mRNA_P-littoralis_Contig678.43.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig678.43.1
Unique NamemRNA_P-littoralis_Contig678.43.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 523 bits (1346), Expect = 3.290e-181
Identity = 271/425 (63.76%), Postives = 309/425 (72.71%), Query Frame = 1
Query:    1 DVDQALADYINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATG--------------------------GKEKKRFTLCLAVTADG-----------------------KATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHAWC 1041
            D+++AL ++INDQRK H GCG+  VMNKLLE+KPD LGGL A    EE LA+K KF +WYQRFRKR++FSIRRR+SVG +LPKG EGMAWATLMKLR+AL                             QL+ V +E+F++LGNMDQTPVQ+EMP ETTL++ G KDARIATG                          GKEK+RFTLCLAV+ADG                       KATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSW DLRE KLWIK+SW+ RPNNGSV++QR CILVLDDFKCH+DD FIA LKR+ NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE VKTCFKIC L+LALDGS+DHAWC
Sbjct:   63 DIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWC 487          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 516 bits (1330), Expect = 1.280e-171
Identity = 263/389 (67.61%), Postives = 296/389 (76.09%), Query Frame = 1
Query:    1 DVDQALADYINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKRFTLCLAVTADGK-----------------------ATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLA 1011
            D+++AL ++INDQRK H GCG+   MNKLLE+KPDALGGL A    EE LA   KF +WYQRF KR++FSIRRR+SVGQKLPKG EGMAWATLMKLR+AL                             QL+ V +E+FEELGNMDQTPVQHEMP ETTL+  G KDARIATGGKEK+RFTLCLAV+ADGK                       ATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSW DLRECKLWIK+SW+ RPNNGS+++QR CILVLDDFKCH+DD FIA LKR+ NTIVIFIPGGL PL QPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE+VKTCFKIC L+LA
Sbjct:  130 DIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 493 bits (1270), Expect = 3.880e-169
Identity = 261/408 (63.97%), Postives = 290/408 (71.08%), Query Frame = 1
Query:    1 DVDQALADYINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKRFTLCLAVTADGK-----------------------ATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRA--------RPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHAWCT 1044
            D +QAL DYIN+QRK H GCGN EVMNKLLE+KPDALGG+PANA  EE LA+KVKFN+WYQRFRKR+ FSIRRR+SVGQKLPKG EGMAWAT+ KLREAL                             Q  SV  EVFEELGNMDQTPVQHEMP ETTL+  G KDARI+TGGKEK+RFTL LAV ADGK                       +T PRKNS+A E+ P NR K GHP  GMSFGVQEKSW   +EC  WI  SW+         RPNNGS+++QR CILVLDDFKCH+D+ FIA L RD NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG YT +SA A  D ++GKL PP RG VSTWCK+AW  +T E V TCFKIC L+LALDGS+DHA CT
Sbjct:  130 DAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA-CT 536          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 478 bits (1230), Expect = 3.640e-165
Identity = 248/374 (66.31%), Postives = 275/374 (73.53%), Query Frame = 1
Query:   76 MNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKRFTLCLAVTADGK-----------------------ATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHAWC 1041
            MNKLLE+KPDALGG+PANA  EE LA+KVKFN+WYQRFRKR+ FSIRRR+SVGQKLPKG EGMAWAT+MKLREAL                             QL SV  EVFEELGNMDQTPVQHE+P ETTL++ G KDARI+TGGKEK+RFTL LAV ADGK                       +T PRKNS+A EI P NR K GHP  GMSFGVQEKSW D REC  WI  SW+ RPNNGS+++QR CILVLDDFKCH+D+ FIA LKRD NTIVIFIPG LTPLLQPLDRMLNKQMKRLLR  YT +SASA  D ++GKL PP RG VSTWCK+AW + TPE VKTCF IC L+LALDGS+DHAWC
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAWC 374          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 469 bits (1208), Expect = 8.760e-160
Identity = 243/400 (60.75%), Postives = 280/400 (70.00%), Query Frame = 1
Query:    1 DVDQALADYINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKRFTLCLAVTADGKATQPRKNSIAAEI------------------------LPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHAWC 1041
            D+++AL ++INDQRK H GCG+  VMNKLLE+KPDALGGL A    EE LA+K KF +WYQRFRKR++FSIRRR+SVGQKLPKG EGMAWATLMKLR+AL                             QL+ V +E+FEELGNMDQTPVQHEMP ETTL++ G KDARIATG  EK+R     A      A     +S    +                         P+     G P      GVQEKSW DLRECKLWIK+SW+ RPNNGS+++QR CILVLDDFKCH+DD FIA L ++ NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT ++A AARDPKTG L PPGRGAV+TWCK+AWA+ITPE VKTCFKIC L+LALDGS+DHAWC
