mRNA_P-littoralis_Contig68.88.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig68.88.2 vs. uniprot
Match: A0A6H5KYY0_9PHAE (Response regulatory domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY0_9PHAE) HSP 1 Score: 824 bits (2128), Expect = 5.560e-273 Identity = 581/1188 (48.91%), Postives = 693/1188 (58.33%), Query Frame = 1
Query: 565 LWRSISSEADIAISGGXXXXXXXXXXDATPAWVWVDVGIAWAIAPVAGASLQLSLWGSIVPSWLCVTFALAHGLRAEEVALDGDDVDNAMTLFAALAICALAALAIGYQVLWEQARDSITLMSLEDSIALKDHIRRQTAFSEMLLRHLVTEPSLQVLEAGVKELFKDSRIFVMHSDALEQIKDGVNLLSDYGEKALDRLKNGTPELPTPVLENTDMEDILDACLRTTAYLAVSRDHHKVQLDLRVAAEVEKHVKTCRLWLSQMTRACLIHALHPDENESVILRISYVKPGLMRVGVEAAWRVAGSKEGGRGE-RDGAAAPEQEGPRMLSGWDRDMPAAAWWVRAAALSLGGEADYDRSRDREGFHELWFTIPASNIPEHEVANLEAAAAAXXXDXXXXXXXXXXXGVGKAXXXXXXXXXXXXXAL-----------LLNDDCGKNLTAKLLLLGSVQAGARGRLSAAAAAGAGRAERXXXXXXXXXXXALSALAPSXXXXXXXXXXDALPRPGRW--------PASAASISSPSSPFDSRASKKGGALLPTIQHAEVGTRSAATT------SGERQQGSGXXXXXXXGRSSVN-LGGTALATLNRGNQTSFGGTAIDSNRGKKRAKQFSRTSARPDANDPVLEDIIVSRV----DFHDNESGGIVQGXXXXXXXXXXXXXXXATDNK---------------RSFRSAPSSPERSSFAVDKGSGRSIALGPTVRKLLVAEDGLKNLCASLQNDDADGDNPEGAAASARAAVRR-AMGRSDQLVTTARPESVARSVDQVAAGLEVSEPRGN---NRPRSAP-PRSSIAKKASVFGSLVHSLVETNSMAWLGTGRQPSAAEYLSEREESDSXXXEEHEPKKEVLVVDPQGLVRWVIPRLEEKRFAVTVAHSAEEAMNMMQETVFHVAVVDLHMPKIAGTDFCRNVRKHESETVDDAHPATVE--SGEEG---NEDQPSIKLLLHTTSAGCIESAELEAFLREDLADEYVPHPLDPTTLFDFLKLLEEEEDDDRHGTRTMS---------------TGFMEKYSLCPRGGSWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGV--VARWFRSSRA--LPRPTVDDVASTFFTLKTCMGNAHAPACAAAASGGRDGGEGA--VKFAGPWRPGAAAISPGLGPASEGSGGG 3897
+WR +SSEA+ A + G TPAW WVDVGIAWAIAP AG SLQLSLWGSIVPSWLCVT ALA+GLRAEEVALDGD D A+ LFA+L +C L+ALA+GYQVLWEQARD+ TLM+LEDSI +DH RRQ AFSE+LLRHLVTEPSL VLEAGVKELFKD+RIFV+HSDALEQI+DGV+LL++YGEKAL LKNG ELPTPVLE DME+ILDACLRTTAYLAVSRDHHKVQLDLRVAA V+K VK RLWLSQMTRACLIHALHPDE++SVILR+SY +PGLMRVG+EA WRVAGS+ G G DG +A +E PR+LSGWDRDMPAA WWVRAAAL+LGGEADYDRSRDREGFHELWFTIPA N+P+ + LE A A XXXXXXXXX XXXXXXXXXXXXX L D G+ + RG L A A R L ++ + ALPRPG P+ S S+PSS A+KK G +LP IQ ++ + TT S +R +GS R SV GGT T+ G ++S GGT + S + + R SARP+ LEDI +SRV DF+ +E A + R RS P+SP+ + ++ S R +L T+R LL E GL L SLQ D+A+ AA + RAA+R+ A G V+ + E+VAR+ Q AG+ + RP SAP P +++ KKASVFG LV +LVE+NSM WLGTG+ A SE + D+ EE EE A+ VAHSAEEAM+M+ E + VAVVDLHMP+++GT+FCR VR HE E + +G+EG NE QPS KLLLHTTSAG ++ +LEAFL EDL DEYVPHPLD TL DFLKL EEE DD++GTR MS T + KY G S SG V VAR F + RA +++DV STFF++K AHA A AA G D GA + AGPWRPG A+SPGLG A + G G
