mRNA_P-littoralis_Contig68.35.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: D7FY68_ECTSI (Similar to Mitochondrial ornithine transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY68_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 1.090e-148 Identity = 240/313 (76.68%), Postives = 264/313 (84.35%), Query Frame = 3
Query: 408 HLVAGTVGGVSGALVSYPLDTVRVRMQTNGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSS--------AASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLL-RGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSLMRRDWPR-----VGKPGAEME 1304
HLVAGT GGVSGALVSYPLDTVRVRMQT GK +GA RTA++L +EAG+AGFYRGVLSPMVGTG++KAAVFGGYGLCQ+LVRR TGK D+ +L LV LG+AAMGSGLVGSFVVTPVER+KVVMQAA SSS A +GGGYANAWGCARGLV+EHGLR GLYAGLGPTLLREVPGYAFYFATYEACKR LL G G+DS+R G V+ KTA+SGA AGIAAWLP YPADVVKSRMQS SG GMISTAS+MWKTEG APFYRGLSPTI RAMVNHAATFLVYEA+MS + R R G+ G+E+E
Sbjct: 109 HLVAGTFGGVSGALVSYPLDTVRVRMQTCGKTLGAARTASMLFQEAGMAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTGK--DNEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSSPSASSSLAARAGGGYANAWGCARGLVAEHGLRGGLYAGLGPTLLREVPGYAFYFATYEACKRVLLGNGSGEDSSR-GPVLLKTAVSGALAGIAAWLPTYPADVVKSRMQSAGGSGAGMISTASVMWKTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMSFIMRRGRRGEVASSGREGSELE 418
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A6H5KAN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN8_9PHAE) HSP 1 Score: 382 bits (980), Expect = 2.270e-126 Identity = 202/255 (79.22%), Postives = 224/255 (87.84%), Query Frame = 3
Query: 528 LLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAAS--------GGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLL-RGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSLMRR 1265
+L +EAGVAGFYRGVLSPMVGTG++KAAVFGGYGLCQ+LVRR TGK D+ +L LV LG+AAMGSGLVGSFVVTPVER+KVVMQAA SS+ +S GGGYANAWGCARGLV+E GLRRGLYAGLGPTLLREVPGYAFYFATYEACKR LL +G G+DS+R G V+ KTA+SGA AGIAAWLP+YPADVVKSRMQS ASG GMISTAS+MWKTEG APFYRGLSPTI RAMVNHAATFLVYEA+MS++ R
Sbjct: 1 MLFQEAGVAGFYRGVLSPMVGTGIIKAAVFGGYGLCQALVRRGTGK--DNEELNLVDLGVAAMGSGLVGSFVVTPVERIKVVMQAALSSAPSSSSPLAARAGGGYANAWGCARGLVAERGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRVLLGKGSGEDSSR-GPVLLKTAVSGALAGIAAWLPIYPADVVKSRMQSAGASGAGMISTASVMWKTEGLAPFYRGLSPTIVRAMVNHAATFLVYEASMSVIMR 252
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A0D2VZ19_CAPO3 (Solute carrier family 25 n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VZ19_CAPO3) HSP 1 Score: 185 bits (470), Expect = 2.950e-49 Identity = 125/312 (40.06%), Postives = 170/312 (54.49%), Query Frame = 3
Query: 396 KNRRHLVAGTVGGVSGALVSYPLDTVRVRMQTN--GKLMGAGRTAAL--LLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYG-LCQSLVRRATG---------KAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQS------TAASGG-------GMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
