mRNA_P-littoralis_Contig68.71.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: UPI0007F012D1 (uncharacterized protein LOC108203813 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F012D1) HSP 1 Score: 214 bits (545), Expect = 2.230e-64 Identity = 124/273 (45.42%), Postives = 165/273 (60.44%), Query Frame = 1
Query: 1 TRKFDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTVE-VTKARYKKMML--VIPDMKLRF---LRPPAAATGQRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKCKEEAWEKGVAALAE 801
T F M NVVH+DEK FY+C +Y DEP P R+V+ K IT+ MFL V +PR FSGKI I+P T E A+RNS+NR AGT+VTK E +TK + K ++ VIP + ++ +R PH+ ++ E A + DG+DIRLI P NSPD N+LDL FF SIQ LQ P ++++LV AVK+++ + P LNRV+L+ Q C+++IM GDNDYK PHM K RLE GTLP Q +C+ + VA L E
Sbjct: 93 TLLFSDMFNVVHIDEKWFYMCKTTTKYYLVHDEPEPTRRVKSKRFITKAMFLAAVARPRNG------FSGKIGIFPFTFIEPAKRNSKNRVAGTMVTKVDESITKEKVKSCLIEKVIPAIHAKWPQGMRTIIIQQDNAKPHIDCNNAEFMQAASKDGFDIRLICQPPNSPDLNVLDLGFFRSIQDLQHEKAPTTIEELVAAVKQSFDEYPVEKLNRVFLTQQTCMKEIMKFKGDNDYKIPHMGKDRLEREGTLPLQIRCESDLVNDVVAYLEE 359
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: A0A834FW95_RHOSS (Uncharacterized protein n=3 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834FW95_RHOSS) HSP 1 Score: 205 bits (521), Expect = 7.100e-60 Identity = 116/270 (42.96%), Postives = 163/270 (60.37%), Query Frame = 1
Query: 10 FDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTVE-VTKARYKKMML--VIPDMKLRFLRPPAAAT-----GQRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKCKEEAWEKGVAAL 795
F M N VH+DEK FY+ + +Y DE P R + K IT+VMFL V +PR + EFSGKI I+P TV+E A+R S+NR AGT+ TK V VTK + ++ VIP ++ ++ + T PH+ +D E A +G+DIRL N PANSPD N+LDL FFN+IQSLQ + PR++D LV AV++++ K P L+ V+LSLQAC+ ++M G N+YK PH++K +L G LP+Q +C + E + L
Sbjct: 170 FKAMYNYVHIDEKWFYMTKESERYYVLPDEDQPHRTCKSKRFITKVMFLAAVARPRFGANGCEEFSGKIGIFPFTVKEPAKRTSKNRLAGTMETKAVAAVTKDVIRSYLIEKVIPAIQSKWHQSSVGETIYIQQDNARPHIKPNDVEFHEAATRNGFDIRLTNQPANSPDLNVLDLGFFNAIQSLQHQEAPRTIDQLVNAVEKSFDKLPSRELDSVFLSLQACMVEVMKVNGGNNYKLPHIKKPQLRRDGVLPFQLECGRDVMENVLIHL 439
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: A0A8I6WKB7_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6WKB7_HORVV) HSP 1 Score: 193 bits (490), Expect = 3.090e-57 Identity = 109/266 (40.98%), Postives = 157/266 (59.02%), Query Frame = 1
Query: 19 MGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTVEVTKARYKKMML--VIPDMKLRFLRPPAAAT-----GQRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKCKEEAWEKGVAAL 795
M N+VH+DEK FY+ + +Y D+E P R +Q I VMFL V +P+ ++ N FSGKI I+P + AQR S NR GT+ TK+++V + ++ M+ ++P ++ + A T PH++ +DPE A+ + G DIRLI PANSPD N LDL FFNS+QSL D +PR++ DL+K V E ++ LNRV+LSLQAC+ +I+ G N YK PH+ K RLE+ G LP + C +E + + L
Sbjct: 1 MHNIVHIDEKWFYMTKKNRNYYLLDEEEEPTRTIQSGASIGNVMFLTAVARPKWDSEGNVTFSGKIGIWPFVKEIPAQRKSDNRPRGTMETKSIKVNRQVMREFMIENLLPAIQSSWPDNDAGQTIFIKQDNAKPHILPNDPEFLVAVESTGLDIRLIQQPANSPDLNGLDLGFFNSLQSLTDCLSPRTLQDLIKGVLEEFENYEVYKLNRVFLSLQACMIEILNHAGGNGYKIPHVNKERLESLGLLPQRLTCPQEVYANALHNL 266
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: UPI0014933F33 (uncharacterized protein LOC117838342 n=2 Tax=Setaria viridis TaxID=4556 RepID=UPI0014933F33) HSP 1 Score: 193 bits (490), Expect = 4.270e-57 Identity = 108/269 (40.15%), Postives = 154/269 (57.25%), Query Frame = 1
Query: 10 FDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTVEVTKARYKKMML--VIPDMKLRFLRPPA-----AATGQRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKCKEEAWEKGVAAL 795
F M N++H DEK F + Y DE P R V++KN+I +VMF + QPR + F GK+ +P +E AQR S NR GT +TKT++V + K M+ ++ +++R+ + A P H+ DDP+ + A+A G DIR++N PANSPD N LDL FF S+QS+ DRTT R++DD++ V ++ P +LNRV+L+LQ C+ ++M G N YK PHM K RLE AG LP C E +K + L
Sbjct: 13 FRHMKNIIHTDEKWFDGTRKNKKMYMAPDEEDPHRTVKNKNNIDKVMFYSGITQPRFDAEGRCYFDGKLGCWPFVREEPAQRRSDNRPRGTPITKTMKVDRQTMKSYMITKLLEAIRIRWPQEDANEIIWIQQDNSPSHIHADDPDFKTAVAHTGLDIRIMNQPANSPDMNCLDLGFFASLQSMTDRTTSRNMDDIIANVINEYEHYNPVILNRVFLTLQGCMIEVMKDNGGNRYKIPHMNKPRLEAAGMLPKYLSCDREIVQKAIELL 281
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: UPI000B906F28 (uncharacterized protein LOC110892967 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B906F28) HSP 1 Score: 191 bits (486), Expect = 1.610e-56 Identity = 115/276 (41.67%), Postives = 164/276 (59.42%), Query Frame = 1
Query: 1 TRKFDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTV-EVTKARYKKMML--VIPDMKLRFLRPPAAATG-------QRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKCKEEAWEKGVAALA 798
T F M NVVH+DEK FY+ + +Y E P+R + K IT+VMFL V +PR +TS N FSGKI I+P T E A+R+S+NR AGT+ TK + V K + ++ V+P ++ ++ P TG PH DD + + DG+DIRL P NSPD N+LDL FF++IQSLQ++ S+D+LV AV+ +++K LN V+L+LQAC+++IM G N Y++PH+ KG+LE G LP Q +C + V+ LA
Sbjct: 8 TPSFYDMFNVVHIDEKWFYLSKPSKRYYLLPGEDEPLRTCKSKKFITKVMFLAAVARPRFDTSGNERFSGKIGIFPFTKLEPAKRSSKNRVAGTLETKPILSVIKEVTRSWLIDKVLPAIRDKW---PQGHTGPIFIQQDNAKPHNNIDDEQFIQEASRDGFDIRLRFQPPNSPDLNVLDLGFFHAIQSLQEQEVLGSIDELVHAVQTSFEKLSSHELNNVFLTLQACMKEIMKVHGSNHYQTPHIGKGKLERQGKLPLQIECDSNLINEVVSHLA 280
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: Q49KC8_PEA (Transposase n=2 Tax=Pisum sativum TaxID=3888 RepID=Q49KC8_PEA) HSP 1 Score: 195 bits (495), Expect = 2.400e-56 Identity = 107/258 (41.47%), Postives = 152/258 (58.91%), Query Frame = 1
Query: 10 FDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTVEVTKARYKKMML---VIPDMKLRFLRPPAAAT-----GQRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKC 759
F M N++H+DEK FY+ + +Y DE P R + KN I +VMFL +PR ++ N FSGKI ++P E A R+S NR AGT+VTK + + L V+P ++ ++ R +T H+ +DDP R A DG+DIRL+ PANSPD NILDL FF++IQSLQ + P+++D+L+ AV ++++ P NR+++SLQ C+ +IM G N YK PH+ K RLE G LP Q KC
