|
|
Homology
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: D7G4W6_ECTSI (Acireductone dioxygenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4W6_ECTSI) HSP 1 Score: 317 bits (811), Expect = 1.590e-102 Identity = 145/181 (80.11%), Postives = 159/181 (87.85%), Query Frame = 1
Query: 253 AIEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSLVHGEA 795
AIEAWYMD D ADQRLPHRQ+PN C AEL+SLGVLHW+LDAD+H DPAL++IR DRGYSYQDIITVSPD+L YE KI+SFF+EHMHSDEEIRY+LEG GYFDVRAKDERWVRIKM+KGDMITLPAGIYHRFTLDD+NYIKAMRLFVGEPVWTPLNRPQDDHP R+ YL + A
Sbjct: 2 AIEAWYMDEDKAADQRLPHRQSPNVACGTAELQSLGVLHWELDADKHADDPALEKIRQDRGYSYQDIITVSPDKLANYEDKIKSFFEEHMHSDEEIRYILEGSGYFDVRAKDERWVRIKMSKGDMITLPAGIYHRFTLDDTNYIKAMRLFVGEPVWTPLNRPQDDHPVRKDYLANFATAAA 182
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: A0A836CI35_9STRA (Acireductone dioxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI35_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.500e-82 Identity = 120/176 (68.18%), Postives = 140/176 (79.55%), Query Frame = 1
Query: 256 IEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSLV 783
+EAWYMD D DQR PHR+ PN C+ L+SLGVLHW LDAD HE+DPAL IR++RGY+Y DIITVS D L YE KIRSF++EHMH+DEEIRY+L+G GYFDVR +RW+R+ M KGDMI LPAGIYHRFTLD +NY KAMRLFVG PVWTP NRPQD HP RR Y+++ V
Sbjct: 3 LEAWYMDDDTETDQREPHRKVPNEPCSFETLDSLGVLHWHLDADNHETDPALAAIRAERGYTYSDIITVSADTLPNYEAKIRSFYEEHMHTDEEIRYLLDGTGYFDVRDARDRWIRVAMGKGDMIVLPAGIYHRFTLDANNYTKAMRLFVGAPVWTPHNRPQDAHPVRRQYVEAFV 178
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: A0A7S2UW46_9STRA (Acireductone dioxygenase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UW46_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.660e-82 Identity = 121/173 (69.94%), Postives = 142/173 (82.08%), Query Frame = 1
Query: 253 AIEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYL 771
AIEAWYMD D +ADQRLPHR+ PN + +LE LGVL W L+AD +E+DP L IR RGYSYQD+IT SPD+L YE+KI+SF++EH+H+DEEIRY LEG GYFDVR D++W+RIK+ KGDMITLP GIYHRFTLD+ NYIKAMRLFVGEPVWTP NRPQDD +RR YL
Sbjct: 2 AIEAWYMDEDTSADQRLPHRKEPNESVSLEQLEKLGVLTWSLNADAYETDPELQAIRDQRGYSYQDLITCSPDKLACYEEKIKSFYEEHIHTDEEIRYCLEGSGYFDVRDFDDKWIRIKLVKGDMITLPEGIYHRFTLDEGNYIKAMRLFVGEPVWTPYNRPQDDSASRRNYL 174
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: A0A2R6WWN5_MARPO (Acireductone dioxygenase n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WWN5_MARPO) HSP 1 Score: 259 bits (661), Expect = 6.730e-80 Identity = 117/183 (63.93%), Postives = 144/183 (78.69%), Query Frame = 1
Query: 247 SAAIEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSLVHGEA 795
S+ +EAWYMD D T DQRLPHR PN +A +L LGVL W LDAD+ E+DP L++IR +R Y+YQDII VSP L YE+KI+SF++EH+H+DEEIRY ++G GYFDVR +RW+RI KGDMI LPAG+YHRFTLD+SNYIKAMRLF+GEPVWTP NRPQDDHP RR Y+++ + A
Sbjct: 11 SSGVEAWYMD-DSTEDQRLPHRLVPNKPVSARDLADLGVLQWHLDADKFENDPELEKIRKERNYTYQDIINVSPTSLPEYERKIKSFYEEHIHTDEEIRYCIDGSGYFDVRDSADRWIRIWTKKGDMIVLPAGLYHRFTLDESNYIKAMRLFIGEPVWTPYNRPQDDHPIRRDYINNFLKSHA 192
