTACTGAAAACGTGCACAAGG
CATGATACATGCATATTCAGGTGTGTGAGACGCCGAGCATGGGAATCTCT
CCGGTGAAGTCGGCAAGACCTCTGCTTCGAATTTTCGATACGAGTAGGTC
GATTTTTTAGCCGAAGTAGAGATAGATACTTGTACTGCTGCAAGAGAATG
TATGACTCTCTTGATATGATAAGGTTTGAATCATCTCTTCATAAACTTCA
AAGTAGTTCGTTGATTCCCTACTCCTTTGCATGAGGGATGATTGCAGTAC
TGTAATGTCGTTTTTATTTGCGGGCGCTTCCTTGAACTGAGGGATGCAAC
AAAAATACTCCGGAGTATGTCTGGATTACTGACACTGAGCTCCCGCCTGT
AGGAGGCGACTTCAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig681:23654..30468-

>mRNA_P-littoralis_Contig681.4.3 ID=mRNA_P-littoralis_Contig681.4.3|Name=mRNA_P-littoralis_Contig681.4.3|organism=Pylaiella littoralis U1_48|type=CDS|length=723bp|location=Sequence derived from alignment at P-littoralis_Contig681:23654..30468- (Pylaiella littoralis U1_48)
ATGCCGAAGATAGTAGCTTTCGACGGGAAGGAGGTGGAGTACGTCGAGGT
GCACGACGAGCCAATCCACCGGCGACAGTTCAGCAACGACTACGTCTACA
TTTACATCGCGGGCATTAGGCCCGGTGAGACTTCGCTGTGGCACCGCCAC
TCTGAGAACACTCTTTACGTGTGCGTAGAACACGCGGCGGCAGCACTCAA
CCGCCCGACCGACAAGGAGCCTTTCGTGCACCATGCCTCTCCTGGGGACC
TCTGGTGGGCCATGAGCAAGAGCGCCCCCTACGTGCACCAGGTCTGTCTC
TTGCCGGAAAACCTGCACACCTCGCACTTCTTCGCGATGGAGGTCCTCAG
ACCGCCAGTCGTCTGCACGAGCAGAGCCCTGGAGCACCGGTGCTACAGCC
TCCGGAGGGAGGACAGCCGCCCGGGGCTCGCGCGCGTCTACGACTTCAAG
CTACAGCCCGGCGAGTCCACGGGGCCCCACAAGTGGGAATTTAGTGGCGT
TGTGCTGTGCCTTTCAGATGGCGGGGGTTGTTTGGAGGCTGGAGGAGGTG
GCGGCGGCGGAGGCGTGTTTGGCGGGCAGGAGTTGTCGAGAGTTGGAGGG
TTTAAGTGGGTCGACGGCCCCGTCGATGTCGACGTGCGTAACTCCGGCGG
CAGCGTGTACGAAGCCTTTGTGGTGGAGTGGTTGAGGGAAGGCGACCCGG
TGGACGGATCGTCCAGGCTTTGA
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