prot_P-littoralis_Contig68.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig68.30.1
Unique Nameprot_P-littoralis_Contig68.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length327
Homology
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: D7FY66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY66_ECTSI)

HSP 1 Score: 547 bits (1410), Expect = 8.200e-194
Identity = 281/312 (90.06%), Postives = 294/312 (94.23%), Query Frame = 0
Query:    1 MSQASSAPGVDP--RHDGGEEGVGKEGQGEEDDSDEVIFSCRLDNAKSITTILSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVSWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQDID 310
            MSQ SSAPGVD   RH     G G+ G+ E+++SDEVIFSCRLDNAKSITTILSCLSHG+RKDQQAQCEVTK+SMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARA FRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRS EVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGS G SE+DFPK+SEAFVCFEC++ RVSWTYLMTGMETGMRAL HANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQ++D
Sbjct:   80 MSQESSAPGVDDPARH----HGPGQRGEEEDEESDEVIFSCRLDNAKSITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARATFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSNGSSEIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQEMD 387          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: A0A6H5JRH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH0_9PHAE)

HSP 1 Score: 457 bits (1176), Expect = 3.730e-160
Identity = 241/291 (82.82%), Postives = 257/291 (88.32%), Query Frame = 0
Query:    1 MSQASSAPGVDP---RHDGGEEGVGKEGQGEEDDSDEVIFSCRLDNAKSITTILSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVSWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQI 288
            MSQ SSA  VD     HD G+ GV      E+++SDEVIFSCRLDNA+SITTILSCLSHG+RKDQQAQCEVTK+SMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFG GSLAQTSVSMAYQEARA FRLTLE GGVFTSCEIRTIHQDEEAM+FSTLAKAFGRS EVCRCILK E    AFQELADLNGATSVSVTFGQEA HLQL AKGS G SE+DFPK+S++ VCFEC++  VSW +LMTGMETGMRAL HANETYFRVNEEGILCIQHQ+
Sbjct:    1 MSQESSASRVDDPARHHDPGQGGVE-----EDEESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGRGSLAQTSVSMAYQEARATFRLTLEGGGVFTSCEIRTIHQDEEAMKFSTLAKAFGRSKEVCRCILKGE----AFQELADLNGATSVSVTFGQEATHLQLYAKGSNGSSEIDFPKSSQSLVCFECTARGVSWAFLMTGMETGMRALGHANETYFRVNEEGILCIQHQV 282          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: A0A835YYW5_9STRA (Repair protein Rad1/Rec1/Rad17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW5_9STRA)

HSP 1 Score: 328 bits (842), Expect = 1.810e-108
Identity = 160/288 (55.56%), Postives = 213/288 (73.96%), Query Frame = 0
Query:   26 QGEEDDSDEVIFSCRLDNAKSITTILSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE-GAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVSWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQDIDMD 312
            + E +  ++ +FSCR+DNA+++TT+LSCLSHGSRK Q AQCE T + +T V++G+AK+TQAQG+L   LFQ Y+C E G +FGINL+ LLECLQIFG    A  S ++AY    A F++TLEE GVFTSCE+RT+ ++ +AMEF+ LA AF  S E CRCI++SE LKEAFQELADL GA S+     Q APHL+LS  GS G S + FP++SEAFV F C+ P + W+Y ++ +E GMRALP A ET+ R+NEEGI+CIQHQ+ ++ G  ++VD L+C +  DID D
Sbjct:   25 EAEREAEEKDLFSCRIDNARAVTTVLSCLSHGSRKAQHAQCEATPEGLTFVITGKAKFTQAQGALSKDLFQAYECEEDGGRFGINLSMLLECLQIFGMN--ASASAALAYYPGTATFKVTLEENGVFTSCELRTLVEESDAMEFAALAAAFRSSPEECRCIIRSETLKEAFQELADLPGAASIVFEASQHAPHLKLSTSGSYGSSSIQFPRSSEAFVHFSCTPPSLRWSYALSALEGGMRALPFAQETFVRINEEGIMCIQHQVQVA-GHNTYVDFLICANTADIDDD 309          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: A0A6H5JQZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQZ4_9PHAE)

HSP 1 Score: 320 bits (819), Expect = 2.580e-106
Identity = 183/249 (73.49%), Postives = 196/249 (78.71%), Query Frame = 0
Query:    1 MSQASSAPGVDP---RHDGGEEGVGKEGQGEEDDSDEVIFSCRLDNAKSITTILSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECS 246
            MSQ SSA  VD     HD G+ GV      E+++SDEVIFSCRLDNA+SITTILSCLSHG+RKDQQAQCEVTK+SMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQE+     +    G      E++  +   EAMEFSTLAKAFGRS EVCRCILKSEILKEAFQELADLNGATSVSVTFGQEA HLQLSAKGS G      P +S       CS
Sbjct:    1 MSQESSASRVDDPARHHDPGQGGVE-----EDEESDEVIFSCRLDNAESITTILSCLSHGTRKDQQAQCEVTKESMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQESD----VPPHPGRGRGVHELQDKNHPPEAMEFSTLAKAFGRSKEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEATHLQLSAKGSNGSRYAMAPPSSHGAPGSRCS 240          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: A0A4D9CMN7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMN7_9STRA)

HSP 1 Score: 263 bits (671), Expect = 3.560e-83
Identity = 136/276 (49.28%), Postives = 185/276 (67.03%), Query Frame = 0
Query:   28 EEDDSDEVIFSCRLDNAKSITTILSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDCV-EGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVSWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIPMSMG-QTSFVDVL 301
            E+   +E +FSCR+D+ K IT  L+CLS GSRKDQ AQ EV  + +  +V+GRAK+TQ+QG+ + +LFQ + C  EG  F I+L  LLECLQ+FG  SL  T ++M+Y+  +A  RLTLEE GV T+CE+R +   E+A + + LA AF    EV R ILKS++LKEA  EL+DL GA SV V+     P+  L+  G  G  E+  PK+SEAFV F+CS  R SW+Y +  +  GMRAL  A ETY R+NEEGI+C+QHQ+  +   Q++F+D L
Sbjct:    9 EQKTDEEPLFSCRIDSTKIITATLACLSDGSRKDQLAQVEVNNEGIVFIVTGRAKFTQSQGTFNRALFQAFQCQPEGGSFTIDLHLLLECLQVFGAASLTNTMLTMSYEPRKAALRLTLEEQGVLTTCEVRALEAGEDAFDLAALASAFRSRPEVLRAILKSDVLKEAISELSDLPGAGSVRVSVAPHEPNFHLATNGICGGLEIFLPKSSEAFVHFDCSEAR-SWSYGLGALNQGMRALTVAKETYVRINEEGIMCVQHQVENTASRQSTFIDFL 283          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: A0A7S2WVI5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVI5_9STRA)

HSP 1 Score: 245 bits (625), Expect = 3.600e-76
Identity = 132/292 (45.21%), Postives = 186/292 (63.70%), Query Frame = 0
Query:   22 GKEGQGEEDDSDEVIFSCRLDNAKSITTILSCLSHGS-RKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIH---QDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVSWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCP-DIQD 308
            G EG  + D     +FSCRL++AK +  ++SCL+H   RK+  A C+V    +   ++ RAK  Q  G+L   +F  ++C E   F +NL  +L+CL +FGP +++ T+++M Y +  A+F+LT+EE GVFT C+I+T+    QDE+  EFS L  +F R  E C+ ILKSE LKEA  EL DL+GA+ V V     APH QL+A G++G  E++FPK+SE FV F CS   + +TY +  +  GMRAL  A ET  R+N  GI+CIQHQ+    G TSFVD L+CP D+QD
Sbjct:    5 GGEGYADADHGGATLFSCRLESAKELHALVSCLAHEKKRKEHIALCQVNDQGLNFSMNQRAKTIQVSGTLPRRVFSSFECHEHGAFCLNLGMVLDCLSLFGPAAISSTAIAMTYSKEDAVFQLTMEEHGVFTRCDIQTLDGSAQDED--EFSQLTSSFRRDPEACKLILKSEFLKEALYELQDLSGASFVDVFISPTAPHFQLAATGNLGTLEIEFPKSSELFVLFSCSEA-LRFTYRLEALIRGMRALLVAAETCVRINVVGIMCIQHQVQNHSGVTSFVDFLMCPADLQD 293          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: A0A7S2G8B6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8B6_9STRA)