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: A9NPM8_PICSI (Acireductone dioxygenase n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NPM8_PICSI) HSP 1 Score: 249 bits (635), Expect = 3.210e-76 Identity = 112/175 (64.00%), Postives = 140/175 (80.00%), Query Frame = 1
Query: 256 IEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSL 780
+EAWYM+ D DQRLPH P + + +L LGVL+W LDAD++E+DP L QIR +RGY+Y D+IT SPD+L YE K++SFF+EH+H+DEEIR+ LEG GYFDVR D++W+R+ + KGDMI LPAGIYHRFTLD SNYIKAMRLFVGEPVWTP NRPQDD+P R+ Y+D+
Sbjct: 1 MEAWYMNETDE-DQRLPHHCEPRQDISLEKLSDLGVLYWHLDADKYETDPDLQQIRENRGYTYTDMITCSPDKLPNYEDKLKSFFEEHIHTDEEIRFCLEGSGYFDVRDGDDKWIRVWLKKGDMIVLPAGIYHRFTLDTSNYIKAMRLFVGEPVWTPYNRPQDDNPIRKEYIDNF 174
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: D8R5H6_SELML (Acireductone dioxygenase n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R5H6_SELML) HSP 1 Score: 248 bits (634), Expect = 3.450e-76 Identity = 116/172 (67.44%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 256 IEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYL 771
+EAWYMD D + DQR PH P + +L +LGVLHW LDADR+E+D L +IR RGYSYQDIITVSP++L YE+KIRSFF+EH+H DEEIRY L+G GYFDVR +RW+RI + KGDMI LPAG YHRFTLD+SNYIKAMRLFVGEPVWTP NRPQD+HP R+ Y+
Sbjct: 1 MEAWYMD-DSSEDQRQPHHLNPVQLVSHEKLAALGVLHWNLDADRYETDSKLQEIRKKRGYSYQDIITVSPEKLPNYEQKIRSFFEEHIHLDEEIRYCLDGSGYFDVRDLGDRWIRIWVKKGDMIVLPAGSYHRFTLDNSNYIKAMRLFVGEPVWTPYNRPQDEHPVRKQYI 171
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: UPI0018649841 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase n=1 Tax=Megalops cyprinoides TaxID=118141 RepID=UPI0018649841) HSP 1 Score: 248 bits (633), Expect = 4.700e-76 Identity = 111/176 (63.07%), Postives = 137/176 (77.84%), Query Frame = 1
Query: 256 IEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSLV 783
+EAWYMD D DQRLPH+ PN EL+ +GV HWKL+AD HE+DP L +IR +RGYSY DIIT+ PD+L YE+K++ FF+EH+H D+EIRY+LEG YFDVR KD++W+RI M+KGDMITLPAGIYHRFTLD +NY KAMRLFVGEPVW NRP +D R+ Y++SL
Sbjct: 1 MEAWYMD-DSNEDQRLPHKLDPNVPVTLEELQKIGVFHWKLNADIHETDPELQKIREERGYSYMDIITIHPDKLPSYEEKLKMFFEEHLHLDDEIRYILEGRAYFDVRDKDDKWIRIAMSKGDMITLPAGIYHRFTLDQTNYTKAMRLFVGEPVWKAYNRPAEDFEIRQKYVNSLA 175
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: A0A150GU06_GONPE (Acireductone dioxygenase n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GU06_GONPE) HSP 1 Score: 248 bits (633), Expect = 1.240e-75 Identity = 114/182 (62.64%), Postives = 139/182 (76.37%), Query Frame = 1
Query: 250 AAIEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSLVHGEA 795
A+IEAWYMD+ T DQRLPHR PN C+ A+L LGVL+WKLDAD++E DP L IR YSY +I+ +SP L GYE KI+ F++EH+HSD+EIRYVL+G GYFDVR ++RW+RI KGD+I LP GIYHRFTL+ +NY KAMRLFVG PVWTP NRPQ++HP+RR YLD G A
Sbjct: 21 ASIEAWYMDSS-TEDQRLPHRLEPNQPCSLAKLRELGVLYWKLDADKYEDDPRLAAIRKVYNYSYTEIVNISPTTLPGYEDKIKMFYEEHIHSDDEIRYVLDGSGYFDVRDFEDRWIRIDCQKGDLIVLPEGIYHRFTLNTNNYTKAMRLFVGAPVWTPHNRPQEEHPSRRKYLDKFATGVA 201
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: A0A0U9HMK5_KLENI (Acireductone dioxygenase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HMK5_KLENI) HSP 1 Score: 248 bits (634), Expect = 1.320e-75 Identity = 118/210 (56.19%), Postives = 149/210 (70.95%), Query Frame = 1
Query: 232 MSVSSSAAIEAWYMDADDTADQRLPHRQTPNAEC-------------------------NAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSLVH 786
M+ +++ EAWYMD D ADQRL H+ PN + +L LGV+HW LDAD++E+DP L QIR DR YSYQD+ITVSPD+L YE KI+SFF+EH+H+DEEIRY L+G GYFDVR +++W+RI + KGDMI LPAG+YHRFTLD++NYIKA+RLFVGEPVWTP+NRP DDHP R+ Y+D+ VH
Sbjct: 1 MAAANAVRPEAWYMD-DSDADQRLLHKLEPNQPXXXXXXXXXXXXXXXXXXXXXXXXXVSREQLAELGVVHWVLDADKYETDPELQQIRKDRNYSYQDLITVSPDKLPNYEVKIKSFFEEHIHTDEEIRYCLDGSGYFDVRDANDKWIRILVRKGDMIVLPAGMYHRFTLDENNYIKALRLFVGEPVWTPINRPVDDHPIRKSYVDAFVH 209
BLAST of mRNA_P-littoralis_Contig679.11.1 vs. uniprot
Match: A0A7S1UGK2_9STRA (Acireductone dioxygenase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGK2_9STRA) HSP 1 Score: 249 bits (637), Expect = 2.000e-75 Identity = 111/178 (62.36%), Postives = 143/178 (80.34%), Query Frame = 1
Query: 256 IEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLDADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSDEEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNYIKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSLVHG 789
IEAWY + DD ADQRLPH+ PN +L LGV+ W LDAD++E D L+ IR +RGYSY+D+ITVSP++L GYE+KI+SFF+EH+H+DEEIRYVL+G GYFDVR +++ W+RI KGDMI LP G+YHRFT+D+ NYIKAMRLFVGEPVWTP NRPQ+D+P+R Y+++ + G
Sbjct: 51 IEAWYYN-DDGADQRLPHKYEPNRPVPLEKLTELGVIQWALDADKYEDDAELEAIREERGYSYKDVITVSPEKLPGYEEKIKSFFEEHIHTDEEIRYVLDGTGYFDVRDENDEWIRIFCGKGDMIVLPEGMYHRFTMDEQNYIKAMRLFVGEPVWTPYNRPQEDNPSRTKYVNAFLSG 227
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7G4W6 |
| Preferred name | ADI1 |
| PFAMs | ARD |
| Model size | 1753 |
| Max annot lvl | 2759|Eukaryota |
| KEGG rclass | RC01866,RC02018,RC02118 |
| KEGG ko | ko:K08967,ko:K09419 |
| KEGG Reaction | R07363,R07364 |
| KEGG Pathway | ko00270,ko01100,map00270,map01100 |
| KEGG Module | M00034 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000096,GO:0000097,GO:0001871,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0010297,GO:0010309,GO:0016020,GO:0016053,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0019509,GO:0019752,GO:0030246,GO:0030247,GO:0043094,GO:0043102,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048518,GO:0050789,GO:0050794,GO:0051213,GO:0051302,GO:0055114,GO:0065007,GO:0071265,GO:0071267,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:2000241,GO:2000243 |
| Exons | 5 |
| Evalue | 3.29e-109 |
| EggNOG OGs | COG1791@1|root,KOG2107@2759|Eukaryota |
| Ec32 ortholog description | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase |
| Ec32 ortholog | Ec-20_000070.1 |
| EC | 1.13.11.53,1.13.11.54 |
| Description | acireductone dioxygenase [iron(II)-requiring] activity |
| Cds size | 567 |
| COG category | IQ |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko03000 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791409.9107833-UTR-P-littoralis_Contig679:100057..101012 | 1680791409.9107833-UTR-P-littoralis_Contig679:100057..101012 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig679 100058..101012 - |
| 1680791409.9936354-UTR-P-littoralis_Contig679:110872..111103 | 1680791409.9936354-UTR-P-littoralis_Contig679:110872..111103 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig679 110873..111103 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680791409.9280798-CDS-P-littoralis_Contig679:101012..101123 | 1680791409.9280798-CDS-P-littoralis_Contig679:101012..101123 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig679 101013..101123 - |
| 1680791409.940796-CDS-P-littoralis_Contig679:104975..105102 | 1680791409.940796-CDS-P-littoralis_Contig679:104975..105102 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig679 104976..105102 - |
| 1680791409.9548717-CDS-P-littoralis_Contig679:106121..106234 | 1680791409.9548717-CDS-P-littoralis_Contig679:106121..106234 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig679 106122..106234 - |
| 1680791409.9675167-CDS-P-littoralis_Contig679:107722..107811 | 1680791409.9675167-CDS-P-littoralis_Contig679:107722..107811 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig679 107723..107811 - |
| 1680791409.9805913-CDS-P-littoralis_Contig679:110745..110872 | 1680791409.9805913-CDS-P-littoralis_Contig679:110745..110872 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig679 110746..110872 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig679.11.1 >prot_P-littoralis_Contig679.11.1 ID=prot_P-littoralis_Contig679.11.1|Name=mRNA_P-littoralis_Contig679.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=189bp
MSVSSSAAIEAWYMDADDTADQRLPHRQTPNAECNAAELESLGVLHWKLD ADRHESDPALDQIRSDRGYSYQDIITVSPDRLEGYEKKIRSFFDEHMHSD EEIRYVLEGVGYFDVRAKDERWVRIKMAKGDMITLPAGIYHRFTLDDSNY IKAMRLFVGEPVWTPLNRPQDDHPARRGYLDSLVHGEA* back to topmRNA from alignment at P-littoralis_Contig679:100058..111103- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig679.11.1 ID=mRNA_P-littoralis_Contig679.11.1|Name=mRNA_P-littoralis_Contig679.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11046bp|location=Sequence derived from alignment at P-littoralis_Contig679:100058..111103- (Pylaiella littoralis U1_48) GGCGGAAAGAGTGTAGAGTACCCAGGCTGACGGGACTGTCATCTCATGTT
AGGAGATGCCTCCTTCCCTTACTGTTTGGTAATCTCCTCTTTCCTCCCCG
TCACTGCCAGCTGCTGCCGTCTGCCTGCCTGACCGCCGACCCACCAACTG
ACTGGCTTGCACTTGTTGATCTCCGGTCCGAGTAAACCACACCACCACAC
CAAGACCAGCTGGAGTTGCTGCCTGAAAAGCATGTCCGTTTCATCCTCCG
CGGCGATTGAGGCATGGTACATGGATGCAGATGACACCGCTGACCAGAGG
CTACCTCACCGACAGACCCCGAACGCCGAGTGCAACGCTGCGGAGCTGGA
GTCCCTAGGTCGGAGAGTTACATTAGGGAGAAAGAGAGAGAGAGAGAGAG
AGAGAGAGAGGAACGAAACAGCTGCTGTGGAAGTACAACAACACTCCATG
CATGTGCAAATACTGAAGTACTTGTAAGTGATATACATACGCGTATCCCA
AATCCCAAGCATCATGAAGAAATACCCCGGAGTAACAGCAGTGGTTGTTG
CCCCGGTTGAAGAAAACGGAGAACGCTGCTTGTATATTCTACAGCCGGCA
TCACGGAAGTTGCTGGTGCAGGCGGGGTGGCTGGCGTGCAACATGGCACT
CGAGGCCTCAGACGTGACGATTTGTTGAGGCGCCGGAGGGTACAGTAGCG
AAATCTGCAAGATAGATGTCCGCAATCAGCAAACTGTTGTCGTGTTCATG
TCTCTTGGTCCAGGGCGTAACTCGGCCAGAACGGACGTCGAAAGGCTGTG
TGACGGAGAACTTAGCACGTCGGTTCACGCGTGCAAGCTCTGGCATCGAA
GTTCACAACGAAAGTTCACAAAAGCAGTTCACACCAGCCAGGCAGGATGC
CAAGCGGGATCTATCCATATGATTCGAATATCCATCAACTCGAGATCCCC
TGATGAAGCCGATTATCCACTTCTCCGATACTGACTGTAGTTCATTTCCT
ACAACACTGCTGGATCATGAAAATATAATTTCCTTCACTACAAATGCAAG
TTGCCTGCCGCAGAGTCATCGGACTGACCATAAAACGTCCCGTCCCCTAC
AGCAGTAAATATAAACGGTATTCAAGCCATCCCCTGTCCGTGAGCGACTC
AATCCGCCCAGTCTGCCACTCTTTTTTTTTCTTGGCCCAAAAAACAAGAC
AAAAAACTCCTGTGTTGACTTCCCCCTGTGTGACCCCAGTTGGAGCGTCG
ACCTACTACCCGAAAGGTGCAGAGTGGCGTCCAATTAAAGGGAATACAAC
ACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACAACACCCGCTCTATCTTTGCAT
ACAGTAGCTGGTAATCGCCCCGTTCTATACGGTATCTGCTGCTCAGGTAT
TCTGCTGTATGGGTATACGTTTGCCCCTCTGTGTTCCCTTTCGTGGCCCA
GCTTGGGGAGAAAGCGGCCCACTAATCAGAAACGCCTATTTTGAGCGACG
CCCGAAACCTCATCTTGTCCCACCACGAAGCACAGGCTGTTTCTCAGCCA
ATATGCAGGATTAAGTGTGGCGCCTGCCGCTGAGCCCCATTTCTTAGGCC
GGTTTTCTTATTTCTTTGAGAATCTGGGGCTGCATTTCTTATGAACATGT
TTCTTATGATGTGGGCCGGTACTCTGTATCATGATCGCGATTTTATTGAA
CATTTTACTCATGAGACTCATCTTCCCTTATTAGCCCTGCCGTACACGAG
CTGCTGTGACGACGACTGCTGTAGAACGATGAGGTCTTGTGCATCTCCAT
CCGATCTTGTTTGGTGCCCATCTCAGAGACCAGCTCTGAAACGAAGTAGG
AATGACGAACCCGCCCTGAAACCAACATGAATGACAGACGCTTACGAAGC
CAGCATTAAACAATCTCCCATTTACTGAGCCCTTTTCGTTTCATGTCCCT
GTCTGATGCTTAAACCCTTGTACACAAGAAGTGTACATAGACTTGATCAC
CAAGTCAAAGAACGTGAGCCAGGTTGCACCATGCAGGCAGTAGAAAAAAT
GCCATTATCACATACCTCGAAGTATATGACACCTGTATCAAGTTTGCCCG
GTACAGTAGTCGTGAAGCTTGCGAAAAAGCACCGTAAGTTATGACAAGAG
TCTATTTTTTATTGCTTTTTTTTTTTTTTGAGTCATTGTAAATCTGCCAA
CGGTGGCAGGGTTCTTCTCGCTGACAACGTTGGCAGATTTTATAATCGCT
GCCAACGTCGGCAGGTTTTATTATCCTGCCAACTGTTTGCCATCAATTTC
GACGCCATCGCCCTGATCTCATGACACGAGCATCCGGTGGCCAAAGTAGA
GGGTGGGGCGGTTTGCGACGGCTGCCCTACTGGGAGCTTTTAATCGTCGA
CCAAAACAAAGGGAAAAAAAACGTGCAACGCGGCCTTTTTTTTTTGCTTG
GTCGACGATAAGAAGCTCCCAGTAGGGCAGCTCAAGGCCGCAGCCAAGCG
TCTCAACTTCTACTTTGACCACCGGATGCTCGTGTCACGAGATGAGGACG
GTGGCGTCGAAATTGATGACATGGCACAATCGTTAAATCTGCCATCGTTG
GCAGCAAGAAAAAACTGCCCACGTTGGCAGATTTATCAAAAGTCGTTTAG
TTTTTTACCAGAGACCCATCCGTATCAACCGTATCAACGTGGGGTTCTTC
TTCGGCACAAAGACAGGCGCTACACAGCAGTAGTTAGCGCCTGGCCTCCT
CGGCGTGCTGATTTTTCTTGTTGGGATTCTTGTGGACATCGGAGAGGGAA
GACAAGACAAGTTGCGTACGAAATATGTCAAAAGAAGTACGGAGTACTTC
GTACCGTTTTTTGATACTATCGTCGAGATCTGTTTTTACGGTTACCTGTC
GGCATCAACACACACACACACACCTATCCTGCCTTCCTTCCTTGCGTATG
CTTCACGACAGAAAATCGCTTGAAAAATAGGCGTTCATGACAACCATCCA
GGGGTGACGGGGGAGGAAAGAGTCGGGGGGGCGGGAGGGGGGCTAGCACG
GTGCTTTTGGGGTGTTCGGGTCAACCTCTGTTTGCCAATGTGCGCCTTCG
GGTGTTTATATACACGTGCCTGCACGTATGCAACATGCGCAGGCGTTCTC
CACTGGAAACTGGATGCAGACAGGCACGAGAGCGACCCTGCGCTGGACCA
GATCAGAAGCGACCGCGGTTACTCGTACCAGGTGCGCCCTCCAAGCGACG
CGCGGTAGTGACATCCTCTGTGAACGCCACGCCCGGGGGGGGGAAAGCAT
AAAGTCAAGCGAAAAATAAATCAAGCAAAAACAAAAATGCCAGGCCGAAT
ACAGAGAAAGGTACAAGGGCGGTCTTAAGTGTAAAGCGGAGCTCAGGAAG
GGGCCCCGGGATGAAGGACGATAGTGTTTCGGGTGTATGATACCGGCCGA
ACTAAAAAAGGGGGCACGGGCGTTCGATTCTGAGGCGGGGGTACACACTC
GGGGGATGTTTCGGTGGTGTGCTGCGTTGCTGCTGGTGCCACAGGTACTG
TTGCTGCCTGGAGTGTACGCTGCTGGGACTGCCCCCATGATGGTATTATT
TACTGGAAAGTGTGTTGAGTTGTTCCTCCCTCTCCCCTTTGGACCGTTTT
TGGTTATTATTATTGTTGAGTTGTCCCCCCCCCCCCCTCCCCTTTGGACC
GTTTTTGATTATTAATATGTTGAGTTGTCGCCCCCACCCCTGTTTGGACC
ATTTATTTATAATTATTATTATTATTATTATTATTTTGTCGAGTACCCCC
CCTGTTTGGACCGTTTTTTTATTTGCATTGTTGAGTTGTCCCCCTCCCCC
CTTTGGACTGTTTTTTGTTACTCCGAAGTATTGTTATTGTTGAGTTGCCC
CCCCCTCCCCTTTGGACCGTTTTTGATTATTAATACTGTTGAGTTGTCGC
CCCCACCCCTTTGGACCGTTTATTATTTTTTTTATTATTATTTTTATTTT
TATTATTATTATTTTATTATTATTATTTTTATTTTTATTTTTATTATCAT
TATTATCATTATTGTTATTAATATTGTCGAGTCCCTCCCCGCTGTTTGGA
CCGTTTTTTTATTTCTTTTGTTGAGCTGTCCCCCTAGCCCCTTTGGGCCG
TTTTTTGTTACTCCGAAGTATTGTTTTTATTGAGTTGCCCCCCCCCTCCC
CTTTGGACCGTTTTCTTCATGAGTTATTTCTTACGAAGTTTTATTTTGCG
ACGAGAGTGCCGATATCAAGTAAAACCTGGAAGTAACGGTACCGGACAGC
GCTGTCGGCGAGACGTTTCAAACGCGAATCACTGTTTTTCGGCGCTGGCA
CTTCGCCTGCAGGTGTGGAAACCCAACATCGAGCTGCGATATTATATTAT
ATTCTGGGGGTGGGCGGGCAGCGGGCAGAAGGGTTGCAGCACGTCACAGA
ACCAACAAATGCTGTCCTTTTCATATACGCTGGGAGTTGCTCTTGAGTTT
GGCTTTTTTGTACCTCCTCGGGGCCGTGAGGGGGGCTGCGTATGGCCCAA
CGCATTCTTGCTGTTGTTGTTGTCGATCGTCTTGATCTTGTTAGTTGATC
TTGCTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTAGTTGATCTTGT
TAGTTGATCTTGCTGTTGCTGTTGCTGTTGTTGCTGTTCGCTGGGTTTGT
TGTGTTTGCTGTGTTTCAGGACATCATCACGGTCTCTCCGGACAGGCTAG
AGGGCTACGAGAAGAAGATCAGGTCCTTCTTCGACGAGCATATGCACTCC
GATGAGGAGATCAGATACGTACTCGAAGGTGTGTCTGTGCGTAGTGTCAA
AACTCATCCACACCACGCATTAGTACACAGCAGTACCGCTATCGCACGAG
TTCGGAGGTCAGATACATTCTCGGTGGTTTCTGTTTACGATGACAATAGC
GCGCCCACACTGCTAGTACCTCTGTTGGCACACTGCTACCATACCAAACC
ACCGCGTTGGTTGGTAGGATATCGTACACATATGTACTCGAAGGTGTCCA
GATGCGCAATGTCGAAACGCATCCACACCAATAGAGTACCGCTGTTGTGG
TGAGAGACTACTTCGTGTATTCAAACTCGATGGTGTCTGTGTGCAACATT
GAAACGCGTACACTCTTCTAGTACCGCTATTGGTATGGTACCATCACTTC
GAAGCATGTCGCACGTGGCGGGAGGTGGAAGAACGTCCGTGTACGTGGTC
GATACACACACGACACTTGTGCAACTGCTACAGCATTATTTACATTACAC
GAGATGAGTGCGAAGCACACAAGGCACAGAATCTACCCTCAAAGCTCTGC
CAGGCCCTGAAGAAAACTCATGAGCTGCTTGTGGTTTCGTACGTGCTACT
TGCTTTTTTTTTTACTTGCTTATTTTTTTTCACGTTTTTTTTTTTCATGC
TTTCGCTACTCGCATATTATTTTTTTTAGATCGATATTATACGGCATCCA
CTGCTTGTATCCGAATCGTCACGTTCGTCTATAGCCCTCAGCTTGATTAT
CAAAATGTCCGCCTTGCCAACGAAGTGCTTCACGGTGCTTACCCCGAATG
TCGACGCTCTCCGTAGATGTGTCGCGCTATCCACAGAATGTTGACGTCGA
AAATCCAAACGACGACCTTTGCTAATCAAGTGCTCAACGTTGCAGACTAA
ACGGTGACGCTGTTCCGGTCGAATGTTTTGACCTCGAAAATCGAAAGTCC
CACCTTGTTAACCAGTGGTGATTTTTAATGTCCATGCTGATTCGTCGTTT
TTTTCACGTGGATTGGTCCCCCCCCCCGGTCCTTCCTGTCCGCACAGGCA
GCGGATACTTCGACGTCCGTGCTAAGGACGAGCGTTGGGTGAGGATCAAG
ATGGCCAAGGGCGACATGATCACCCTCCCCGCAGGCATTTACCACCGATT
CACTCTTGACGACTCTAACTACATCAAGGTCAGCAACACAAAAAAATCGA
AGTAGTTATTTACCCCCCCCCCCCAACCGATATAAAATAAATATAATTAT
TTCGTACACCCCCACCCCCCCTACCCCTTCCGTAATTTTATTCCACCGGT
ACTCCAAGGCGAGCAAACTTCACCAACATCTGCTGTTTTGTTCAAACGCT
CTCAAGTGTCTTGACTTTTTATGAAAACACGTGCCCCCCTCGCAAGAGGT
CTCCAGAACAAACCCTCTTTGGCCGCAGCCTTTCCACACTCCACACTCCG
CACTCCCTCGCTTGCGTCATATCAACGAGGGCCAGGCGCGGTCGACCTTC
TCCCCTTCCTGGCCAGCTCCGAGTGACGCACTACTGCATGCTGATTGCCC
AACGACTATTTCTTATTCCGCTGTGTATGATATCACAAAACTCAGATTTC
AACGCCTATCGTCTCTGGGATCTTCTGCTTCACGCCCCCCCCCCCCCCCC
CAAAACCAAACCAGCATTACGTAGCCCCCCTCCGGCGTGCCCACAGGAAA
AACCGCAGTACAGTAACAGTTCCACATGCGCGCCTTCCGGCACCTCCATG
ATACGGCCATGTACGTGCAGCCTTAAAACACGATACGACAGGACCATGAA
CGTTCCCGCGCGTCGCCACACGCTGTTGGTGTTGAACATTCATTGCTCGA
GCGCTTCCCTACACATGAATCAATCCATGTACCGTCATCATCCATTTTGT
GCTTGGGCACACGTCATGAGTGAATCACACCTCAACGCTTCGGCACCCTC
GATGGGGGTTGGTTGGAGGCACGCTGGTGATGTTGAACATCGCTCGAGCG
TAAAGCAATTTATCATGCGACATGCATGTTGATACATACATCTGCTAACG
TCGTGCGCGAATCACACCTCGACACCTCGTATTTATTTGGTGTTCTGGCC
ACCCATAGATGGTACCCCAACGGTACCATATCTGATCTGACTGTGGGTGA
TCATAGTCCATATATTTTATTTTTTTATTTTTTTCCTCCTAGCACGATAT
GTGCCTGGTTTGTGACCACGGGCTAGACTGCGGCGGTAGTGAGCTAATGT
GAGAATCAACAACAACAACAACAACAACCTCGACAATTTTGATGGGGCTG
AACACACGTCACCGACGATAGGGCGACAGGAGTGAGAGGGAGTCGAAAAA
AAAAGGTAAAAACTCTCGTTCCGCGATAGCACCCCCCAAAACCAGCGATT
TTCTTTAACGAACGTTTCATGGCTTTGAGAAACGAGGACTGGGGTTCCGA
AAAAAAAACAAAAATACACGTGGAATGTGCATGCCAAGAGCTATCAAAAA
ATGAAGTCGCCATTGTTCGAGACGTCGGACTTCCGATTGTCGGGCCAGGA
GCTGGTTTCAAAACCAGCGATTTTCGTTCAAGAAATCGAGGGGGGCTATG
ATCGCCGAACGACTCGAAAATGAGGAAAGAATGGCCGGGAGACAGCGGTT
GCGGCGTTCTCGTGACACGCACATGTTTCGTTTGGAACCCCGCATGATTT
TCGCGCACCCTTTGTGACCTCCCTCGTTCCTGTCTGTCGCGACCCCGACT
GATGCACCCACTTCATCCCGAAAGGTGTAGACTGCTGCCCAGAATAAACG
GAACGAAAACACACACACACACACGCACGCACACACTTTGATCCAAGTTG
ATAAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTTTCA
ATCCATTACAATAGTGAATTCGAGACGGCGCTTAGAAAACCCAGAGACCA
TCGCGATGTTTGCATGGTAACGGTAATTCCCATTTATCGCGGAATCGATG
CCAATCACCAAATACCGTAAAATTACAATTACCGTGGTAAAAACACCGAG
GTGCCCCCTGAAAAGAACGCATTCTCGCGTACTGTACATACGAAGTGTGT
ATTCATGCACGCCTTAAGCAAGCAGAAAACACCACCGCCATGTCGCGGTA
GCGCGGTGACCTGCGTCTTATCACGCTCTGGTCTGATATCCTGCTGGGGC
CGAGATATCGGAGGTCGAAGATGTGTGGGGTACAGCAGTAGTCCAGAAAA
CGTCCCCGCACCCCGAGCCCGGAACCTAGTGTTCTTCTTCACTCGGGAAC
GTCGGTGCTTCAGTAGTACAGCAGTGCTTCGATAAAAATAGCAGATCATT
CCACTGCTGTACACCCTACCTGATTTGACTGTGGGTGATCATAGTCCATA
CCATATATTTTATTTTCATTTTTCCTCCTAGCACGATATGTGCCTGGTTT
GTGACCACGGGCTAGACTGTGGCGGTAGTCAGCTAATGTGAGAATCAACA
ACAACAACAACAACATGTATATAGCTGCCTCGTACTCGTGTCGTGCCCGC
GGTCGAGGAGATCGCGGCCCAGGCTCACGACGGCGGGCACAGGAATAATG
GGGGATCTGTTTGGTTTCGGGCTGAGATGCGGACGGTTTCTGAACCGCGT
GAACCACATATCATATCGTCGACCTGCGACTACGGTTTCTCAACCGCCTG
ATCCACACATGTACGATATCTTCGACCTACTACTACGGTTTCTGGACCGC
CTGAACCACGTATGATATCTTCGACCTACTCCGTACCATATATCATACCG
ACACCATCTCGGTCGGCCCCAGCAGCAGATAGCTCTCAGCGCGTGTGCCA
ACACGCAGGTCACACCGCTTCAGGGTGCATGTTTTTTTTTTTGTTTTTTT
TTACGTACGTGTATGATATCATATGGACGTTTGTTTTTTTTGTGAAAGAC
GTCTTGAAAGTTGAACAGGGAATCGCCCTTTCTACTACTATCACAGAAGA
AACGGACCCATTCACCCAAAGAAGGCTTGTTGTGGTTGGGTGCAGACAGA
CCCCCCGGCCAGCCCCGAACACGCAGCCACAGCCCGGGAAATTGCCACAG
ACCGCTGATGATGACGTGGCGTTTTCGTCTTGCCACGAGGAAGCGACCAC
AGGCAGCCAGACACGGCGTATGATCTCGGGGACTCCATGAGGACAGCGGC
AGTTCGTTTGCGGTTTGTGCGGCCATCATTGTTTTCAGCTCGACGGCATA
ACGTATTTCAGCGCCTCTATTATACCATATGTTTTGCTCTTCTTGCAGCT
GGAACTTGCCGCTTGGTGGTTTCCCCCCCCTCCTTCTCCAGATTTCACTT
TATTTTTTCTCTCTGCCACACCTGTCCCACACCCGACGACCGAAAAAAAG
GATGGGATTCAGATGAGCCTGGGGCCACCGCAGGCTTTTGTGATGTACTT
CGAAGTATAAGTATATGATAGCAGGAGGAGCTTTGTTGTGGAGCCGTTTG
GCCCCCACGCGGCGGCTATCATTCAGCACCAATCCCAAACCTACACAGAC
AGGCGAGTTAGCTGACGAGTTCTGAAAACGCTTTGCCGAGTAGGACGAGA
ACTTCAAGACGAGGCAGGCTGCTGCTGGGCTGACCAGACAATTGCGACAC
CGCACAACACCTCTCAAGTCACCCGGTGTGCTGCAAATAATACTATAATT
GAACTGCTTGTTTTTATTTCTACCTGGTGCGACGTCACGGCTGAAACAGA
AACCTCAACCTTCTTTGAGAGCCCCCCAACAGACAATTTTGTTTTTTTTC
AGCTCAAAAAAAATAACGGTACGTATAGTGTCCGGGCCTGATCGATCGGT
ACTGCTGAACGATGAACAACCCCGTTTGCACCGCACCAGTCTTTAACGCC
TCCTTTGAGAAAAGACGTAACCCTTGATATTGTCCACGCGTTCCCCGGTG
GTCTCGATGGGTGTCCTGCCGCTACCACTGCTGCTGCTACTGCTGCTGCT
GCTGCTGCTGCTGGTTGCCGTTGTTTTTAGGCGATGCGGCTGTTCGTGGG
AGAGCCGGTGTGGACTCCGCTCAACCGGCCCCAAGACGACCATCCCGCCA
GGCGGGGCTACCTCGACAGCCTCGTCCACGGGGAGGCATGACCGCCAAAA
CGCTCTGCGGTACACACAAAAGTACGTCCCGCCAGGAAGGGCTACAGTAC
CTCAACAACTTCGTCCGCGGGGAGGAATGGCCGCCAAACACGCCGCAGTA
CATACGTATGACATGTACATACAACACATACGTATATATACTGTATACGA
AGTATATGCTGTGTCGTGCACGTGCTTCATTTTGAGCTGAGAACGGTACA
CTTCGGAAAGACGCCCCCCCCTCCCCCCCTTCCCTCCACGACTCTGTGGG
GCCTCCCCGGGAGGTCGAGGTCCGGGGGTGACGTGACGACCCCCCCAACC
CCCCCCCCTTCCCCTTCGTACCATGCCATTGGACCCGTCTTTTTTTTTCC
ACGCTAGTTTTAGACCGTTTGCAACTAAGTGCGAACCTTCCGCAGATTTA
GCAAATTTCGTTGTTGCTCTCGTATTTGTGGTACAGTGATATGATAGCAC
GGACGACACAGCAGCAGCAGTAGTTTTCGCGGGGTTGGGAGCGGAGTTTT
GGATCGAGAGCGTAGTTTTATTTTTATTTTTTGTAAGCCCGACCAATGCA
TTTTTTTTTTTTTTGCTGCTTGAATACTTGAATACGAACAAACGTCTAGA
GTAACCACAAACTCGTCGACATCTTGCGTGAGGCTTGAGGAAGAACTTTA
TTGGAAGTTTACATGTGGGTCGGAAAGGGAAAGCAAAATGTGAGCGCGTT
TCGACTGGCAAGCCTTTAAGGGCATGCATTCATTTCCGCCTGCTGAAACC
TTGACGGTTCCTGATGCTTTTTTTCTTGGAGATAAATAATCTGGATTCAT
TTGAGATTTACAACGATTGACGGGACATACAGCCTGCTCATGTTGTTTTC
ATGCCAGGTGCCGTGCTGGGTGTGGGGCACTCTTTGGGCTAAAACAGTAT
GTTTTGAACAACCCAGGCTGGGTTTCTCACAAACAATCATATTGTG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig679:100058..111103- >mRNA_P-littoralis_Contig679.11.1 ID=mRNA_P-littoralis_Contig679.11.1|Name=mRNA_P-littoralis_Contig679.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=567bp|location=Sequence derived from alignment at P-littoralis_Contig679:100058..111103- (Pylaiella littoralis U1_48) ATGTCCGTTTCATCCTCCGCGGCGATTGAGGCATGGTACATGGATGCAGA TGACACCGCTGACCAGAGGCTACCTCACCGACAGACCCCGAACGCCGAGT GCAACGCTGCGGAGCTGGAGTCCCTAGGCGTTCTCCACTGGAAACTGGAT GCAGACAGGCACGAGAGCGACCCTGCGCTGGACCAGATCAGAAGCGACCG CGGTTACTCGTACCAGGACATCATCACGGTCTCTCCGGACAGGCTAGAGG GCTACGAGAAGAAGATCAGGTCCTTCTTCGACGAGCATATGCACTCCGAT GAGGAGATCAGATACGTACTCGAAGGTGTCGGATACTTCGACGTCCGTGC TAAGGACGAGCGTTGGGTGAGGATCAAGATGGCCAAGGGCGACATGATCA CCCTCCCCGCAGGCATTTACCACCGATTCACTCTTGACGACTCTAACTAC ATCAAGGCGATGCGGCTGTTCGTGGGAGAGCCGGTGTGGACTCCGCTCAA CCGGCCCCAAGACGACCATCCCGCCAGGCGGGGCTACCTCGACAGCCTCG TCCACGGGGAGGCATGA back to top
|