K +HL+ GTVGG+ G + SYP DTV+VR+QT G + G ++K G Y G+LSP+VG VKA VFG YG + Q L+ R G + + L+ +A+ +GLV + VVTPVERVKV MQA+ G + + C LV G+ GL+ G PT+LREVP Y YF +Y+ KR + GQD + + AL+G AG+ AW+P+YP DV+KSR+Q+ AAS G G++ A ++ EG F+RGL+PTIARA HAA FL YE +
Sbjct: 75 KPAQHLLGGTVGGIMGIVASYPFDTVKVRIQTQPPGSALYTGMVDCFRKIIKSEGALALYSGMLSPVVGVAGVKAVVFGSYGGISQWLLARKQGVVAGSEQPQQQQQPVKLSGFENALASCSAGLVATIVVTPVERVKVSMQAS------GGKAFKSTLDCVLSLVRTAGISGGLFKGFVPTVLREVPSYGAYFISYDMAKRAFCQ-PGQDVSTLSPGLL--ALAGGIAGVMAWVPIYPIDVIKSRIQAQPSSALVAASSGSSSRPYSGVVDCAVRSYRAEGLGVFFRGLTPTIARAFPCHAAVFLGYELTL 377
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A830I1W1_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830I1W1_9CHLO) HSP 1 Score: 177 bits (448), Expect = 3.510e-46 Identity = 106/290 (36.55%), Postives = 154/290 (53.10%), Query Frame = 3
Query: 396 KNRRHLVAGTVGGVSGALVSYPLDTVRVRMQTNG--KLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHG-DLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFL--LRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
K RH V GT+GG+ G VSYP DTV+VRMQT ++GA A K G+A FYRGV++P+ G++KA FG YG C + G + G + + +A +G +FV+ P + +K+ MQA S G Y N+W CA+ L+ E G+ L+ G G T+ R+ P Y+ Y+ K+ + + DG+ + ++ +GA AG ++WLPVYP DV+KSR+Q GM+ A K +G YRGL P + +M H F+VYE M
Sbjct: 98 KATRHFVGGTLGGMCGVAVSYPFDTVKVRMQTGAFNSMVGAFTHVA---KNEGMASFYRGVMAPLSAYGIIKAITFGTYGNCLDIFAGQKGTSMAEGYKPSYTEIALAGFAAGFTSTFVMAPSDSIKIAMQA---GSIGGGTQYKNSWECAKHLIKERGVAE-LFRGTGATMARDAPSMGLYYIVYDVTKKAMPPAKADGRHAP------WQMMFAGALAGASSWLPVYPFDVLKSRLQQPGNDYKGMVDCAVRTVKADGPLALYRGLGPVLMGSMPLHGTVFMVYELFM 374
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A197JQH7_9FUNG (Mitochondrial carrier n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JQH7_9FUNG) HSP 1 Score: 169 bits (427), Expect = 4.300e-44 Identity = 104/285 (36.49%), Postives = 157/285 (55.09%), Query Frame = 3
Query: 414 VAGTVGGVSGALVSYPLDTVRVRMQT---NGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGG---MISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
VAG++GG++ V P+DT++ R+Q NG+ +G +K G G Y+G+ SP+VG V A +F Y + + G G LTL +GIA G+G+V + + +PVE +K+ MQA + A S Y+ CAR L+ EHG+R GL G T++RE+PGYA ++A +E KR+L G++ A + + SGA G++ W YP D++KS +Q+ G ++ A +++ G PF+RG SPTI RA+ AATF YE M
Sbjct: 17 VAGSLGGMAQVTVGQPMDTIKTRLQIEGPNGRFVGPMDCLRKTIKNEGFLGLYKGMASPLVGVAAVNALLFAAYSNFKKIQEPYPG-----GPLTLTQIGIAGAGAGIVNAVLASPVELLKIKMQAQYG--AGSTVRYSGPVDCARQLIKEHGIRHGLMRGYWITVIREIPGYAGFYAGFEGMKRYLTPV-GENPATYPLGLLSLMASGASGGVSYWFACYPLDMLKSMIQNQNNPPKGAFYIVDAAKQVYREGGIKPFFRGFSPTIIRAVPAAAATFTTYELVM 293
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A1Y2G881_9FUNG (Mitochondrial carrier n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G881_9FUNG) HSP 1 Score: 167 bits (423), Expect = 1.550e-43 Identity = 109/288 (37.85%), Postives = 155/288 (53.82%), Query Frame = 3
Query: 414 VAGTVGGVSGALVSYPLDTVRVRMQTNGKLMGAGRTAALL------LKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGG---MISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