Sbjct: 140 FKSMHNIIHIDEKWFYMTKKSEKYYLLPDEDEPYRTCKSKNFIAKVMFLVAQTRPRFDSEENETFSGKIGVFPFVTHEPAIRSSINRVAGTMVTKAITTVNRDVVRSFLIDKVLPAIREKWPRDEFESTIFIQQDNARTHINHDDPLFREAATKDGFDIRLMCQPANSPDLNILDLGFFSAIQSLQYKEAPKTIDELISAVVKSFENFPSIKSNRIFVSLQLCMIEIMKEKGSNKYKIPHVNKERLERVGQLPIQIKC 397
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: A0A485KBU5_9STRA (Aste57867_2438 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KBU5_9STRA) HSP 1 Score: 196 bits (499), Expect = 3.120e-56 Identity = 112/271 (41.33%), Postives = 159/271 (58.67%), Query Frame = 1
Query: 10 FDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTVEVTKARYKKMML--VIPDMKLRFLRPPAAATG-------QRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKCKEEAWEKGVAAL 795
FD M + VH+DEK FY+ VK+ Y E P R Q K IT+VMFL V +PR N + + F GKI + T AQRNSRNR +GT+VT V V++ Y+ M++ VIP +K ++ P A T PH+ D + AA ADGWDI + P NSPD N+LDL FF +IQSLQ+RT R++D+L+ A AW + LN +L+LQ+C+ + + +GG+N+YK PHM+K + G LP +C + ++ G+A +
Sbjct: 157 FDDMMSYVHIDEKWFYMTRVKRTLYLLPGEEPPHRTTQSKRFITKVMFLSAVARPRWNYNKDEWFDGKIGTWHFTEVVPAQRNSRNRPSGTLVTVPVNVSRDTYRDMLVNNVIPAIKNKW---PDARTSCIVIQQDNARPHVTTTDKGVLAACKADGWDIAMECQPPNSPDLNVLDLGFFRAIQSLQERTRCRTIDELIAATLSAWVSVDASTLNANFLTLQSCMVETIRSGGNNNYKVPHMKKAPMMKQGRLPDAIECPRDVFDHGLALM 424
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: UPI000CD873B3 (uncharacterized protein LOC111883545 n=1 Tax=Lactuca sativa TaxID=4236 RepID=UPI000CD873B3) HSP 1 Score: 195 bits (495), Expect = 4.060e-56 Identity = 113/270 (41.85%), Postives = 161/270 (59.63%), Query Frame = 1
Query: 10 FDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTV-EVTKARYKKMML--VIPDMKLRFLR----PPAAATGQRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKCKEEAWEKGVAALA 798
F M NV+H+DEK FY+ + +Y E P+R Q K IT+VMFL V +PR + S N FSGKI IYP T E A+R+S+NR AGT+ TK + VTK + ++ V+PD++ ++ R P PH+ +D E A + DG+DIRL P+NSPD N+LDL FF +IQSLQ++ ++D+LV AV+ A++K LN V+L+LQ C+ +I+ G N+Y+ PH+ K RLE G LP + C E + + LA
Sbjct: 164 FHDMFNVIHIDEKWFYMSKPSRRYYLVPGEDEPLRTCQSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIYPFTRLEPAKRSSKNRVAGTLETKPILSVTKEVTRSWLIEKVLPDIRAKWPRSHVGPIFIQQDNAKPHIDVNDNEFLEAASQDGFDIRLNFQPSNSPDLNVLDLGFFRAIQSLQEQEALGTIDELVHAVQTAFEKMQSQQLNNVFLTLQTCMREIIKVQGGNNYQIPHIGKNRLEREGNLPLRIGCDENLINEALLHLA 433
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: UPI001CB9A663 (uncharacterized protein LOC122597563 n=3 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9A663) HSP 1 Score: 194 bits (493), Expect = 4.430e-56 Identity = 107/257 (41.63%), Postives = 159/257 (61.87%), Query Frame = 1
