prot_P-littoralis_Contig68.100.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig68.100.2
Unique Nameprot_P-littoralis_Contig68.100.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length370
Homology
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BLAST of mRNA_P-littoralis_Contig68.100.2 vs. uniprot
Match: D7FY80_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY80_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 1.250e-80
Identity = 178/320 (55.62%), Postives = 192/320 (60.00%), Query Frame = 0 
Query:   32 GFLKAARGKTAATTTGPTPSKPRCRKVATRCRIAGCSGRPWFALPGSRVPKACKDHKEEGEVNIYTRVCEVDGXXXXXHYGMEGARARFCCTXXXXXXXXXXXXXXXXXXXXXXPSWAISKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSAAVPATTPFSVPSTPPVAESTAADSQALEKGAVMGEGDASPLSASGSXXXXXXXXXXXTAEAPGPARYCAAHAPTGAVNVAASRCRHPGGCSVQPYFGREGGGQQAEFCARHRKRGMTDVRNPRCGAMGCTAQPCCGKKGDPRPLLCLRHAEPGMINFRSEGYR 351
            G +  A  KTA       PSKPRCRKV  RCR  GC+GRPWFA PGSRVP+ACK HKEEGEVN+Y   CE D      HYG +G RARF                         PSWA  + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKS AV  T                  SQ  E       G A+  +A+                 PGPARYCAAHAP GA NV ASRCRHPGGCSVQPYFGREGGGQQ +FCA HRK GMTDVRNPRC A+GCTAQP CG++GDPR           M+NFRS GYR
Sbjct:    2 GRMAVANAKTA-------PSKPRCRKVGARCRFEGCTGRPWFAQPGSRVPRACKAHKEEGEVNVYAPACEADACTTRPHYGADGGRARFXXKHKLDGMVDVLNKRCAKKGCRRQPSWARERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSGAVATT-----------------KSQPSEDNTETTAGGAAATAAAH----------------PGPARYCAAHAPAGATNVTASRCRHPGGCSVQPYFGREGGGQQPKFCALHRKPGMTDVRNPRCTAVGCTAQPRCGREGDPRXXXXXXXXXXXMVNFRSAGYR 281
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.100.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FY80_ECTSI1.250e-8055.63EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY80... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D6.10.140.110coord: 81..142
e-value: 3.1E-7
score: 32.5
coord: 289..355
e-value: 5.2E-7
score: 31.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..208
IPR043822EsV-1-7 cysteine-rich motifPFAMPF19114EsV_1_7_cyscoord: 137..170
e-value: 6.1E-6
score: 26.7
coord: 100..132
e-value: 5.3E-6
score: 26.9
coord: 272..308
e-value: 2.5E-6
score: 27.9
coord: 62..96
e-value: 0.0063
score: 17.1
coord: 312..345
e-value: 0.0012
score: 19.4
coord: 175..267
e-value: 0.01
score: 16.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig68contigP-littoralis_Contig68:528435..531476 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig68.100.2mRNA_P-littoralis_Contig68.100.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig68 528148..532514 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig68.100.2 ID=prot_P-littoralis_Contig68.100.2|Name=mRNA_P-littoralis_Contig68.100.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=370bp
MAEAPLQQMQQQQQRQQLQLWPAPLPFPVKSGFLKAARGKTAATTTGPTP
SKPRCRKVATRCRIAGCSGRPWFALPGSRVPKACKDHKEEGEVNIYTRVC
EVDGCGTRPHYGMEGARARFCCTHKLDGMVDVLNKRCATEGCRKQPSWAI
SKGTRALFCKEHKEGGMVDTKHRTCLHPGCTRFPSKSAAVPATTPFSVPS
TPPVAESTAADSQALEKGAVMGEGDASPLSASGSGSPAAAPATTPTAEAP
GPARYCAAHAPTGAVNVAASRCRHPGGCSVQPYFGREGGGQQAEFCARHR
KRGMTDVRNPRCGAMGCTAQPCCGKKGDPRPLLCLRHAEPGMINFRSEGY
RGSARQKRSKVLESPACKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043822EsV_1_7_cys