prot_P-littoralis_Contig117.130.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig117.130.1
Unique Nameprot_P-littoralis_Contig117.130.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length369
Homology
BLAST of mRNA_P-littoralis_Contig117.130.1 vs. uniprot
Match: A0A6H5JGI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI5_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 1.170e-84
Identity = 195/380 (51.32%), Postives = 231/380 (60.79%), Query Frame = 0
Query:    3 IERWCRGSVRRKFVEDMARFVQLLALALVFRQSDGFNAIGLVAPAARASPASSXXXXXXXXXXXXWRHAAAA--------SGRWSSPVRNSDRACRLATSSS-----HHNDHRHRRRQRHLQRCDHGAAISRIRRRPCHSSSPSSLSTGSWRGSAGRSSTSRSVSRGSSPGGDADAFEEDSGEEGG-GLATARETVPGARRKSRKKDKKGLDDNKKKSALGKAGDAIKATFNAFMAASTVVSIALAAEAFWQLHGTPLTLSNAVPTLTKLLPLTGIGVFGAAQLVGVVARVVRVIVTLPIMLSGAWVILQNAPKLLPQGSDLTGAGSLAALLATPEVLEAAAVLALLGGTVLWAVNFATGAVGTLLKGQEDEEYEDDELD 368
            + +WCR  +   ++  MARF   LALA   RQ   FN +G     A  SPA S                A+A        SG  + P     +A RL +S++         HR+RR     QRC       R+RRRP  +S            SA R  TS      SS G  +   ++  GEE G GL  + E+ PG    SR+   +G      KS L KAG+A+KA FNAFMAAST+ S+ALAAEA WQLHG PLTLSNAVPTLTKLLPLTGIGVFGAAQLVG+VARVVRVIVTLP+M+SG WVILQNAPKL P+G DLTGAGSLAALLATPEVLEAAAV+ALLGGT +WA+NFATGAVG L+ GQ     E++E D
Sbjct:    1 MRQWCRSRLDWGYLGGMARFAHALALACFLRQCGAFNPVG-----APPSPAFSSSFRQPSSLATCCGRVASATSPSRFVPSGSLACPT--PPQAARLHSSNNPGDACRPEGHRNRR-----QRCQRDGTEWRLRRRPWSTSL-----------SAVREGTS------SSSGAPSSGQDQLEGEEAGWGLPASGESEPGG---SRETKNRGRGKEGGKSVLEKAGNALKAAFNAFMAASTLASLALAAEAVWQLHGAPLTLSNAVPTLTKLLPLTGIGVFGAAQLVGLVARVVRVIVTLPVMVSGTWVILQNAPKLFPKGLDLTGAGSLAALLATPEVLEAAAVIALLGGTAIWALNFATGAVGALMPGQSKSSREEEEED 348          
BLAST of mRNA_P-littoralis_Contig117.130.1 vs. uniprot
Match: D7FYX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX7_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 7.850e-45
Identity = 147/312 (47.12%), Postives = 175/312 (56.09%), Query Frame = 0
Query:    3 IERWCRGSVRRKFVEDMARFVQLLALALVFRQSDGFNAIGLVAPAARASPA-SSXXXXXXXXXXXXWRHAAAASGRWSSPVRN-----SDRACRLATSSS-----HHNDHRHRRRQRHLQRCDHGAAISRIRRRPCHSSSPSSLSTGSWRGSAGRSSTSRSVSRGSSPGGDADAFEEDSGEE-GGGLATARETVPGARRKSRKKDKKGLDDNKKKSALGKAGDAIKATFNAFMAASTVVSIALAAEAFWQLHGTPLTLSNAVPTLTKLLPLTGIGVFGAAQLVGVVARVVRVIVTLPIMLSGAWVILQNAPK 302
            + +W R  +    +  M R    LAL    RQ   F+ +G     A  SPA SS             R A+A S R   P  +       +A RL +S++         HR+RR     +R D G    R+RRRP    S +SLS       A R  TS S S  +  G D     +  GEE G GL  +RE  PG    SR+   KG  +   K  L KAG+A+KA FNAFMAAST+ S+ LAAEA WQLHG PLTLSNAVPTLTKLLPLTGIGVFGAAQLVG+VARVVRVIVTLP+M+SG WVILQNAPK
Sbjct:    1 MRQWRRSRLDWGSLGGMVRLAHALALTCFLRQCGAFHPVG-----APPSPAVSSSFRQPSTLTTCCGRAASATSPRRLVPSASLACPTPPQAARLHSSNNPGDACRPEGHRNRR----YRRRDDGTEW-RLRRRP----SLTSLS-------AVREGTSSSSSAPAPAGQD-----QLEGEEVGWGLPASREPEPGG---SRETKNKGGGEEGGKPVLEKAGNALKAAFNAFMAASTLASLVLAAEAVWQLHGAPLTLSNAVPTLTKLLPLTGIGVFGAAQLVGLVARVVRVIVTLPVMVSGTWVILQNAPK 283          