Sbjct: 1 MWRGMSSEAESAGTSGSGVEGGDAA--GTPAWAWVDVGIAWAIAPAAGGSLQLSLWGSIVPSWLCVTVALAYGLRAEEVALDGDGADGALILFASLVVCGLSALAVGYQVLWEQARDARTLMALEDSIDFEDHRRRQAAFSELLLRHLVTEPSLHVLEAGVKELFKDARIFVLHSDALEQIQDGVSLLAEYGEKALSGLKNGASELPTPVLEKADMEEILDACLRTTAYLAVSRDHHKVQLDLRVAANVDKSVKIYRLWLSQMTRACLIHALHPDEDDSVILRVSYARPGLMRVGIEAVWRVAGSRTGSGGSWGDGTSADHREAPRVLSGWDRDMPAAVWWVRAAALALGGEADYDRSRDREGFHELWFTIPAENVPDDDDLELETPAGARDTATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLSEIDKRGEXXXXXXXXGADEE--RGGLDMTAPRAARRESSRKPT--------LEPISSAPKTGAAGAGAAALPRPGAMAVSPSFVNPSPRLSSSAPSSLHGLPAAKKRGTILPAIQDTQISLEGSQTTTVVEFDSDDRARGS---------RKSVGGAGGTDRTTIGHGYRSSLGGTIVGS------SGRGERASARPNVTH--LEDIRMSRVVADCDFNPDEHANRRSSSAPDPTAAAAAWSGEANSGETTAAASVATTSTPVDRISRSTPNSPKGLAAGGERTSKRR-SLSVTIRNLLGTEGGLDKLRESLQEDEANSGKAAAAAEAVRAAMRKTATGGDKGTVSMHKHEAVARAAGQGTAGMAAARLTSGLFLKRPSSAPSPAAAVTKKASVFGGLVQTLVESNSMNWLGTGK---VASNNSEEKGGDAGDSEED---------------------TEESGQALEVAHSAEEAMDMILEGYYQVAVVDLHMPRMSGTEFCRRVRAHELEVAAAVRSVNINGRAGQEGEGLNEPQPSTKLLLHTTSAGSVKFDDLEAFLEEDLVDEYVPHPLDLGTLSDFLKLFEEE--DDQYGTRKMSALLEGGADKSNGGDSTSTVSKYC----GDSAGQAVSGLVRSLSGKNLAGADLGPQGGPVESGPVTFVARLFGAGRAPXXXXXSMEDVGSTFFSVKGRSREAHAAATAAKKPHGVDSERGASSTRTAGPWRPGIPAVSPGLGAAGDEGGDG 1128
BLAST of mRNA_P-littoralis_Contig68.88.2 vs. uniprot
Match: D7FY83_ECTSI (Response regulatory domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY83_ECTSI) HSP 1 Score: 696 bits (1795), Expect = 4.900e-228 Identity = 465/921 (50.49%), Postives = 558/921 (60.59%), Query Frame = 1
Query: 928 MSLEDSIALKDHIRRQTAFSEMLLRHLVTEPSLQVLEAGVKELFKDSRIFVMHSDALEQIKDGVNLLSDYGEKALDRLKNGTPELPTPVLENTDMEDILDACLRTTAYLAVSRDHHKVQLDLRVAAEVEKHVKTCRLWLSQMTRACLIHALHPDENESVILRISYVKPGLMRVGVEAAWRVAGSKEGGRGERDG-AAAPEQEGPRMLSGWDRDMPAAAWWVRAAALSLGGEADYDRSRDREGFHELWFTIPASNIPEHEVANLEAAAAAXXXDXXXXXXXXXXXGVGKAXXXXXXXXXXXXXALLLNDDCGKNLTAKLLLLGSVQAGARGRLSAAAAAG----------AGRAERXXXXXXXXXXXALSALAPSXXXXXXXXXXDALPRPGRWPASAA--------SISSPSSPFDSRASKKGGALLPTIQHAEVGTRSAATT------SGERQQGSGXXXXXXXGRSSVN-LGGTALATLNRGNQTSFGGTAIDSN-RGKKRAKQFSRTSARPDANDPVLEDIIVSRV--------DFHDNESGGIVQGXXXXXXXXXXXXXXXATDNKRSF-----------RSAPSSPERSSFAVDKGSGRSIALGPTVRKLLVAEDGLKNLCASLQNDDADGDNPEGAAASARAAVRRAMGRSDQ-LVTTARPESVARSVDQVAAGLEVSEPRGN---NRPRSAP-PRSSIAKKASVFGSLVHSLVETNSMAWLGTGRQPSAAEYLSEREESDSXXXEEH----EPKKEVLVVDPQGLVRWVIPRLEEKRFAVTVAHSAEEAMNMMQETVFHVAVVDLHMPKIAGTDFCRNVRKHESETVDDAHPATV-----ESGEEGNEDQPSIKLLLHTTSAGCIESAELEAFLREDLADEYVPHPLDPTTLFDFLKLLEEEEDDDRHGTRTMS 3510
M+LEDS+ +DH RRQ+AFSE+LLRHLVTEPSL VLEAGVKELFKD+RIFVMHSDALEQI+DGV+LL++YGEKAL LKNG ELPTPVLE DME+ILDACLRTTAYLAVSRDHHKVQLDLRVAA+V+K VKT RLWLSQMTRACLIHALHPDE++SVILR+SY +PGLMRVG+EA WRVAGS+EGG +A ++E PR+LSGWDRDMPAAAWWVRAAAL+LGGEADYDRSRDREGFHELWFTIPA N+P+ + L+ +A XXXXXXXX G G ++L + + LG + G +S+ AA A RA R L L+ + ALPRPG AS S S+PSS A+KK G +LP IQ E+ + TT S +R + S R SV GGT T+ G ++S GGT + S+ RGK SARP N P LEDI VSRV D H N T S RS+P+SP+R + ++ S R +L TVR LL E GL L SLQ D+A+ AA R A+R+ D+ V+ + E+VAR+ Q AAG+ + RP SAP P +++ KKASVFG LV +LVE+NSM WLGTG+ A +SE E D+ EE E E+L+VDPQGLVRW +PRL+E+ F VTVAHSAEEAM+M+ E + VAVVDLHMP+++GT+FCR VR HE E + GEE NE PS KLLLHTTSAG + +LEAFL EDL DEYVPHPLD TLFDFLKL EEE DD++GTR MS
Sbjct: 1 MALEDSMDFEDHRRRQSAFSELLLRHLVTEPSLHVLEAGVKELFKDARIFVMHSDALEQIQDGVSLLAEYGEKALSGLKNGASELPTPVLEKADMEEILDACLRTTAYLAVSRDHHKVQLDLRVAADVDKSVKTYRLWLSQMTRACLIHALHPDEDDSVILRVSYARPGLMRVGIEAVWRVAGSREGGXXXXXXXTSADQREAPRVLSGWDRDMPAAAWWVRAAALALGGEADYDRSRDREGFHELWFTIPAENVPDDDDLELDTPVSARDTATXXXXXXXXTGGEGPPAELPDAGAS----SVLSTRGGSTSGRTRSSRLGEIDKQGEGSVSSTAAGADEERGGLDMTAPRAARRESSRNPT----LEPLSSAHKTGATGAGAAALPRPGAMAASPTFVNPSPRLSSSAPSSLHGLPAAKKRGTILPAIQDTEISLEGSQTTNVMEFDSDDRARSS---------RKSVGGAGGTDRNTIGHGYRSSLGGTIVGSSGRGKS-------VSARP--NVPRLEDIRVSRVATDCGFNPDEHANRRPSSAPDPTAAAAAWSGETNIGETTAAASVATTSTPVDRISRSSPNSPKRFAAGGERTSKRR-SLSITVRNLLGTEGGLDKLRESLQEDEANPGKAAAAAEEVRGAMRKTAAAGDKGNVSMHKHEAVARAAGQGAAGMAAARLTSGLFLKRPSSAPSPAAAVTKKASVFGGLVQTLVESNSMNWLGTGK---VASNISEEREGDTGDSEEDTEESEQTLEILLVDPQGLVRWALPRLKERNFFVTVAHSAEEAMDMILEGYYQVAVVDLHMPRMSGTEFCRRVRAHELEVATSIRSMNTSGRAGQEGEELNEPGPSTKLLLHTTSAGSVTFDDLEAFLEEDLVDEYVPHPLDLGTLFDFLKLFEEE--DDQYGTRKMS 889 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.88.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig68.88.2 >prot_P-littoralis_Contig68.88.2 ID=prot_P-littoralis_Contig68.88.2|Name=mRNA_P-littoralis_Contig68.88.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1246bp MQQQRHSADGSSQTESNDIVDDRILSQGTQQRISRLRATLVEPIARGKQDback to top mRNA from alignment at P-littoralis_Contig68:492368..513612+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig68.88.2 ID=mRNA_P-littoralis_Contig68.88.2|Name=mRNA_P-littoralis_Contig68.88.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=21245bp|location=Sequence derived from alignment at P-littoralis_Contig68:492368..513612+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig68:492368..513612+ >mRNA_P-littoralis_Contig68.88.2 ID=mRNA_P-littoralis_Contig68.88.2|Name=mRNA_P-littoralis_Contig68.88.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3738bp|location=Sequence derived from alignment at P-littoralis_Contig68:492368..513612+ (Pylaiella littoralis U1_48)back to top |