HSP 1 Score: 212 bits (540), Expect = 8.000e-64
Identity = 110/270 (40.74%), Postives = 164/270 (60.74%), Query Frame = 0
Query:   47 ITTILSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDCVE-GAKFGINLTTLLECLQIFGPGSLAQTS--VSMAYQEARALFRLTLEEGGVFTSCEIRTIHQD---EEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVSWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDIQDID 310
            I ++L C+ +G+RKDQ AQC+V    ++  +  R++ TQ  G++D + F E++C + G  F IN+ TLL+CL IFGP      S  V+M++ +      L L+E GVFT C+I+ I  D   E    F+  +  F +    C+CI+KSE LKEA  EL DLN AT +SV    +APH Q+SA+GS+GF +++FP++S+ F  FEC+   +   Y       GMRAL  + E+YFR+NE G+LCIQH +    G   F+D ++ P+I D +
Sbjct:    1 IQSMLQCIVNGTRKDQHAQCQVHAGGISFSLQSRSRTTQVTGTMDKNCFTEFECYDDGGTFCINICTLLDCLSIFGPQQAGTNSTVVTMSFDKNLCQLILNLDEDGVFTRCDIQAIENDGDEEVGARFAQFSDEFRQKPSPCKCIVKSEQLKEALNELRDLNNATRLSVLLSPQAPHFQISAQGSLGFLDIEFPRSSDLFELFECTET-MKTEYDYDSFVQGMRALTVSEESYFRINEGGLLCIQHHVETHGGGRCFIDFIMLPNIADCE 269          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: A0A7S0XDK7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDK7_9STRA)

HSP 1 Score: 169 bits (427), Expect = 2.280e-47
Identity = 88/222 (39.64%), Postives = 137/222 (61.71%), Query Frame = 0
Query:   88 GSLDSSLFQ---EYDCVEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVSWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPDI 306
            G  D  +F+   E+D  E  +  INLTT ++CL +FG  SL  T+ ++ Y    AL +L+LE+ G+ T+C+I T++ D        L  AF  S+E+C+ ILKSEILKEA  +L+D+ GAT+V++   +   +L     G++G  E++FP+ S+ FV F C      WTY +T ++ GM+AL  + ET+ R+NEEG++CIQHQI  + G   ++D L+  D+
Sbjct:    5 GYFDDYIFKPINEHDNDERIRIFINLTTFVDCLLLFG-SSLETTAGTITYNSDDALLKLSLEDSGILTTCDISTLYMDNNEDIGYELFSAFLSSNELCQVILKSEILKEAMHDLSDVYGATTVAIEITKNPENLTFMTVGTMGECEIEFPRLSDLFVSFRCDKSS-KWTYPLTSLQLGMKALNISKETFIRMNEEGVICIQHQIETNRGHEIYIDYLMVSDV 224          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: A0A8K1C6J7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6J7_PYTOL)

HSP 1 Score: 152 bits (383), Expect = 1.180e-39
Identity = 95/307 (30.94%), Postives = 155/307 (50.49%), Query Frame = 0
Query:   30 DDSDEVIFSCRLDNAKSITTILSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQ--EYDCVEGAK----------------FGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELADLNGATSVSVTF-----GQEAPH--LQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVS------WTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 305
            D  ++ +  C  ++ K + T+LSCL  G +KDQ+ +C++    M      + K  Q + SL S LF   E+   E ++                F +NL+ L+E L +FGP SL  +S+ ++Y    A   L +E+ GV   C ++ +  +   +       AF +S  + RCI++SE L +AF EL DL  A SV++       G  + H  L LSA    G  E++F ++S AF+ F C++   S       T+ +  ++   +AL H+NET+ R+N +G L +QH I    G  +FVD L+ P+
Sbjct:   39 DQREKPVLVCTSESVKLLVTLLSCLFQG-KKDQRIRCDIDSAGMLFTSHSKGKSLQIKTSLGSELFDTFEFRASETSQLDHDDEDDSQLDTQYSFALNLSALIESLSMFGPASLPTSSLRLSYFAESARLTLLVEDNGVICECAMQVLELESNDIAQLEFESAFEQSAVIGRCIMQSEPLHDAFAELYDLPSAASVAIAMYEDDEGPASSHKCLSLSATSETGSCEIEFARSSSAFIEFFCTNDETSDDGSASATFHVAVLQQAFKALGHSNETFLRMNADGFLSVQHMIESGSGDKAFVDALISPE 344          
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Match: F0XY36_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY36_AURAN)

HSP 1 Score: 157 bits (397), Expect = 3.960e-39
Identity = 97/290 (33.45%), Postives = 147/290 (50.69%), Query Frame = 0
Query:   37 FSCRLDNAKSITTILSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDCV-------------EGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGVFTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEA---FQELADLNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRVSWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIP--MSMGQTSFVDVLLCPDIQD 308
            FS RLD+A  +T+++ CL    R +  A   +    + L V GR+K T A  +L  S F  +DCV             E   F +++  L+ECL++FG    A   VS++Y  A  +F+LTLEE G FTSC++  +    +    + +A AF  +    + +  S  L++    F E A  +    VSV       H +L+A GS+G  ++D P+  +AFV FE      SWTY       GM+ALPH++ETY RVN+ G+L +QH +      G   +++ L C D  D
Sbjct:    4 FSARLDSAALVTSLIECLIEEKRSEVVAHIAIDAAGLELHVVGRSKSTHATLTLPVSCFAAFDCVDETGAPFVRGGDQEPIAFSVDVRALVECLKLFGAAG-ADLEVSLSYAPATEVFKLTLEEPGAFTSCDVHVLEDSNDLEGATDMAGAFRDAPTAAKTLATSATLRDVVADFDESAVGSSTIKVSV-------HFRLAASGSVGCVQIDVPR--DAFVVFEAPEETRSWTYQTQAFLHGMKALPHSHETYVRVNDHGMLLVQHMVANDRGAGDNMYLEYLCCSDTDD 283          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig68.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FY66_ECTSI8.200e-19490.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRH0_9PHAE3.730e-16082.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYW5_9STRA1.810e-10855.56Repair protein Rad1/Rec1/Rad17-domain-containing p... [more]
A0A6H5JQZ4_9PHAE2.580e-10673.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CMN7_9STRA3.560e-8349.28Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2WVI5_9STRA3.600e-7645.21Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2G8B6_9STRA8.000e-6440.74Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0XDK7_9STRA2.280e-4739.64Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A8K1C6J7_PYTOL1.180e-3930.94Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0XY36_AURAN3.960e-3933.45Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003011Cell cycle checkpoint protein, Rad1PRINTSPR01246RAD1REPAIRcoord: 65..78
score: 27.14
coord: 104..120
score: 57.65
coord: 285..298
score: 40.0
coord: 233..246
score: 32.86
IPR003021Rad1/Rec1/Rad17PRINTSPR01245RAD1REC1coord: 39..56
score: 23.81
coord: 149..169
score: 26.53
coord: 292..307
score: 36.61
coord: 130..147
score: 33.33
coord: 271..288
score: 28.57
IPR003021Rad1/Rec1/Rad17PFAMPF02144Rad1coord: 36..286
e-value: 3.9E-41
score: 140.9
IPR003021Rad1/Rec1/Rad17PANTHERPTHR10870CELL CYCLE CHECKPOINT PROTEIN RAD1coord: 30..312
NoneNo IPR availableGENE3D3.70.10.10coord: 33..305
e-value: 5.0E-68
score: 230.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 182..303
NoneNo IPR availableSUPERFAMILY55979DNA clampcoord: 63..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig68contigP-littoralis_Contig68:137619..157544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig68.30.1mRNA_P-littoralis_Contig68.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig68 137024..158517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig68.30.1 ID=prot_P-littoralis_Contig68.30.1|Name=mRNA_P-littoralis_Contig68.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=327bp
MSQASSAPGVDPRHDGGEEGVGKEGQGEEDDSDEVIFSCRLDNAKSITTI
LSCLSHGSRKDQQAQCEVTKDSMTLVVSGRAKYTQAQGSLDSSLFQEYDC
VEGAKFGINLTTLLECLQIFGPGSLAQTSVSMAYQEARALFRLTLEEGGV
FTSCEIRTIHQDEEAMEFSTLAKAFGRSDEVCRCILKSEILKEAFQELAD
LNGATSVSVTFGQEAPHLQLSAKGSIGFSEVDFPKTSEAFVCFECSSPRV
SWTYLMTGMETGMRALPHANETYFRVNEEGILCIQHQIPMSMGQTSFVDV
LLCPDIQDIDMDEEQEEQQGGVRMQE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003011Cell_cycle_checkpoint_Rad1
IPR003021Rad1_Rec1_Rad17