BLAST of mRNA_P-littoralis_Contig117.130.1 vs. uniprot
Match: A0A836CM52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM52_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.310e-21
Identity = 75/183 (40.98%), Postives = 104/183 (56.83%), Query Frame = 0
Query:  187 ARRKSRKKDKKGLDDNKKKSALGKAGDAIKATFNAFMAASTVVSIALAAEAFWQLHGTPLTLSNAVPTLTKLLPLTGIGVFGAAQLVGVVARVVRVIVTLPIMLSGAWVILQNAPKLLPQGSDLTGAGSLAALLATPEVLEAAAVLALLGGTVLWAVNFATGAV-GTLLKGQEDEEYEDDELD 368
            A+ K  KK K    DN + S     G+ +++ +N  + A TV S+ LA +A  +L   P+TL     TL  LLPL   GV GAA+LV V+ R+VRV+VT+P++L GA++   + P LL    DL   G L A+LATPEVLEA A++A++ G  +W V    G V G       D +  DDE D
Sbjct:    3 AKSKRGKKTKTASSDNDESSTRS-IGEVVRSAWNGLLVALTVASVVLAVDAVVKLKTQPITLD----TLGNLLPLAAFGVAGAARLVAVLLRLVRVLVTVPVVLGGAYLAAPSIPDLLKHSPDLA-TGGLFAVLATPEVLEAIALIAVIVGAGIWIVRQLAGMVTGMASVRGNDGDDSDDEYD 179          
BLAST of mRNA_P-littoralis_Contig117.130.1 vs. uniprot
Match: A0A7S2V4B2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4B2_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.070e-11
Identity = 46/155 (29.68%), Postives = 76/155 (49.03%), Query Frame = 0
Query:  201 DNKKKSALGKAGDAIKATFNAFMAASTVVSIALAAEAFWQLHGTPLTLSNAVPTLTKLLPLTGIGVFGAAQLVGVVARVVRVIVTLPIMLSGAWVILQNAPKLLPQGSDLTGAGSLAALLATPEVLEAAAVLALLGGTVLWAVNFATGAVGTLLK 355
            D K K       D+ K  F   +    + S+  A  A ++L+  P TLSN   T+T +LP    G FG  +L+G   R+VR+++++PI++ G W +    P+ +    DL    SL  + A PE++EA  ++  +G  + W        V +L K
Sbjct:  116 DQKGKITFQSVLDSAKKAFGFLLVGVAIYSVYTAGTAVYKLYTEPFTLSNLGSTVTNVLPALTFGYFGTLKLIGAFMRLVRILLSVPIVVGGTWFLAPRLPEFIQSSPDLAST-SLLGIFAVPEIVEAIILILFVGSFLFWLTQQFLKLVESLTK 269          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig117.130.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JGI5_9PHAE1.170e-8451.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYX7_ECTSI7.850e-4547.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM52_9STRA1.310e-2140.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V4B2_9STRA1.070e-1129.68Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 185..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig117contigP-littoralis_Contig117:399035..401852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig117.130.1mRNA_P-littoralis_Contig117.130.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig117 399008..402728 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig117.130.1 ID=prot_P-littoralis_Contig117.130.1|Name=mRNA_P-littoralis_Contig117.130.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=369bp
MAIERWCRGSVRRKFVEDMARFVQLLALALVFRQSDGFNAIGLVAPAARA
SPASSSSTTFRNQSPPPWRHAAAASGRWSSPVRNSDRACRLATSSSHHND
HRHRRRQRHLQRCDHGAAISRIRRRPCHSSSPSSLSTGSWRGSAGRSSTS
RSVSRGSSPGGDADAFEEDSGEEGGGLATARETVPGARRKSRKKDKKGLD
DNKKKSALGKAGDAIKATFNAFMAASTVVSIALAAEAFWQLHGTPLTLSN
AVPTLTKLLPLTGIGVFGAAQLVGVVARVVRVIVTLPIMLSGAWVILQNA
PKLLPQGSDLTGAGSLAALLATPEVLEAAAVLALLGGTVLWAVNFATGAV
GTLLKGQEDEEYEDDELD*
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