mRNA_P-littoralis_Contig68.35.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig68.35.2
Unique NamemRNA_P-littoralis_Contig68.35.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: D7FY68_ECTSI (Similar to Mitochondrial ornithine transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY68_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 1.090e-148
Identity = 240/313 (76.68%), Postives = 264/313 (84.35%), Query Frame = 3
Query:  408 HLVAGTVGGVSGALVSYPLDTVRVRMQTNGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSS--------AASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLL-RGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSLMRRDWPR-----VGKPGAEME 1304
            HLVAGT GGVSGALVSYPLDTVRVRMQT GK +GA RTA++L +EAG+AGFYRGVLSPMVGTG++KAAVFGGYGLCQ+LVRR TGK  D+ +L LV LG+AAMGSGLVGSFVVTPVER+KVVMQAA SSS        A +GGGYANAWGCARGLV+EHGLR GLYAGLGPTLLREVPGYAFYFATYEACKR LL  G G+DS+R G V+ KTA+SGA AGIAAWLP YPADVVKSRMQS   SG GMISTAS+MWKTEG APFYRGLSPTI RAMVNHAATFLVYEA+MS + R   R      G+ G+E+E
Sbjct:  109 HLVAGTFGGVSGALVSYPLDTVRVRMQTCGKTLGAARTASMLFQEAGMAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTGK--DNEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSSPSASSSLAARAGGGYANAWGCARGLVAEHGLRGGLYAGLGPTLLREVPGYAFYFATYEACKRVLLGNGSGEDSSR-GPVLLKTAVSGALAGIAAWLPTYPADVVKSRMQSAGGSGAGMISTASVMWKTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMSFIMRRGRRGEVASSGREGSELE 418          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A6H5KAN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN8_9PHAE)

HSP 1 Score: 382 bits (980), Expect = 2.270e-126
Identity = 202/255 (79.22%), Postives = 224/255 (87.84%), Query Frame = 3
Query:  528 LLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAAS--------GGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLL-RGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSLMRR 1265
            +L +EAGVAGFYRGVLSPMVGTG++KAAVFGGYGLCQ+LVRR TGK  D+ +L LV LG+AAMGSGLVGSFVVTPVER+KVVMQAA SS+ +S        GGGYANAWGCARGLV+E GLRRGLYAGLGPTLLREVPGYAFYFATYEACKR LL +G G+DS+R G V+ KTA+SGA AGIAAWLP+YPADVVKSRMQS  ASG GMISTAS+MWKTEG APFYRGLSPTI RAMVNHAATFLVYEA+MS++ R
Sbjct:    1 MLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTGK--DNEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSPLAARAGGGYANAWGCARGLVAERGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRVLLGKGSGEDSSR-GPVLLKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMISTASVMWKTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMSVIMR 252          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A0D2VZ19_CAPO3 (Solute carrier family 25 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VZ19_CAPO3)

HSP 1 Score: 185 bits (470), Expect = 2.950e-49
Identity = 125/312 (40.06%), Postives = 170/312 (54.49%), Query Frame = 3
Query:  396 KNRRHLVAGTVGGVSGALVSYPLDTVRVRMQTN--GKLMGAGRTAAL--LLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYG-LCQSLVRRATG---------KAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQS------TAASGG-------GMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
            K  +HL+ GTVGG+ G + SYP DTV+VR+QT   G  +  G       ++K  G    Y G+LSP+VG   VKA VFG YG + Q L+ R  G         + +    L+     +A+  +GLV + VVTPVERVKV MQA+       G  + +   C   LV   G+  GL+ G  PT+LREVP Y  YF +Y+  KR   +  GQD +     +   AL+G  AG+ AW+P+YP DV+KSR+Q+       AAS G       G++  A   ++ EG   F+RGL+PTIARA   HAA FL YE  +
Sbjct:   75 KPAQHLLGGTVGGIMGIVASYPFDTVKVRIQTQPPGSALYTGMVDCFRKIIKSEGALALYSGMLSPVVGVAGVKAVVFGSYGGISQWLLARKQGVVAGSEQPQQQQQPVKLSGFENALASCSAGLVATIVVTPVERVKVSMQAS------GGKAFKSTLDCVLSLVRTAGISGGLFKGFVPTVLREVPSYGAYFISYDMAKRAFCQ-PGQDVSTLSPGLL--ALAGGIAGVMAWVPIYPIDVIKSRIQAQPSSALVAASSGSSSRPYSGVVDCAVRSYRAEGLGVFFRGLTPTIARAFPCHAAVFLGYELTL 377          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A830I1W1_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I1W1_9CHLO)

HSP 1 Score: 177 bits (448), Expect = 3.510e-46
Identity = 106/290 (36.55%), Postives = 154/290 (53.10%), Query Frame = 3
Query:  396 KNRRHLVAGTVGGVSGALVSYPLDTVRVRMQTNG--KLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHG-DLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFL--LRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
            K  RH V GT+GG+ G  VSYP DTV+VRMQT     ++GA    A   K  G+A FYRGV++P+   G++KA  FG YG C  +     G +   G   +   + +A   +G   +FV+ P + +K+ MQA    S   G  Y N+W CA+ L+ E G+   L+ G G T+ R+ P    Y+  Y+  K+ +   + DG+ +       ++   +GA AG ++WLPVYP DV+KSR+Q       GM+  A    K +G    YRGL P +  +M  H   F+VYE  M
Sbjct:   98 KATRHFVGGTLGGMCGVAVSYPFDTVKVRMQTGAFNSMVGAFTHVA---KNEGMASFYRGVMAPLSAYGIIKAITFGTYGNCLDIFAGQKGTSMAEGYKPSYTEIALAGFAAGFTSTFVMAPSDSIKIAMQA---GSIGGGTQYKNSWECAKHLIKERGVAE-LFRGTGATMARDAPSMGLYYIVYDVTKKAMPPAKADGRHAP------WQMMFAGALAGASSWLPVYPFDVLKSRLQQPGNDYKGMVDCAVRTVKADGPLALYRGLGPVLMGSMPLHGTVFMVYELFM 374          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A197JQH7_9FUNG (Mitochondrial carrier n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JQH7_9FUNG)

HSP 1 Score: 169 bits (427), Expect = 4.300e-44
Identity = 104/285 (36.49%), Postives = 157/285 (55.09%), Query Frame = 3
Query:  414 VAGTVGGVSGALVSYPLDTVRVRMQT---NGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGG---MISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
            VAG++GG++   V  P+DT++ R+Q    NG+ +G        +K  G  G Y+G+ SP+VG   V A +F  Y   + +     G     G LTL  +GIA  G+G+V + + +PVE +K+ MQA +   A S   Y+    CAR L+ EHG+R GL  G   T++RE+PGYA ++A +E  KR+L    G++ A   + +     SGA  G++ W   YP D++KS +Q+      G   ++  A  +++  G  PF+RG SPTI RA+   AATF  YE  M
Sbjct:   17 VAGSLGGMAQVTVGQPMDTIKTRLQIEGPNGRFVGPMDCLRKTIKNEGFLGLYKGMASPLVGVAAVNALLFAAYSNFKKIQEPYPG-----GPLTLTQIGIAGAGAGIVNAVLASPVELLKIKMQAQYG--AGSTVRYSGPVDCARQLIKEHGIRHGLMRGYWITVIREIPGYAGFYAGFEGMKRYLTPV-GENPATYPLGLLSLMASGASGGVSYWFACYPLDMLKSMIQNQNNPPKGAFYIVDAAKQVYREGGIKPFFRGFSPTIIRAVPAAAATFTTYELVM 293          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A1Y2G881_9FUNG (Mitochondrial carrier n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G881_9FUNG)

HSP 1 Score: 167 bits (423), Expect = 1.550e-43
Identity = 109/288 (37.85%), Postives = 155/288 (53.82%), Query Frame = 3
Query:  414 VAGTVGGVSGALVSYPLDTVRVRMQTNGKLMGAGRTAALL------LKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGG---MISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
            VAG++GG++   V  P+DT++ R+Q   K   +GR A  L      +K  G  G Y+G+ SP+VG   V A +F  Y   + L     G     G LTL  + IA  G G+V + + +PVE +K+ MQA +   A S   Y+    CA+ L+ EHG R GL  G   T+ RE+PGYA ++A +E  KR+L    GQD A     +F    SGA  G++ WL  YP D++KS +Q+      G   ++  A  ++K  G  PF+RG SPTI R++   AATF  YE  M
Sbjct:   16 VAGSLGGMAQVTVGQPMDTIKTRLQIESK---SGRFAGPLDCLRQTIKNEGFLGLYKGMASPLVGIAAVNALLFAAYSNFKKLQEPYPG-----GPLTLSQIAIAGAGGGIVNAVLASPVELLKIKMQAQYG--AGSTVRYSGPVDCAQQLIKEHGFRHGLMRGYWVTVFREIPGYAGFYAGFEGMKRYLTP-QGQDPATYPHGLFSLMASGATGGVSYWLACYPLDMLKSMIQNQPNPPKGAFYVLEAAKQIYKEGGIQPFFRGFSPTIIRSIPAAAATFTTYELVM 292          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A1X2HFQ1_SYNRA (Mitochondrial carrier n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HFQ1_SYNRA)

HSP 1 Score: 164 bits (416), Expect = 1.230e-42
Identity = 97/283 (34.28%), Postives = 158/283 (55.83%), Query Frame = 3
Query:  414 VAGTVGGVSGALVSYPLDTVRVRMQ--TNGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASL--MWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
            VAG + G++  LV  P+DT++VR+Q  T  +  G    AA  +K+ GV   Y+G+ SP++G G V A +F  Y  C+  ++   G+      L+L  + +A  G+G+V S + +PVE +K+ +QA +      GG ++   GCA+ L+ + G+  GL+ G+  T+LRE+P YA ++  +EA KR+L  G  +++      + +   SGA  G+A WL  YP DVVKS +Q+      G+ +T  +  +   EG+    RGL P + R++    ATF  YE +M
Sbjct:   13 VAGNISGMANVLVGQPIDTIKVRLQLDTANRFRGGWDCAAQTIKQEGVLALYKGMASPLIGIGAVNALLFAAYSACKKAMQTHPGEV-----LSLPQIAVAGAGAGIVNSILASPVELLKIRLQAQYGK----GGEFSGPIGCAKYLIRKDGIAHGLFRGMYATVLREIPAYAGFYGGFEATKRYLTHGQLEEA-----TITQLMASGAVGGMAYWLTSYPFDVVKSVVQNQDKPPRGLYATQVMKEIVVREGYQGLVRGLGPAVVRSIPAAGATFTAYELSM 281          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A8H7Q220_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q220_MORIS)

HSP 1 Score: 165 bits (418), Expect = 1.520e-42
Identity = 104/287 (36.24%), Postives = 162/287 (56.45%), Query Frame = 3
Query:  423 TVGGVSGALVSYPLDTVRVRMQTN-GKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGG--YANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASL--MWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSLMRRD 1268
            ++GG+S  LV  PLDT++VR+Q + G+  GA   A   +K  G    Y+G+ SP+VG G V A +F     C+ +++   G+      L L  + IA  G+G++ S + +PVE +K+ MQA F   AA  G   Y     CA+ L+ +HG+  GL+ GL  T++RE+P YA ++  +EA KR +++ +G++   A VV   TA  GA  G+  WL  YP DVVKS++Q+      G   T++L  ++   G A  +RG  P++ RA+   AATF  YE  M  + ++
Sbjct:   45 SMGGMSQVLVGQPLDTIKVRLQLDSGRFKGAIDCAVQTIKNEGFFALYKGMASPLVGIGAVNALLFAANTECRRMLQDRPGE-----QLPLYKIAIAGSGAGIINSVLASPVEMLKIKMQAQFGKGAAGSGQVYYTGPIDCAQQLIKQHGVANGLFRGLWATVVREIPAYAGFYVGFEATKRSMVK-EGEE---ATVVQLMTA--GAAGGLGYWLACYPLDVVKSKVQNQVEPPKGFYVTSTLRSIYAQSGTAGLFRGFGPSMVRALPAAAATFTAYELTMRAIEKN 320          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A397TRM4_9GLOM (Mitochondrial carrier n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TRM4_9GLOM)

HSP 1 Score: 164 bits (414), Expect = 3.160e-42
Identity = 102/292 (34.93%), Postives = 159/292 (54.45%), Query Frame = 3
Query:  405 RHLVAGTVGGVSGALVSYPLDTVRVRMQTNGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGG-YANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLL-RGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMI---STASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSLMRR 1265
            +  VAG   G+S  +V  PLDT++VR+Q   +  G        +K  G    Y+G+ SP+VG G V A +F  Y   +S+   +  +      L L  + IA  G+G + S + +PVE +K+ MQA + ++A S G  Y     CA+ L+SE G+R GL+ G   T+ RE+P YA +++ +E  KR L   G   DS     +M    L+G+F G + W+  YP DVVKS++Q+      G++   +T + ++K EG   F RG+SPTI R++    +TF VYE  M ++ +
Sbjct:   18 KDFVAGNFAGMSQVIVGQPLDTIKVRLQVESRFKGPMDCFIQTVKHEGFFALYKGMASPLVGIGAVNALLFAAYSRLKSIQTTSLNE-----QLALYKIAIAGAGAGAINSVLSSPVELLKIKMQAQYGATAGSSGLIYKGPIDCAKHLISEFGIRNGLFRGFWATVTREIPAYAGFYSGFEFAKRKLTSEGSSPDSLPPSKLM----LAGSFGGFSYWICCYPFDVVKSKVQNHKNPPKGILYVFTTINSIYKNEGARAFTRGISPTILRSLPAAGSTFTVYELTMRILEK 300          
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: F0YBX9_AURAN (ZZ-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBX9_AURAN)

HSP 1 Score: 174 bits (442), Expect = 3.180e-42
Identity = 121/293 (41.30%), Postives = 160/293 (54.61%), Query Frame = 3
Query:  411 LVAGTVGGVSGALVSYPLDTVRVRMQT-NGKLMGAGRTAAL-------LLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQS---TAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSL 1256
            L AG +GG  G  V+YPLDT++V++QT N + +  G  A         +L E GVA FY GVL  M G  L+K  VF  Y   +     A       G    V L +AA  SG  G FV TPVER+KVVMQA ++     GG  A    C R ++++ G+   L  GLG TL RE+P Y FYF+ YE     ++ G    S  A ++     L GA AG A+W+PVYP DVVK+ +QS    A  G G +  A  +++  G   F+ G+SP +ARA+VNHA TFLV+E   SL
Sbjct: 1493 LAAGCLGGSIGVGVAYPLDTIKVKIQTYNSRALADGGGAPRKRNVIRSVLDEEGVAAFYAGVLPTMAGQALIKGVVFLVYDSAKRFFAPAACGLTSCG----VGLALAACASGAAGGFVCTPVERLKVVMQAGYA-----GGPLA----CFRDIIAQDGVSGLLTRGLGATLAREIPAYFFYFSAYE-----VVSGALAGSVPAALIPL---LGGATAGAASWVPVYPIDVVKTAVQSETGAAGDGAGALDVARALYRQGGVGVFWDGISPKLARAVVNHAVTFLVFEQTCSL 1764          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY68_ECTSI1.090e-14876.68Similar to Mitochondrial ornithine transporter 1 n... [more]
A0A6H5KAN8_9PHAE2.270e-12679.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0D2VZ19_CAPO32.950e-4940.06Solute carrier family 25 n=2 Tax=Capsaspora owczar... [more]
A0A830I1W1_9CHLO3.510e-4636.55Uncharacterized protein n=2 Tax=Pycnococcus provas... [more]
A0A197JQH7_9FUNG4.300e-4436.49Mitochondrial carrier n=1 Tax=Linnemannia elongata... [more]
A0A1Y2G881_9FUNG1.550e-4337.85Mitochondrial carrier n=1 Tax=Lobosporangium trans... [more]
A0A1X2HFQ1_SYNRA1.230e-4234.28Mitochondrial carrier n=1 Tax=Syncephalastrum race... [more]
A0A8H7Q220_MORIS1.520e-4236.24Uncharacterized protein n=1 Tax=Mortierella isabel... [more]
A0A397TRM4_9GLOM3.160e-4234.93Mitochondrial carrier n=1 Tax=Glomus cerebriforme ... [more]
F0YBX9_AURAN3.180e-4241.30ZZ-type domain-containing protein n=1 Tax=Aureococ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig68contigP-littoralis_Contig68:173355..180804 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY68
PFAMsMito_carr
Model size1833
Max annot lvl2759|Eukaryota
KEGG koko:K15109
KEGG TC2.A.29.8
KEGG Pathwayko04714,map04714
Hectar predicted targeting categoryother localisation
Exons9
Evalue7.18e-136
EggNOG OGsKOG0758@1|root,KOG0758@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-24_003600.1
Descriptionmitochondrial transport
Cds size861
COG categoryU
BRITEko00000,ko00001,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig68.35.2prot_P-littoralis_Contig68.35.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig68 176912..180314 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791411.9408207-UTR-P-littoralis_Contig68:173354..1734961680791411.9408207-UTR-P-littoralis_Contig68:173354..173496Pylaiella littoralis U1_48UTRP-littoralis_Contig68 173355..173496 +
1680791411.9599705-UTR-P-littoralis_Contig68:174707..1748781680791411.9599705-UTR-P-littoralis_Contig68:174707..174878Pylaiella littoralis U1_48UTRP-littoralis_Contig68 174708..174878 +
1680791411.9748826-UTR-P-littoralis_Contig68:175933..1760261680791411.9748826-UTR-P-littoralis_Contig68:175933..176026Pylaiella littoralis U1_48UTRP-littoralis_Contig68 175934..176026 +
1680791411.9890306-UTR-P-littoralis_Contig68:176061..1761361680791411.9890306-UTR-P-littoralis_Contig68:176061..176136Pylaiella littoralis U1_48UTRP-littoralis_Contig68 176062..176136 +
1680791412.0017526-UTR-P-littoralis_Contig68:176910..1769111680791412.0017526-UTR-P-littoralis_Contig68:176910..176911Pylaiella littoralis U1_48UTRP-littoralis_Contig68 176911..176911 +
1680791412.0822089-UTR-P-littoralis_Contig68:180314..1808041680791412.0822089-UTR-P-littoralis_Contig68:180314..180804Pylaiella littoralis U1_48UTRP-littoralis_Contig68 180315..180804 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791412.0123718-CDS-P-littoralis_Contig68:176911..1770951680791412.0123718-CDS-P-littoralis_Contig68:176911..177095Pylaiella littoralis U1_48CDSP-littoralis_Contig68 176912..177095 +
1680791412.0286481-CDS-P-littoralis_Contig68:177580..1776811680791412.0286481-CDS-P-littoralis_Contig68:177580..177681Pylaiella littoralis U1_48CDSP-littoralis_Contig68 177581..177681 +
1680791412.041254-CDS-P-littoralis_Contig68:178099..1782511680791412.041254-CDS-P-littoralis_Contig68:178099..178251Pylaiella littoralis U1_48CDSP-littoralis_Contig68 178100..178251 +
1680791412.0530498-CDS-P-littoralis_Contig68:179236..1793881680791412.0530498-CDS-P-littoralis_Contig68:179236..179388Pylaiella littoralis U1_48CDSP-littoralis_Contig68 179237..179388 +
1680791412.070296-CDS-P-littoralis_Contig68:180042..1803141680791412.070296-CDS-P-littoralis_Contig68:180042..180314Pylaiella littoralis U1_48CDSP-littoralis_Contig68 180043..180314 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig68.35.2

>prot_P-littoralis_Contig68.35.2 ID=prot_P-littoralis_Contig68.35.2|Name=mRNA_P-littoralis_Contig68.35.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp
MQTNGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGL
CQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQA
AFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFY
FATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVV
KSRMQSTAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFL
VYEAAMSLMRRDWPRVGKPGAEMEAEMEAESAAWEG*
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mRNA from alignment at P-littoralis_Contig68:173355..180804+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig68.35.2 ID=mRNA_P-littoralis_Contig68.35.2|Name=mRNA_P-littoralis_Contig68.35.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7450bp|location=Sequence derived from alignment at P-littoralis_Contig68:173355..180804+ (Pylaiella littoralis U1_48)
CACTGATGTGCACAGCACCTCTCCCTCTCTCCTTTCTTCACGACGGACGT AACGACACAGCAGTAGAGAACAACAACCGGAAGCGAAGAAAGCATATGTG TACAGCATTCTGCATTTCTCGGCGGTAAAGCGTGTGTACGCGGTGAGTGA GTGCCCACAGAGACAAATTTCAAATTTCACCCTCGGCTTCCTGATTTATC ACCCTCAGAGGTCTTTACATCCAGCAAGTGTTCCTGGTTGTAGCAGTTGT GAGAGCGACAGAACAGAGTACACGAGGATCATGCGATCATGTTTCTGGTC CCACGTGCACCCATGTATCAGCTCAGCTTGCTGCCGTGCGCGGCACGAAT CCCACGTTTTTGTGTCTCGGGCATCCCTCTTCTAGTCCTCCTCTTTTGGT GTGGTTGTGCTCTGCTGCTTCAAAATAGAGAGTGTGTCATTCATGTCTTG TTGCTGTTGGTTGTGACACACGCCTCCACCTCCGTTTATCACATGTGCAC ACCATCTTTATCTGTTCATGTTCAGAATACCGCGACAGCAGTACTCTGTA CCCGTTCGCGCATGTCCCCGCGAGCAAGCAGTTCTTATCATAGCACAAAA GGGACACATGTGGTCCGTCTACGCTTTGTGCGCTGGCATGTTCTGGTCCG GTGGTGTTGCTACATGGAACTCATTTGCAGCGGAGTATTGCGTACGTTTC GCGAAATCTACATCTCTTTATTTGTATTTATCTACAAACACGAAAAAAAA AAACTCCTGTGTTGCCTTCCCCCTGTGTGACCCCAGTTGGAGCGTCGACC TGCCCGAAAGGTATAGAGTGGCGTCCAATTCAAGGGACGACAACACACAC ACGTCAATGTGTCCGCCTCTCTCCAAAATAAATTGCTTGTTCTTGGTTCT CACATTGCTCATCCTGCATCGCCAAGATCTACTGATGTACACATTTTACG CATGTACTGTCAGCGGATCATATGAGATACATCTCGAGCAGATCCGAAAA AGGCCATTGAATGTACTTGTAGATGAAGAAGTATTTCGTACAATACAAGG AAGAAGAGAGGGTGGACAGCAGGCCGATGAGGGTACGCCTTCGAGAAAAC CCTTCGCGTAAAGCGGCCGATGTGATACGTATGCAATACGAAAACAAATA ATCGTGCAGCGATGCACACAACACGAAGAACGCACACAATACACACGCCC GATACGAAACGCGCCCAACAACAGACGGCGTCAAACGACTGCTGTACTAC TACTACCGGTATATGATATCACACCGTATATATACGTACTTGTATACAAA CGAATCGAGTATGTACTTGGTTTGGTTTGTATTTTCTCGCGCTTACCTCG CAGATGTTGGGGCCACTGGTGCCAGTCCGCCGGAAAAGGAGGCGATGGGG CTCTTCTCTCTCTGCGGTGGTCATGGTTGCCTTCGCGGTGCTCGGCCAAC AGTCGGTGGCAGCAGCAGCAGCAGCAGCAGGGCAGAAGGAGGAGACCACG CCAGCAGCAGCAACAATAGCGAAGGTAAATGGTGGGGCGCTCGTAAGTTA CAGCAGTAGTGCCGTCCTTTCTTGCACCCATCGGTGGCGATCTTTTTCGC CAACAGCAGACGAGTGATGTCGAAACATTTGGATGGGCATGGGGGCATTG TTCTTCGCGCAAAGGCTTCGGATACCACCCCCGAAAACATCCCCCAGTAT TGAAATGGTTGAAAACTATCTCGTAGCGTAGATGGAATTTCCGAGCTGCG TTGGATGGAGAACGAACTGGAAGAGAGCCGGTGCTGTTGATGGTAGTATC ATATCGGCCATCACGTTGGTGCACTTAAAGGGAGTGGGACATGAGAGGGA TGCTTTGATACGATGGAACAGCAGCAGCGGCGGCGGTCGTGACACCTTCT GCAAAATATGTGGTGAACGATCTCGAGCCGCATCCAACGGACGGGCCATA CACTGCACGTTTTTGCTATTTCATATGATATCCCCTCCGAATTTCAGGGA GGAGGGTCAAGCCTAGACCATGTAGACAGCCTGGTACCGCCGTAGGTCGC ATAAGAAACCACACCCCGGCGATAACATGTTTGGTTCGAAAAAGCACCAC CTGTTGTTCTTATGGTGTTTAGGGGCTGTGGCATGTAAGGTAACCCGACT AATAAACTTAATTCTGAAAACGTTTCTGCTATTTGGGTGCATTTTGAGCC ACCAATGAAGAAATCACGCGGTGCGGCTTTCTGTAGGGGTGTTAAGGGGG TGTGGCATCTCAGGGGGGGGTGATTTCTTATGCGACCTACGGTAGGATTA TGGCGGGGACACATGGTTACCGGTCGCGGTTGGCGAGGCAGAGCGACGCA AAGTGTAAATTGTTCGTGCGTATGATACACTGACTGGCTGGCGCACGCGT CAAGAAAAGTGCGTATAGTTAAAAACCCATTAGGAATACTCCACCGACAC ATTGAAAGTGCTGCGCGGGTGTCAAGACACTGCGCCAACGTCCGTGTTCG TCGCTTCGTGCGTGTGTGTGCTTGTGCTTGTGTGTGTGCGTGCGTGTTTT TCTGTGGGTGCTTGTGTGTGTTTTCGAAGGTTAACTGGCGACAAGACAGA AGCGGCGGCAGCAGCGGCCGCGGCAGCAGCAGCAGCAGCAGGAAGCGACA GCGGCGACAAAAAAAATCGGAGTCCCTCCCCCTGCGCCGCCCTCCATCCA CGTTGGAACACCTTGTTGCGGGCACCGTCGGAGGGGTCAGTGGCGCGCTC GTGTCATACCCGTTAGATACGGTTAGAGTGAGGTGGGCAGCGGCATGCTA CAGACAGCGGCGCATGATATGGCATGGCTGAGGTGCACTCATCGTAGGCC CATCTTCTACTCGCTCAACATGGCCAGAGCCCGTCTTCCAGCGTTTCTGC TTCAAAAAGTAACGATTTTATATCATAGAACACGGCCAGAGGGAGGCGAC CAAAGAGTGCAAACACAGCGGTAAAATACTGGAATGTTATTCCTGTAAAA TATTCGTGGCCCCGAGTCTATCTCCTCGATACGGCCACAGAGCAAGGCAG GTGAATAGCACGGGGCAGAATTCGTACGGTAAACCCCCTTGTTTTTTTAA TCCGTAAACGTTTGTAGCTCTTTGTTTTTCGACGCGGCGGGAGTAACGCC AGCACGATTACCGCGTTGCCGCTGCACGATGGTAGATGGACATATATCCT CGTGAATGCCCTTGACGCGGGGTTAGCAAGGATCAGGTCAGCAACGCACG GTGCGGCATCATTGCTGCTGGAAGCGCGCTTTATTTCGTTCGAGCCGCAC CGTCTTGTTTTCGGGCCGGATTGGCGACCTTGGGAGCAGGGACGGAAAAA TCGAAAACTGGTTCGGGGTCGCAAAAACCTCGCCGTTCTCACGACCTGGG GTTTGCACACCCCCATGGCTCATCCCCGTCCCTCGTCTCCGCCTTCTGTT CATTTCCATCATTTCCTCCCCTCCCCCACCAACTCACAAAAAAAAAAAAA TGAAATCCCGACCCCCCCCTTCCCCCCCTTCCCCTCCCCTCCCCTCCACC TAAAAGGATGCAGACGAATGGAAAGCTCATGGGTGCCGGTCGCACAGCGG CCCTGCTTTTGAAAGAGGCCGGCGTTGCGGGTTTCTACCGAGGCGTTCTT TCTCCGATGGTGGGGACAGGGCTCGTCAAAGCGGCCGTTTTTGGCGGTTA CGGCTTGTGCCAGAGCTTGGTGAGGAGGGCCACGGGAAAGGGTGAGAGCG CGGAGAGATCATCAGTGGCAGCGTTATTTTTCGCTTTCGTGGAAACATGA ACTATTAATACTAATTTTTTCATCGTTGTCAGACGTGCCGTGCGTTCTTG CTCTTGCTACGTGTATCGCTGCCTTGAAAATACTTACAGCACTTTTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGCTGTTGTTACGGGTACGGTCCGCGGTCTGCGGTCTGCGGTCCACA TTTCATTATCTACTTTCAAAATTTATATTATCGGACCAATCACTACCGCC GAGTCGCGTTTCGCGGTGCACCAACGCACAAAGCGCGTTGGCACATCACC CATCCGCTTCGTTTTTCGCTCGACATGCGGGTCAATGGTCTACTGCCCCC CCTCCCCCGTCCCCGTCCCCGTCCCCGTCCCCGTCCCCGCCACCCGTCAC CCCTCCGCTGTCCTCGCCCGCATAAGCGAAAGACCACGGAGATTTAACGC TGGTTCATCTCGGGATCGCCGCGATGGGCTCTGGTCTGGTCGGTTCTTTC GTGGTGACCCCCGTGGAGCGTGTCAAGGCGAGTTTCTGCTCCTTCCTCGG CCGAAGACGCATCTCAATTTCGTCTGTGTTTTGTGTTTTTTTGCCGAGCC GAGTTGAGCCGAGTGGAGCCTAGCCGGTAAAGGCGCCGACGCGGAGTCTC CAACTCACCCTTTACCTTTTTTTGCTTGGTGTGTGTGTATGCATCATGCA GGTGTTGTGTGCAGGTACAGCCGTGGGCGAAGGTAGCCCTCGTCACTCAA GCCAGCTATCATACCACGTTTAATTTTGCAGATATGCAGGTACAGCCGTG GGCGTAGATGGCCTCGCCACTCAAGCCAAGTGCTGTACATACCACGGTTT ATTTTTTTTATACCGTGTTTCACGGTGTTATCACGGCTCCCAGAATAAGC CTACCCCCCCCCCCCCCCGCCCCCCCCCCCGCCCCCGATTCACAGGTGGT TATGCAGGCGGCGTTTTCCTCCTCAGCTGCAAGCGGCGGAGGCTACGCGA ATGCCTGGGGTTGCGCTAGGGGCCTCGTTTCAGAGCATGGATTGCGTAGG GGCCTGTACGCCGGGCTTGGTCCCACGCTGCTGAGGGAGGTGCCGGGGTG AGCGAGCATACCTAGATTACGAAACCCTTGTACACAGGGGTAGTTTAGTC TCCCGTTTGTCTCGGTCGTTAGTCCTCGTGTGTCGCGTGTACATGCCCAA GCGCACAGGCAGACATACACACACGCACGTACACAAACTGAACAACAAGA ACAAGAACAATAACAACAGTAAACGCACGTGATGAATCCCGCCTTGTCCC GACTGAGTTATTTCCCGTTGGTCAGCCAGTACGGTCTAGCAGTTGTCGCG CTGCACGCCCGACGCCAGCAGAACGAGGTGCCCAGCATATCATACACTGA TGAGTGTTGCTGTTGTTGCTGTTGTTGTTGCCGTTGCCGTTGTTGCCGTT GTTGTTGTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTGGTTGTTGTTGTTGTT GTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGT TGTTGTTGTTGTTGTTGTTGTTGTTGCTGTTGTTGTTGTTGTTCCAGTTT TTATTATTTTCGATTTAGAGAGAGAGTTGTCTGACCATCCGTTCTGTGAA GCAAGTAGCAGATGTCGGTGATGCTAGCTAGCGTGTGTTTTCGGACACGC TACGATAGTAACTCTGCTCAGTGGGTCCAAGAGCCACAGACGCCCCCCCC CCCTTCGCCCCTGTCGTCGTCCCCCCACTGTCCACTTTTGGCTTGTTGTT TTTGGTGCCCAGCCAAGCTAGCTTGATTGCCACATCTAACGGCACCTTGG AGCTGGAATCGACAACATCGATTTATTCTCATCTCCTATGTCTGTGATGT GGTTTAAACGTCCTTTCGTGATTGTATGTTTCTTGTACGTACGTGCCCGT ACGCTGCTTCGCGCCGCTGTTTGCACCCACAGATACGCTTTCTATTTTGC AACTTACGAAGCGTGCAAGCGATTTCTGCTTCGCGGGGATGGGCAAGACT CTGCTCGAGCGGGTGTCGTGATGTTCAAGACGGCCTTGTCGGGAGCTTTC GCTGGGATAGCGGCCTGGCTGCCTGTGTACCCCGGTAAGGGCCGCCGTTA TCTGTTGTTGTTGTTGTTGTTGTTCTTCTTCTTCTTCTTTTTCTTCCTCT TGCTGTTCTTTGTTCTTGTTCCTGTGGTAGGTAGAGTTTCGGTTGCTGAT GCCGTTGGTGTTGAACCACCAGCTCCAAGCGATACCGGCAAGTACGCCCG AGAGCAACAAGAACTAAACGTGTCCACCGACAAGGCTTGATTATGCTGCT GCGATGCCACCGCCAGCAATGTTGTGACAAACCATGCTAGCGTGGCCTCC TCTTCGTAAGACGATGGAGTGCCGGTTCACGACAACGTCGTACTAGTTGG CGCCCGCCGGTAATAAAAACATGAGACAAGGTAATGAGGCTCAGATTCAT GAGGCTTGTATTGTCACGAAACATAACAGGTACTGCGTGAGAAAGCTTCG TCAAAGGGGGAGATTTTCACACCGTCGGCTCAGCTCTCAATCTCGGTCAC TGAGAGGGTTATGATGTCATAGCTCAACACACCAGAAAAAAGTAAGGAAT TGTGTCCTCCACTATACGTTTACGTTTACTAGTTCCGTCTGCGGGCGCCG CGTGCACGGCAGTGACTCGCCTCCACGCCAACGGTATCTGATTTGCGACC GTCGCCAACCCCCGCCCCACCCCCCTTCGTCTTCTCAGCGGACGTGGTAA AGAGCCGCATGCAGAGCACCGCGGCTTCGGGCGGCGGCATGATCTCGACG GCCTCCTTGATGTGGAAAACCGAGGGGTTTGCGCCGTTCTACCGAGGCCT GTCTCCGACGATTGCGCGAGCGATGGTTAACCACGCGGCGACGTTTCTGG TGTACGAGGCGGCGATGAGTCTGATGCGAAGAGATTGGCCCCGCGTTGGT AAGCCGGGAGCAGAAATGGAAGCAGAAATGGAAGCAGAATCGGCAGCCTG GGAAGGATAGGGGCAAGAGGAGCCATGACGCACCGGTGTACTACTCTGCA GCGCCTTTTGGTGTACGAGGCGACTATAGTACTAGTGGGACACCACTTTT ACGAGGATGATAGTTTGTGAGGCATATCATAGCGATCGAGGGACAACAGC GGGAGCAGAGGGAGAGAGAGAGAGAGACGAGGGGGTGTGACGGCAGCGGT ATTTTACAGCAGTGCCGGAGCTTTTTGTGCGCGAGGCGGCTTATCGTGGA GCCCCATCATGACATGACTCAGCAGCACCGTGATGGAGGGTCGATCAACT CCAGAAGGCGCAGGGCAAGGAGAGTGACGAACACAGGAACACCCGGTGTG TTGCAGCGAGCGCCTCGAAGGACTTGGTGTACCAGGTACGCGGAAAGTTC TTACAGTACCGTAGTGCGAAGAAGATAACGTCTTTATTCGTTTTTTGCCC GTTCGGGGGATACGTGAACGGTTGGGGGCAGGGGGGGTGCGGCTATAATG
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Coding sequence (CDS) from alignment at P-littoralis_Contig68:173355..180804+

>mRNA_P-littoralis_Contig68.35.2 ID=mRNA_P-littoralis_Contig68.35.2|Name=mRNA_P-littoralis_Contig68.35.2|organism=Pylaiella littoralis U1_48|type=CDS|length=861bp|location=Sequence derived from alignment at P-littoralis_Contig68:173355..180804+ (Pylaiella littoralis U1_48)
ATGCAGACGAATGGAAAGCTCATGGGTGCCGGTCGCACAGCGGCCCTGCT
TTTGAAAGAGGCCGGCGTTGCGGGTTTCTACCGAGGCGTTCTTTCTCCGA
TGGTGGGGACAGGGCTCGTCAAAGCGGCCGTTTTTGGCGGTTACGGCTTG
TGCCAGAGCTTGGTGAGGAGGGCCACGGGAAAGGCGAAAGACCACGGAGA
TTTAACGCTGGTTCATCTCGGGATCGCCGCGATGGGCTCTGGTCTGGTCG
GTTCTTTCGTGGTGACCCCCGTGGAGCGTGTCAAGGTGGTTATGCAGGCG
GCGTTTTCCTCCTCAGCTGCAAGCGGCGGAGGCTACGCGAATGCCTGGGG
TTGCGCTAGGGGCCTCGTTTCAGAGCATGGATTGCGTAGGGGCCTGTACG
CCGGGCTTGGTCCCACGCTGCTGAGGGAGGTGCCGGGATACGCTTTCTAT
TTTGCAACTTACGAAGCGTGCAAGCGATTTCTGCTTCGCGGGGATGGGCA
AGACTCTGCTCGAGCGGGTGTCGTGATGTTCAAGACGGCCTTGTCGGGAG
CTTTCGCTGGGATAGCGGCCTGGCTGCCTGTGTACCCCGCGGACGTGGTA
AAGAGCCGCATGCAGAGCACCGCGGCTTCGGGCGGCGGCATGATCTCGAC
GGCCTCCTTGATGTGGAAAACCGAGGGGTTTGCGCCGTTCTACCGAGGCC
TGTCTCCGACGATTGCGCGAGCGATGGTTAACCACGCGGCGACGTTTCTG
GTGTACGAGGCGGCGATGAGTCTGATGCGAAGAGATTGGCCCCGCGTTGG
TAAGCCGGGAGCAGAAATGGAAGCAGAAATGGAAGCAGAATCGGCAGCCT
GGGAAGGATAG
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