VAG++GG++ V P+DT++ R+Q K +GR A L +K G G Y+G+ SP+VG V A +F Y + L G G LTL + IA G G+V + + +PVE +K+ MQA + A S Y+ CA+ L+ EHG R GL G T+ RE+PGYA ++A +E KR+L GQD A +F SGA G++ WL YP D++KS +Q+ G ++ A ++K G PF+RG SPTI R++ AATF YE M
Sbjct: 16 VAGSLGGMAQVTVGQPMDTIKTRLQIESK---SGRFAGPLDCLRQTIKNEGFLGLYKGMASPLVGIAAVNALLFAAYSNFKKLQEPYPG-----GPLTLSQIAIAGAGGGIVNAVLASPVELLKIKMQAQYG--AGSTVRYSGPVDCAQQLIKEHGFRHGLMRGYWVTVFREIPGYAGFYAGFEGMKRYLTP-QGQDPATYPHGLFSLMASGATGGVSYWLACYPLDMLKSMIQNQPNPPKGAFYVLEAAKQIYKEGGIQPFFRGFSPTIIRSIPAAAATFTTYELVM 292
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A1X2HFQ1_SYNRA (Mitochondrial carrier n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HFQ1_SYNRA) HSP 1 Score: 164 bits (416), Expect = 1.230e-42 Identity = 97/283 (34.28%), Postives = 158/283 (55.83%), Query Frame = 3
Query: 414 VAGTVGGVSGALVSYPLDTVRVRMQ--TNGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASL--MWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAM 1250
VAG + G++ LV P+DT++VR+Q T + G AA +K+ GV Y+G+ SP++G G V A +F Y C+ ++ G+ L+L + +A G+G+V S + +PVE +K+ +QA + GG ++ GCA+ L+ + G+ GL+ G+ T+LRE+P YA ++ +EA KR+L G +++ + + SGA G+A WL YP DVVKS +Q+ G+ +T + + EG+ RGL P + R++ ATF YE +M
Sbjct: 13 VAGNISGMANVLVGQPIDTIKVRLQLDTANRFRGGWDCAAQTIKQEGVLALYKGMASPLIGIGAVNALLFAAYSACKKAMQTHPGEV-----LSLPQIAVAGAGAGIVNSILASPVELLKIRLQAQYGK----GGEFSGPIGCAKYLIRKDGIAHGLFRGMYATVLREIPAYAGFYGGFEATKRYLTHGQLEEA-----TITQLMASGAVGGMAYWLTSYPFDVVKSVVQNQDKPPRGLYATQVMKEIVVREGYQGLVRGLGPAVVRSIPAAGATFTAYELSM 281
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A8H7Q220_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q220_MORIS) HSP 1 Score: 165 bits (418), Expect = 1.520e-42 Identity = 104/287 (36.24%), Postives = 162/287 (56.45%), Query Frame = 3
Query: 423 TVGGVSGALVSYPLDTVRVRMQTN-GKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGG--YANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMISTASL--MWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSLMRRD 1268
++GG+S LV PLDT++VR+Q + G+ GA A +K G Y+G+ SP+VG G V A +F C+ +++ G+ L L + IA G+G++ S + +PVE +K+ MQA F AA G Y CA+ L+ +HG+ GL+ GL T++RE+P YA ++ +EA KR +++ +G++ A VV TA GA G+ WL YP DVVKS++Q+ G T++L ++ G A +RG P++ RA+ AATF YE M + ++
Sbjct: 45 SMGGMSQVLVGQPLDTIKVRLQLDSGRFKGAIDCAVQTIKNEGFFALYKGMASPLVGIGAVNALLFAANTECRRMLQDRPGE-----QLPLYKIAIAGSGAGIINSVLASPVEMLKIKMQAQFGKGAAGSGQVYYTGPIDCAQQLIKQHGVANGLFRGLWATVVREIPAYAGFYVGFEATKRSMVK-EGEE---ATVVQLMTA--GAAGGLGYWLACYPLDVVKSKVQNQVEPPKGFYVTSTLRSIYAQSGTAGLFRGFGPSMVRALPAAAATFTAYELTMRAIEKN 320
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: A0A397TRM4_9GLOM (Mitochondrial carrier n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TRM4_9GLOM) HSP 1 Score: 164 bits (414), Expect = 3.160e-42 Identity = 102/292 (34.93%), Postives = 159/292 (54.45%), Query Frame = 3
Query: 405 RHLVAGTVGGVSGALVSYPLDTVRVRMQTNGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGG-YANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLL-RGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQSTAASGGGMI---STASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSLMRR 1265
+ VAG G+S +V PLDT++VR+Q + G +K G Y+G+ SP+VG G V A +F Y +S+ + + L L + IA G+G + S + +PVE +K+ MQA + ++A S G Y CA+ L+SE G+R GL+ G T+ RE+P YA +++ +E KR L G DS +M L+G+F G + W+ YP DVVKS++Q+ G++ +T + ++K EG F RG+SPTI R++ +TF VYE M ++ +
Sbjct: 18 KDFVAGNFAGMSQVIVGQPLDTIKVRLQVESRFKGPMDCFIQTVKHEGFFALYKGMASPLVGIGAVNALLFAAYSRLKSIQTTSLNE-----QLALYKIAIAGAGAGAINSVLSSPVELLKIKMQAQYGATAGSSGLIYKGPIDCAKHLISEFGIRNGLFRGFWATVTREIPAYAGFYSGFEFAKRKLTSEGSSPDSLPPSKLM----LAGSFGGFSYWICCYPFDVVKSKVQNHKNPPKGILYVFTTINSIYKNEGARAFTRGISPTILRSLPAAGSTFTVYELTMRILEK 300
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Match: F0YBX9_AURAN (ZZ-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBX9_AURAN) HSP 1 Score: 174 bits (442), Expect = 3.180e-42 Identity = 121/293 (41.30%), Postives = 160/293 (54.61%), Query Frame = 3
Query: 411 LVAGTVGGVSGALVSYPLDTVRVRMQT-NGKLMGAGRTAAL-------LLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLCQSLVRRATGKAKDHGDLTLVHLGIAAMGSGLVGSFVVTPVERVKVVMQAAFSSSAASGGGYANAWGCARGLVSEHGLRRGLYAGLGPTLLREVPGYAFYFATYEACKRFLLRGDGQDSARAGVVMFKTALSGAFAGIAAWLPVYPADVVKSRMQS---TAASGGGMISTASLMWKTEGFAPFYRGLSPTIARAMVNHAATFLVYEAAMSL 1256
L AG +GG G V+YPLDT++V++QT N + + G A +L E GVA FY GVL M G L+K VF Y + A G V L +AA SG G FV TPVER+KVVMQA ++ GG A C R ++++ G+ L GLG TL RE+P Y FYF+ YE ++ G S A ++ L GA AG A+W+PVYP DVVK+ +QS A G G + A +++ G F+ G+SP +ARA+VNHA TFLV+E SL
Sbjct: 1493 LAAGCLGGSIGVGVAYPLDTIKVKIQTYNSRALADGGGAPRKRNVIRSVLDEEGVAAFYAGVLPTMAGQALIKGVVFLVYDSAKRFFAPAACGLTSCG----VGLALAACASGAAGGFVCTPVERLKVVMQAGYA-----GGPLA----CFRDIIAQDGVSGLLTRGLGATLAREIPAYFFYFSAYE-----VVSGALAGSVPAALIPL---LGGATAGAASWVPVYPIDVVKTAVQSETGAAGDGAGALDVARALYRQGGVGVFWDGISPKLARAVVNHAVTFLVFEQTCSL 1764 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.35.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig68.35.2 >prot_P-littoralis_Contig68.35.2 ID=prot_P-littoralis_Contig68.35.2|Name=mRNA_P-littoralis_Contig68.35.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp MQTNGKLMGAGRTAALLLKEAGVAGFYRGVLSPMVGTGLVKAAVFGGYGLback to top mRNA from alignment at P-littoralis_Contig68:173355..180804+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig68.35.2 ID=mRNA_P-littoralis_Contig68.35.2|Name=mRNA_P-littoralis_Contig68.35.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7450bp|location=Sequence derived from alignment at P-littoralis_Contig68:173355..180804+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig68:173355..180804+ >mRNA_P-littoralis_Contig68.35.2 ID=mRNA_P-littoralis_Contig68.35.2|Name=mRNA_P-littoralis_Contig68.35.2|organism=Pylaiella littoralis U1_48|type=CDS|length=861bp|location=Sequence derived from alignment at P-littoralis_Contig68:173355..180804+ (Pylaiella littoralis U1_48)back to top |