prot_P-littoralis_Contig117.140.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig117.140.1
Unique Nameprot_P-littoralis_Contig117.140.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length38
Homology
BLAST of mRNA_P-littoralis_Contig117.140.1 vs. uniprot
Match: A0A6H5J7J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J8_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 8.570e-8
Identity = 24/36 (66.67%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 EAIPLLKRALSIRTKKLGEDHPYTVRTRNRLEIVRK 36
            +A+PLL+RALSIR KKLGE+HP TV T+N L++VR+
Sbjct:    6 DAVPLLERALSIRMKKLGENHPDTVSTQNSLDVVRR 41          
BLAST of mRNA_P-littoralis_Contig117.140.1 vs. uniprot
Match: D8LKS1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS1_ECTSI)

HSP 1 Score: 45.4 bits (106), Expect = 3.890e-5
Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    1 EAIPLLKRALSIRTKKLGEDHPYTVRTRNRLEIVRKEV 38
            EA+PLL+RA SIR KKLGE+H YTV T+  LE V+K V
Sbjct:   24 EALPLLERASSIRGKKLGENHHYTVDTQISLERVQKHV 61          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig117.140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7J8_9PHAE8.570e-866.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKS1_ECTSI3.890e-565.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..37
e-value: 3.0E-8
score: 35.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig117contigP-littoralis_Contig117:476938..477051 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig117.140.1mRNA_P-littoralis_Contig117.140.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig117 476938..477051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig117.140.1 ID=prot_P-littoralis_Contig117.140.1|Name=mRNA_P-littoralis_Contig117.140.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=38bp
EAIPLLKRALSIRTKKLGEDHPYTVRTRNRLEIVRKEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf