prot_P-littoralis_Contig68.111.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig68.111.2
Unique Nameprot_P-littoralis_Contig68.111.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length304
Homology
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: D7FYA5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYA5_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 1.690e-92
Identity = 153/171 (89.47%), Postives = 162/171 (94.74%), Query Frame = 0
Query:    1 MGNLMSRKKKRERAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELDAETA 171
            MGNLMSRKKKRER HVTDQDRAVLDLKNSRDRLTRYQKKLDLEC KLQAQA  MVKEKRKDRA+LLLK+KKLKQDQADKASSQL +V Q+M+TIDWE+QQLQVFNALKEGN ALN LHEEMPLDKVEELMADTAESIAME+EISKAIGGSWTDANEEDLLAELAEL++E A
Sbjct:    1 MGNLMSRKKKRERDHVTDQDRAVLDLKNSRDRLTRYQKKLDLECAKLQAQAAAMVKEKRKDRALLLLKIKKLKQDQADKASSQLLSVHQMMDTIDWETQQLQVFNALKEGNVALNKLHEEMPLDKVEELMADTAESIAMEEEISKAIGGSWTDANEEDLLAELAELESEAA 171          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: A0A836CK96_9STRA (Snf7-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK96_9STRA)

HSP 1 Score: 167 bits (424), Expect = 2.830e-47
Identity = 91/164 (55.49%), Postives = 119/164 (72.56%), Query Frame = 0
Query:    9 KKRERAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELDAETAA 172
            K + R HV+D D+AVLDLK +RDRL RYQKKLD E   L  QA  +VKE RKDRA++LLK+K+ K +QA KA +QLFTV +L+ET++WE  Q QV  AL EG  ALN+LHE MP++ VE+LMADT E++  EQ+++  I G+W+  NE++LL E   L  E AA
Sbjct:   16 KVKNRPHVSDHDKAVLDLKVARDRLKRYQKKLDGEAQMLTTQAQALVKEGRKDRALVLLKIKRFKAEQASKADAQLFTVTELLETVEWEGHQAQVLAALSEGTKALNSLHEAMPIEDVEQLMADTQEALEYEQQVNSIIAGAWSPENEDELLEEFEALQKEMAA 179          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: H3H1K0_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H1K0_PHYRM)

HSP 1 Score: 138 bits (348), Expect = 5.470e-36
Identity = 75/155 (48.39%), Postives = 112/155 (72.26%), Query Frame = 0
Query:   13 RAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELD 167
            RA +T +D+A+LDLKN+RDRL +YQ +LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L  V  +++T++WE+QQLQVF  LK GN+ LNA+H+EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE++
Sbjct:   28 RAQITSKDKAILDLKNARDRLKKYQARLDIEANQLHDSAKRLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMMETEEAQATANEISRVIGGSLTVEDEDAVLSELAEIE 182          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: A0A4D9D5S7_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5S7_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.070e-35
Identity = 83/175 (47.43%), Postives = 121/175 (69.14%), Query Frame = 0
Query:    1 MGNLMSR-------KKKRERAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELDA 168
            MG L SR       K  ++   +TD D+AVLDLK ++DRL RYQ K+  E  +L  +A  +V   RKDRA+L+LK+++L++D+  KA+ QL  V+QL+  I+WE +QLQVF+ALK GN AL A+H+ + L++V++LMADTA+SIA EQEIS+ +  + +   EE++L E  EL A
Sbjct:    1 MGGLFSRHGRHHGGKSPKKPVQITDHDKAVLDLKVAKDRLKRYQMKMHSETMRLTEKAKELVTAGRKDRALLVLKMRRLREDEQAKAAGQLLNVEQLITQIEWEREQLQVFDALKSGNQALEAIHKIVSLEEVDKLMADTADSIAYEQEISRLLSNNLSAGAEEEVLREFDELQA 175          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: A0A5D6XUA9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUA9_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.560e-35
Identity = 75/155 (48.39%), Postives = 111/155 (71.61%), Query Frame = 0
Query:   14 AHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELDA 168
            A VT +D+A+LDLKN+RDRL +YQ +LD+E  +L   A  ++  +++DRA L LKVKK K+ Q  +A   L TV ++++T++WE+QQL+VF  LK GN+ LNA+H+EM ++ VE LM +T E+     EIS+ IGGS T  +E+ +L ELAE++A
Sbjct:   30 AQVTSKDKAILDLKNARDRLRKYQARLDVEAQQLHESAKKLLLAEKRDRAKLALKVKKFKEQQMKQADEHLLTVLEMLDTVEWETQQLKVFEGLKAGNSLLNAIHQEMSVEAVENLMLETEEAQETANEISRLIGGSLTLEDEDAVLLELAEIEA 184          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: A0A7S2BZN2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BZN2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 1.870e-35
Identity = 78/174 (44.83%), Postives = 121/174 (69.54%), Query Frame = 0
Query:    1 MGNLMSRKKKRE-----RAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELDAE 169
            MG+LMS  K  +     +A +T QD+A+LDLK SRDRL +YQK ++ +  KL  QA+ + K  +KDRA+L +K+K+ K+ Q  +  +QL TV+++++TI WE++ ++V  AL+EGN AL+A+H  M +DKVE LM +TAE+IA++QEI   + G     +E +L AELA ++A+
Sbjct:   14 MGSLMSTSKSEKAKPNMKAQLTQQDKAILDLKASRDRLKKYQKAMETDSAKLLKQAIALNKAGKKDRAVLCMKMKRYKEKQVGQVDAQLLTVEEMVQTIQWETETMKVVEALQEGNKALDAIHSVMSVDKVEALMDETAEAIAVQQEIDGLLSGEDIAVDEGELEAELAAMEAD 187          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: A0A3M6VKN6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKN6_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.000e-35
Identity = 75/155 (48.39%), Postives = 111/155 (71.61%), Query Frame = 0
Query:   13 RAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELD 167
            RA +T +D+A LDLKN+RDRL +YQ +LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L  V  +++T++WE+QQLQVF  LK GN+ LNA+H+EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE++
Sbjct:   29 RAQITSKDKATLDLKNARDRLKKYQTRLDIEANQLYESAKKLLQAGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTMEWETQQLQVFEGLKAGNSILNAIHKEMTVEAVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 183          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: W2QKK3_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QKK3_PHYPN)

HSP 1 Score: 135 bits (341), Expect = 6.430e-35
Identity = 74/155 (47.74%), Postives = 111/155 (71.61%), Query Frame = 0
Query:   13 RAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELD 167
            RA +T +D+A+LDLKN+RDR  +YQ +LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L  V  +++T++WE+QQLQVF  LK GN+ LNA+H+EM ++ VEELM +T E+ A   EIS+ IGGS T  +E+ +L+ELAE++
Sbjct:   28 RAQITSKDKAILDLKNARDRRKKYQARLDIEANQLHDSAKRLLQVGKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKAGNSILNAIHKEMTVESVEELMLETEEAQATANEISRIIGGSLTVEDEDAVLSELAEIE 182          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: A0A0P1AN92_PLAHL (Hydroxymethylglutaryl-mitochondrial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AN92_PLAHL)

HSP 1 Score: 133 bits (335), Expect = 4.330e-34
Identity = 73/155 (47.10%), Postives = 110/155 (70.97%), Query Frame = 0
Query:   13 RAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELD 167
            RA +T +D+AVLDLKN+RDRL +YQ +LD+E  +L   A  +++  ++DRA L LK+KK K+ Q  +A   L  V  +++T++WE+QQLQVF  LK  N  LNA+H+EM ++ VEELM +TAE+ A   EI + IGG+ +  +E+ +L+ELAE++
Sbjct:   27 RAQITSKDKAVLDLKNARDRLRKYQARLDIEANQLHDSAKRLLQADKRDRAKLALKLKKYKEQQMHQADEHLIQVLGMLDTVEWETQQLQVFEGLKASNLILNAIHKEMTVEAVEELMLETAEAQATANEIGRIIGGNLSVEDEDAVLSELAEIE 181          
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Match: A0A067CN09_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CN09_SAPPC)

HSP 1 Score: 133 bits (334), Expect = 4.670e-34
Identity = 70/153 (45.75%), Postives = 115/153 (75.16%), Query Frame = 0
Query:   16 VTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQLQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGSWTDANEEDLLAELAELDA 168
            V+ +D+A+L+LK SRDRL +YQK L++E   L+++A  ++ +K+KDRA+L LK++K K  Q ++A + L  V Q++ +++WESQQLQ+F  LK GN+ L+A+H+EM ++ VE+LM +T E+ A   EIS+ +GG+ +  +E+ +LAELAE++A
Sbjct:   31 VSSKDKAMLELKASRDRLKKYQKALEVESATLESKARQLLAKKQKDRAMLCLKMRKFKLQQIEQADTHLLNVHQMIGSVEWESQQLQIFEGLKAGNSVLDAIHKEMTIEAVEDLMLETQEAQAHADEISRILGGALSTQDEDAVLAELAEIEA 183          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.111.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYA5_ECTSI1.690e-9289.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK96_9STRA2.830e-4755.49Snf7-domain-containing protein (Fragment) n=1 Tax=... [more]
H3H1K0_PHYRM5.470e-3648.39Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A4D9D5S7_9STRA1.070e-3547.43Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A5D6XUA9_9STRA1.560e-3548.39Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A7S2BZN2_9STRA1.870e-3544.83Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A3M6VKN6_9STRA3.000e-3548.39Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
W2QKK3_PHYPN6.430e-3547.74Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]
A0A0P1AN92_PLAHL4.330e-3447.10Hydroxymethylglutaryl-mitochondrial n=1 Tax=Plasmo... [more]
A0A067CN09_SAPPC4.670e-3445.75Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 55..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..303
NoneNo IPR availablePANTHERPTHR22761:SF5CHARGED MULTIVESICULAR BODY PROTEIN 6coord: 3..290
IPR005024Snf7 familyPFAMPF03357Snf7coord: 22..176
e-value: 1.3E-32
score: 112.8
IPR005024Snf7 familyPANTHERPTHR22761CHARGED MULTIVESICULAR BODY PROTEINcoord: 3..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig68contigP-littoralis_Contig68:628816..639464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig68.111.2mRNA_P-littoralis_Contig68.111.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig68 628768..641218 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig68.111.2 ID=prot_P-littoralis_Contig68.111.2|Name=mRNA_P-littoralis_Contig68.111.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=304bp
MGNLMSRKKKRERAHVTDQDRAVLDLKNSRDRLTRYQKKLDLECGKLQAQ
ALVMVKEKRKDRAILLLKVKKLKQDQADKASSQLFTVQQLMETIDWESQQ
LQVFNALKEGNAALNALHEEMPLDKVEELMADTAESIAMEQEISKAIGGS
WTDANEEDLLAELAELDAETAAAAVPAPAPAPVPIPAPAVVEAASKPSEV
VVHGQEDAPETTAAAAAPAPAPAPAPAPAPAPAPAPAPAEPAEPAVATEP
ATGTAAAVESTTTPLEELLPEAPTDTPVVVPAAAAAAEEEEEEEKERPVL
VPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam