mRNA_P-littoralis_Contig68.62.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A6H5KB73_9PHAE (DOT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB73_9PHAE) HSP 1 Score: 499 bits (1286), Expect = 8.070e-166 Identity = 237/263 (90.11%), Postives = 254/263 (96.58%), Query Frame = 2
Query: 854 AAGEFLCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKSGKHCVEFRRSGEKRWVNMLKTAFYIVERAQPSGGEVKEMEPDPTEGLAPVERWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMELQPGAYAIKQYVPGQLMSIETLPQ 1642
AAG FLCYECGL F SV+ELQLHMVRKTAWSNQGL+G RVSCLVDNREWHEGLVTQYHKSGKHCVE+RRSGEKRWVNMLK+AFYIVERAQP+GGEVKEME DPTEGLAP+E+WHY+E+ISPEFCMALSLLHRAYGCRVQETGH+TVGHTCVTDRDK+AAREVKGSLLYGELLPRGVNKAMGP+HLNA KA TIYDLGMGTGKVAMQVFLQFPNLTRVYG+ELSQARFELGEAALFALMELQPGAYAIK+++PGQ +SIETL Q
Sbjct: 138 AAGGFLCYECGLAFHSVKELQLHMVRKTAWSNQGLVGSRVSCLVDNREWHEGLVTQYHKSGKHCVEYRRSGEKRWVNMLKSAFYIVERAQPTGGEVKEMESDPTEGLAPIEKWHYEEDISPEFCMALSLLHRAYGCRVQETGHRTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEAALFALMELQPGAYAIKKHIPGQFISIETLDQ 400
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: D7FY73_ECTSI (Topoisomerase 6 subunit B n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY73_ECTSI) HSP 1 Score: 498 bits (1283), Expect = 3.660e-165 Identity = 238/263 (90.49%), Postives = 251/263 (95.44%), Query Frame = 2
Query: 854 AAGEFLCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKSGKHCVEFRRSGEKRWVNMLKTAFYIVERAQPSGGEVKEMEPDPTEGLAPVERWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMELQPGAYAIKQYVPGQLMSIETLPQ 1642
AA FLCYECGL F SV+ELQLHMVRKTAWSNQGLIG RVSCLVDNREWHEGLVTQYHKSGKHCVE+RRSGEKRWVNMLKTAFYIVERAQP+GGEVKEMEPDPTEGLAP+E+WHY E+ISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDK+AAREVKGSLLYGELLPRGVNKAMGP+HLNA KA TIYDLGMGTGKVAMQVFLQFPNLTRVYG+ELSQARFELGE ALFALMELQPGAY IK+++PGQ +SIETL Q
Sbjct: 141 AACGFLCYECGLAFHSVKELQLHMVRKTAWSNQGLIGSRVSCLVDNREWHEGLVTQYHKSGKHCVEYRRSGEKRWVNMLKTAFYIVERAQPTGGEVKEMEPDPTEGLAPIEKWHYHEDISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKVAAREVKGSLLYGELLPRGVNKAMGPRHLNAAKASTIYDLGMGTGKVAMQVFLQFPNLTRVYGIELSQARFELGEEALFALMELQPGAYTIKEHIPGQFISIETLAQ 403
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A7S4DH00_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DH00_HETAK) HSP 1 Score: 309 bits (792), Expect = 4.250e-96 Identity = 154/253 (60.87%), Postives = 183/253 (72.33%), Query Frame = 2
Query: 869 LCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKSGKHCVEFRRSGEKRWVNMLKTAFYIVERAQPSG----GEVKEMEPDPTEGLAPVERWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMELQPGAYAIKQYVPGQ 1615
+C+ECG +F ++ELQLH+ RKTAWSNQGL+GCRVSC VDNREW EG V YHKSGKHCVEF + E+R MLK AFYI+ER GEVKE E E +AP+E WHY E+I+ E+ A S+L + Y R QETGHKT GH CVT+ D+ A++ KGSLLYGELLPRGVNKA+G LNA A +YDLGMG GKVAMQ FLQFP+L RVYGVELS+AR+EL AL L+ L P AY I + PG+
Sbjct: 64 VCHECGNQFQDLRELQLHLKRKTAWSNQGLVGCRVSCFVDNREWQEGHVIAYHKSGKHCVEFTSNKERRLFKMLKIAFYIIERGSQQSSSGEGEVKEAEDIDMENMAPLEDWHYCEDITIEYAHAQSVLQKVYEGRAQETGHKTAGHLCVTEEDRALAKQSKGSLLYGELLPRGVNKALGRGCLNAADARVVYDLGMGLGKVAMQAFLQFPHLARVYGVELSKARYELAALALRRLVALFPEAYCIAEEEPGR 316
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A7S3HRH5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HRH5_9STRA) HSP 1 Score: 284 bits (727), Expect = 1.240e-87 Identity = 139/256 (54.30%), Postives = 177/256 (69.14%), Query Frame = 2
Query: 863 EFLCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKSGKHCVEFRRSGEKRWVNMLKTAFYIVERAQPSGGEVKEMEPDPTEGLAPVE-RWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMELQPGAYAIKQYVPGQLMSI 1627
+F+C ECG ++ LQ+H+ RKTAWSN LIGCR++CLVD +EWHEG V Q+HKSGKH VEFR+ EKRW+ M K AFYI+ER G E E + D TEGLAPVE W + E+IS ++ A S+L + YG +QETGH T GHTC+TD D+L A+ VKGSLLYGELLPRG NKA GP LN A ++DLGMGTGK+ +Q FLQF NL ++G+ELS R++L E AL ++ L Q PG+ + +
Sbjct: 65 QFICNECGYATSHLKVLQVHLQRKTAWSNTSLIGCRINCLVDLKEWHEGFVLQFHKSGKHYVEFRQVNEKRWLIMKKIAFYILERPASEGKEESEFKEDETEGLAPVEDNWVFCEDISLDYTFAQSVLFKIYGNSIQETGHLTKGHTCLTDADRLNAQYVKGSLLYGELLPRGANKAFGPDRLNTSSASVLFDLGMGTGKILIQAFLQFKNLRYIFGIELSAGRYKLAEEALLRMVRLLGEDNYHVQINPGRFIIV 320
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A7S3ZW16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZW16_9STRA) HSP 1 Score: 281 bits (720), Expect = 1.380e-85 Identity = 144/259 (55.60%), Postives = 181/259 (69.88%), Query Frame = 2
Query: 863 EFLCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKS-GKHCVEFRRSGEKRWVNMLKTAFYIVERAQPSGGEVKEMEPDPTEGLAPVERWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMELQPGAYAIKQYVPGQLMSIETL 1636
+F+C+E G E+ ++ L+ H+ KTAWSN GL+GCRVS L++NREW EGLV QYH+S GKHCVEFR SG +RW+ ML+TAFYIV+R E KE E P A E W + E++S F A S+LH YG R QETGHKT+GH CVTD D+ A E +GSLLYGELLPRGV+KA+ +HL+A +A ++YDLG GTGKVA+Q FLQFPNL RVYGVELS ARF + E AL AL I + PG + + ++
Sbjct: 18 KFVCHEDGTEWADLEGLRRHLRAKTAWSNAGLVGCRVSVLLENREWSEGLVAQYHRSSGKHCVEFRHSGARRWLLMLRTAFYIVDRGT-CDEETKEPEGLPVLRNARDEPWTFAEDLSLAFAKAQSVLHDCYGGRTQETGHKTLGHVCVTDDDRRRATEDRGSLLYGELLPRGVHKALDARHLDAARASSVYDLGCGTGKVALQAFLQFPNLKRVYGVELSLARFHVAERALLALAARDDCDAHITRREPGSSIEVTSV 275
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A8J2WX67_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WX67_9STRA) HSP 1 Score: 281 bits (720), Expect = 2.410e-82 Identity = 144/259 (55.60%), Postives = 181/259 (69.88%), Query Frame = 2
Query: 863 EFLCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKS-GKHCVEFRRSGEKRWVNMLKTAFYIVERAQPSGGEVKEMEPDPTEGLAPVERWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMELQPGAYAIKQYVPGQLMSIETL 1636
+F+C+E G E+ ++ L+ H+ KTAWSN GL+GCRVS L++NREW EGLV QYH+S GKHCVEFR SG +RW+ ML+TAFYIV+R E KE E P A E W + E++S F A S+LH YG R QETGHKT+GH CVTD D+ A E +GSLLYGELLPRGV+KA+ +HL+A +A ++YDLG GTGKVA+Q FLQFPNL RVYGVELS ARF + E AL AL I + PG + + ++
Sbjct: 18 KFVCHEDGTEWADLEGLRRHLRAKTAWSNAGLVGCRVSVLLENREWSEGLVAQYHRSSGKHCVEFRHSGARRWLLMLRTAFYIVDRGT-CDEETKEPEGLPVLRNARDEPWTFAEDLSLAFAKAQSVLHDCYGGRTQETGHKTLGHVCVTDDDRRRATEDRGSLLYGELLPRGVHKALDARHLDAARASSVYDLGCGTGKVALQAFLQFPNLKRVYGVELSLARFHVAERALLALAARDDCDAHITRREPGSSIEVTSV 275
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A7S3NGR3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NGR3_9STRA) HSP 1 Score: 275 bits (704), Expect = 3.400e-82 Identity = 137/237 (57.81%), Postives = 173/237 (73.00%), Query Frame = 2
Query: 866 FLCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHK-SGKHCVEFRRSGEKRWVNMLKTAFYIVERAQPSGGEVKEMEPD---PTEGLAPVERWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFAL 1564
+ C+E G+EF + +LQ H+ KTAWSN+ L+GCRVS L++NREW +G+VTQYH+ SGKHCVEFR++ +RW+ ML+TAFYIV+R + E + EPD T G E W + E++S + A S LH YG RVQETGHKTVGHTCVT+ DK A + +GSLLYGELLPRGVNKA+ +H++A +A ++DLGMGTGKV MQ FLQFPNL RVYGVELS AR+ L E A L
Sbjct: 32 YTCHEDGVEFDDLDQLQRHLKAKTAWSNRNLVGCRVSVLLENREWSDGMVTQYHRTSGKHCVEFRQTNARRWLVMLRTAFYIVDRCNSTLSE-ETKEPDGIFTTPGKNCTEAWTFAEDLSLLYAKAQSTLHECYGSRVQETGHKTVGHTCVTEEDKRRASQNRGSLLYGELLPRGVNKALDERHMDARRATILFDLGMGTGKVPMQAFLQFPNLKRVYGVELSVARYRLAEKAYLNL 267
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A7S0SP71_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SP71_9STRA) HSP 1 Score: 275 bits (703), Expect = 3.690e-79 Identity = 141/239 (59.00%), Postives = 168/239 (70.29%), Query Frame = 2
Query: 869 LCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKSGKHCVEFRRSGEKRWVNMLKTAFYIVERAQP--SGGEVKEMEPDPTEG-LAPVE-RWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMEL 1573
LC ECG F + +L LH+ RKTAWSN L+GCR+SCLVD +EWHEG VTQ+HKSGKH VEFR GEKRW+NM K AFYIVER Q E K+ + +G LAP+E W Y E+++ EF SLL + YG +QETGHKT GH CVTD DK AR KGSLLYGELLPRG NKA PK L+A A ++DLGMGTGK+A+Q FLQF NL VYGVELS R+ L E A ++++
Sbjct: 64 LCNECGAPFKDLNDLLLHLKRKTAWSNSSLVGCRISCLVDYKEWHEGFVTQFHKSGKHFVEFRLVGEKRWLNMKKVAFYIVERPQMLMDHCEFKDDDYGDIDGSLAPIEDNWVYVEDLTLEFAFVQSLLFKIYGASIQETGHKTKGHVCVTDSDKERARVGKGSLLYGELLPRGANKAFSPKRLSAESATCLFDLGMGTGKIAIQAFLQFRNLRYVYGVELSVGRYLLAEEAAQRMVKI 302
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A7S2SB25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SB25_9STRA) HSP 1 Score: 267 bits (682), Expect = 8.480e-77 Identity = 131/265 (49.43%), Postives = 185/265 (69.81%), Query Frame = 2
Query: 869 LCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKSGKHCVEFRRSGEKRWVNMLKTAFYIVER-AQPSGGEVKEMEPDPTEGLAPVERWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMELQP-GAYAIKQYVPGQLMSIETLPQRPNYE 1657
+C ECG E V+E+QLHM RKTAWSN+ L+GC VS L+D R+W +G+VT Y K+GKH V F+ S +KR ++MLKTAFYIVER + + E KE D + LAPVE+W++ E+IS E+ A +++HR +G ++ ETGH+TVGH C+++ D+ A++ K S+LYGELLP+GVN+A+ HL+ ++ DLGMGTGKV +Q FLQ+ NL V GVELS +RF + EAAL L L P G + I + PG+ + + +P++ E
Sbjct: 126 VCNECGFESKDVREMQLHMQRKTAWSNRSLVGCHVSVLLDGRDWQDGVVTHYAKNGKHVVHFKLSDQKRGLHMLKTAFYIVERPSDMNSSESKEAHEDSS--LAPVEKWNFCEDISHEYIQAQTVVHRVFGNKIHETGHRTVGHMCLSEEDRQLAKKTKCSMLYGELLPKGVNRALDAAHLHVKAGSSLVDLGMGTGKVVVQAFLQYSNLNYVLGVELSSSRFRVAEAALLKLKNLHPPGKFEIVCHRPGREIVLREVPKKEQIE 388
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Match: A0A6U4GL22_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GL22_9STRA) HSP 1 Score: 248 bits (633), Expect = 1.030e-70 Identity = 129/253 (50.99%), Postives = 164/253 (64.82%), Query Frame = 2
Query: 842 LSAAAAGEFLCYECGLEFGSVQELQLHMVRKTAWSNQGLIGCRVSCLVDNREWHEGLVTQYHKS-GKHCVEFRRSGEKRWVNMLKTAFYIVERAQ-PSGGEVKEMEPDPTEGLAPVERWHYQENISPEFCMALSLLHRAYGCRVQETGHKTVGHTCVTDRDKLAAREVKGSLLYGELLPRGVNKAMGPKHLNAGKAGTIYDLGMGTGKVAMQVFLQFPNLTRVYGVELSQARFELGEAALFALMELQPGAYAI 1594
LSA E +C ECG F V LQ+H+ KTAWS L+GCR+ LVDN EWHEG V +H+S GKH VEF GE RW+ M KTA Y++ ++ E KE++ + G E + Y E+IS +FC+A S L+ YG RVQETGHKT GH C+T DK A LLYGELLPRGVNKA+ P L+A T+ DLGMGTGK+ +Q FLQ+PNLT VYGVEL+++R+E+ A +L +L P +Y I
Sbjct: 47 LSALVENELVCIECGRTFRDVTSLQMHLKLKTAWSCTSLLGCRICALVDNLEWHEGTVRSFHRSSGKHLVEFEGRGEARWMRMSKTALYVIRPSKIKEAQETKEVDGIES-GPRSFEHYDYVEDISEDFCLAQSRLYHIYGRRVQETGHKTSGHVCITMNDKEQANAAYSCLLYGELLPRGVNKALSPARLHAKTRTTLIDLGMGTGKICIQAFLQYPNLTFVYGVELAESRYEIAVNAARSLCKLFPTSYEI 298 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.62.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig68.62.1 >prot_P-littoralis_Contig68.62.1 ID=prot_P-littoralis_Contig68.62.1|Name=mRNA_P-littoralis_Contig68.62.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=478bp MEPPGENRDGVDRMEWPRDPPPATAVAFVDPAVAGKLSRLTTDSAPSHDSback to top mRNA from alignment at P-littoralis_Contig68:362328..371722+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig68.62.1 ID=mRNA_P-littoralis_Contig68.62.1|Name=mRNA_P-littoralis_Contig68.62.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9395bp|location=Sequence derived from alignment at P-littoralis_Contig68:362328..371722+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig68:362328..371722+ >mRNA_P-littoralis_Contig68.62.1 ID=mRNA_P-littoralis_Contig68.62.1|Name=mRNA_P-littoralis_Contig68.62.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1434bp|location=Sequence derived from alignment at P-littoralis_Contig68:362328..371722+ (Pylaiella littoralis U1_48)back to top |