prot_P-littoralis_Contig680.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig680.9.1
Unique Nameprot_P-littoralis_Contig680.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length297
Homology
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BLAST of mRNA_P-littoralis_Contig680.9.1 vs. uniprot
Match: A0A6H5JBG8_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBG8_9PHAE)

HSP 1 Score: 290 bits (741), Expect = 1.780e-94
Identity = 152/188 (80.85%), Postives = 161/188 (85.64%), Query Frame = 0 
Query:  117 LAPTHEALERERKRVEIERRRAEVAV--------------KANEKLQKELGTVKTGIARALRENEQYQSKARRVTLPRRCREKGQKPDQPIEMAALHL-SMHDQVPFVWLKEHFEVEEKPSQIEGHGAFLKRGASKGTTVHTSVLPSSEFNDDFTMEQYDCCYHVMHGDKSGVVYIDPGALFRGNLIG 289
            LAPT EA ERERKRVEIE+R+AE AV              +ANEKLQKEL TVK GIARAL EN QY SK RRVTLPRRCREK Q+PDQP EMAALH  SMHD+VPFVWLKEHFEVEEKPSQIEGHGAFLKRGASKGTTVHTSVLPSSEF+DDFT+EQYDCCYHVMHGDK+GVVYIDPGALFRGNL+G
Sbjct:   12 LAPTQEAFERERKRVEIEKRKAEDAVAARDAAEESGRKAFEANEKLQKELETVKAGIARALTENGQYISKPRRVTLPRRCREKAQEPDQPKEMAALHFRSMHDEVPFVWLKEHFEVEEKPSQIEGHGAFLKRGASKGTTVHTSVLPSSEFSDDFTIEQYDCCYHVMHGDKNGVVYIDPGALFRGNLMG 199
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BLAST of mRNA_P-littoralis_Contig680.9.1 vs. uniprot
Match: A0A6H5JRX6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRX6_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 9.960e-34
Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 0 
Query:   16 STANYGHGGKRTHCQPYGERGMTGPR-QMIVSALQPSVWPEKXXXKASTTAGAGGVLDVAKAAFLAAAGSAGAVGQSGG 93
            STANYGHGGKRTHCQPYGERGMTGP+ QMIVSALQPSVWPEK    ASTTA AGGVLDVAKAAFLAAAGSAGAVGQSGG
Sbjct:   90 STANYGHGGKRTHCQPYGERGMTGPKGQMIVSALQPSVWPEK----ASTTAAAGGVLDVAKAAFLAAAGSAGAVGQSGG 164
[Close]
BLAST of mRNA_P-littoralis_Contig680.9.1 vs. uniprot
Match: A0A6H5JS80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS80_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 2.340e-5
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0 
Query:  104 MSSDFPAVEQPGSLAPTHEALERERKRVEIERRRAEVAVK 143
            MS D PAVEQ GSLAPTH+ALERE  +VEIERR A  AV+
Sbjct:    1 MSGDLPAVEQSGSLAPTHQALEREGGQVEIERREAGDAVR 40
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig680.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JBG8_9PHAE1.780e-9480.85SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JRX6_9PHAE9.960e-3491.14Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JS80_9PHAE2.340e-572.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..151

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig680contigP-littoralis_Contig680:16169..17421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig680.9.1mRNA_P-littoralis_Contig680.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig680 15865..25961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig680.9.1 ID=prot_P-littoralis_Contig680.9.1|Name=mRNA_P-littoralis_Contig680.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=297bp
MINLLLKVCAHSGCTSTANYGHGGKRTHCQPYGERGMTGPRQMIVSALQP
SVWPEKWPEKASTTAGAGGVLDVAKAAFLAAAGSAGAVGQSGGDDGVVVP
DVDMSSDFPAVEQPGSLAPTHEALERERKRVEIERRRAEVAVKANEKLQK
ELGTVKTGIARALRENEQYQSKARRVTLPRRCREKGQKPDQPIEMAALHL
SMHDQVPFVWLKEHFEVEEKPSQIEGHGAFLKRGASKGTTVHTSVLPSSE
FNDDFTMEQYDCCYHVMHGDKSGVVYIDPGALFRGNLIGVPGGHGK*
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