Query: 10 FDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTV-EVTKARYKKMML--VIPDMKLRFLR----PPAAATGQRPPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKC 759
F + NV+H+DEK FY+ + +Y +E P+R + K IT+VMFL V +PR + S N FSGKI I+P T E A+R+S+NR AGT++TK + VTK + ++ V+P ++ ++ R P PH+ +D E + DG+DIRL P NSPD N+LDL FF +IQSLQ++ S+D+LV AVK ++++ P LN V+L+LQ C+++IM G N+Y++PH+ KG+LE G LP +C
Sbjct: 136 FHDIFNVIHIDEKWFYMSKPSKRYYLVPNEIEPLRTCKSKKFITKVMFLAAVARPRFDASGNEVFSGKIGIFPFTTLEPAKRSSKNRVAGTLITKPILSVTKEVTRSWLIEKVLPAIRSKWPRDHTGPIFIQQDNAKPHIDVNDAEFNQEASKDGFDIRLCFQPPNSPDLNVLDLGFFRAIQSLQEQEVLGSIDELVSAVKTSFERMPSNELNNVFLTLQTCMKEIMKVRGGNNYQTPHIGKGKLERQGKLPLTIEC 392
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Match: UPI0006AB3C27 (uncharacterized protein LOC106393291 n=3 Tax=Brassica TaxID=3705 RepID=UPI0006AB3C27) HSP 1 Score: 194 bits (493), Expect = 6.060e-56 Identity = 113/272 (41.54%), Postives = 158/272 (58.09%), Query Frame = 1
Query: 7 KFDGMGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGQPRRNTSNNSEFSGKIRIYPSTVQERAQRNSRNRAAGTVVTKTVEVTKARYKKMMLVIPDMKLRFLRPPAAATGQR--------PPHLINDDPELRAAMAADGWDIRLINPPANSPDTNILDLSFFNSIQSLQDRTTPRSVDDLVKAVKEAWQKDPPAVLNRVWLSLQACLEQIMLAGGDNDYKSPHMRKGRLENAGTLPWQTKCKEEAWEKGVAALA 798
KF M NVVH+DEK FY+ Q +Y E P+R Q KN I++VMFL V+ +PR + N FSGKI I+P ++AQR S NR AGT+ K + K K L+ + + R PA G+ H+ +D E + A G DI+L+ P NSPD NILDL +F +IQ+LQ P++V+DLV AV+EA+ + PP ++NRV+L+LQ+C+ +IM GG N+YK PH++K LE G LP Q C E+ + +A
Sbjct: 150 KFVDMYNVVHIDEKWFYMTKKTQTYYLLPSEEDPLRTCQSKNYISKVMFLAVMARPRYDREVNETFSGKIGIFPFVTLQKAQRRSCNREAGTMELKPMVSIKRVDIKRFLIEKVLPRIYERWPAEDFGKTIFIQQDNAKTHVTVNDEEFQVAALQHGLDIQLMCQPPNSPDLNILDLGYFRAIQALQHHVCPKTVEDLVTAVEEAYDEYPPNLVNRVFLTLQSCMIEIMKIGGGNNYKIPHLKKDTLEREGLLPVQMDCDPNLVEEAMNYVA 421 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.71.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig68.71.1 >prot_P-littoralis_Contig68.71.1 ID=prot_P-littoralis_Contig68.71.1|Name=mRNA_P-littoralis_Contig68.71.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=261bp MGNVVHVDEKRFYVCDVKQWFYARDDEPAPIRQVQHKNDITRVMFLRVVGback to top mRNA from alignment at P-littoralis_Contig68:407466..408297- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig68.71.1 ID=mRNA_P-littoralis_Contig68.71.1|Name=mRNA_P-littoralis_Contig68.71.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=832bp|location=Sequence derived from alignment at P-littoralis_Contig68:407466..408297- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig68:407466..408297- >mRNA_P-littoralis_Contig68.71.1 ID=mRNA_P-littoralis_Contig68.71.1|Name=mRNA_P-littoralis_Contig68.71.1|organism=Pylaiella littoralis U1_48|type=CDS|length=783bp|location=Sequence derived from alignment at P-littoralis_Contig68:407466..408297- (Pylaiella littoralis U1_48)back to top |