Sbjct:  125 DIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDALGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKAGAKDARIATGAGEKRRNASRSAWLPRRMARSRLASSSRVRLSFRLPRPGXXXXXXXXXXXXXXXYFPRTAPSTGSPWEACPSGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAWC 524          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 468 bits (1205), Expect = 9.550e-160
Identity = 246/399 (61.65%), Postives = 279/399 (69.92%), Query Frame = 1
Query:    1 DVDQALADYINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKRFTLCLAVTADGK-----------------------ATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHAWC 1041
            D+++AL ++INDQRK H GCG+  VMNKLLE+KPDA GGL A    EE LA                 F+IRR +SVGQKLPKG EGMAWATLMKLR+AL                             QL+ V +E+FEELGNMDQTPVQHE P E   +    +  R       ++RFTLCLAV+ADGK                       ATQPRKNSIA E+LP NR K G P+GGMSFGVQEKSW DLRECKLWIK+SW+ RPNNGS+++QR CILVLDDFKCH+DD FIA LKR+ NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT H+A AARDPKTGKL PPGRGAV+TWCK+AWA+ITPE  KTCFKIC L+LALDGS+DHAWC
Sbjct:  117 DIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDAAGGLTAKPKPEEALA-----------------FNIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVERLWK----RPVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAWC 494          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 463 bits (1192), Expect = 1.480e-157
Identity = 245/400 (61.25%), Postives = 283/400 (70.75%), Query Frame = 1
Query:    1 DVDQALADYINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKRFTLCLAVTADG-----------------------KATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHAWCT 1044
            +V+Q L DYIN+QR++H GCG+ EVMNKLLE+KPDALGGL A A+AEE LA++ KF NWY RFR+RH  SIRRR+SVGQKLP G EG+A+ATLMKLR AL                             QL+SVA EVFEELGNMDQTPVQ EMP ETTL++ G KDARI+TGGKEK+RFTLCLAV ADG                       K TQPRK SIAAE+LP N+  FG+P+ GMSFGVQE+SW D  EC LW+ ESW  RPN+GSV+KQR  ILVLDDF+              TNT VI IPGGLTPLLQPLDRML+K+MKRL+R  YT++ ASA  DPKTGKL PPGRG VSTWCK++WA IT E VK CFK+C L+LALDGS+D AWCT
Sbjct:  149 EVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFR--------------TNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAWCT 534          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 457 bits (1175), Expect = 1.570e-157
Identity = 245/403 (60.79%), Postives = 274/403 (67.99%), Query Frame = 1
Query:   76 MNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKRFTLCLAVTADGK-----------------------ATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMV-----------------------------KTCFKICRLSLALDGSDDHAWC 1041
            MNKLLE+KP+ALGG+ ANA   E LA+KVK N+WYQRFRKR+ FSIRRR+SVGQKLPKG EGMAWAT+MKLREAL                             QL SV  EVF+ELGNMDQTPVQHEMP ETTL++ G KDARI+TGGKEK+RFTL LAV ADGK                       +T PRKNS+A EI P NR K  HP  GMSFGVQEKSW D REC  WI  SW+ RPNNGS+++QR CILVLDDFKCH+D+ +IA LKRD NTIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YT +SASA  D ++GKL PP RG VSTWCK+AW +ITPE V                             KTCFKIC L+LALDGS+DHAWC
Sbjct:    1 MNKLLELKPNALGGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHAWC 403          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 462 bits (1188), Expect = 7.830e-156
Identity = 244/378 (64.55%), Postives = 272/378 (71.96%), Query Frame = 1
Query:   61 GNAEVMNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGG-KEKKRFTLCLAVTADGK-----------------------ATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHA 1035
            GN EVMNKLLE+KPDALGG+PANA  EE + +K KFN+WYQRFRKR+ FSIRRR+SVGQKLPKG EGMAWAT+MKL EAL                             QL SV  EVFEE+GNMDQ PVQHEMP ETTL + G KDARI+TGG  EK+RFTL LAVTADGK                       +T+PRKN +A E+ P NR K GHP  GMSFGVQEKSW D REC  WI  SW+ RPNNGS+++QR  ILVLDDFKCH D+ FIA LKRD NTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG YT +S SA  D ++GKL PP RG VSTWCK+AW +ITPE VKTC KIC L+LALDGS+DHA
Sbjct:  190 GNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA 567          
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 456 bits (1172), Expect = 1.180e-153
Identity = 249/413 (60.29%), Postives = 281/413 (68.04%), Query Frame = 1
Query:    1 DVDQALADYINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANATAEEGLAYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL-----------------------------QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKRFTLCLAVTADGK-----------------------ATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQ--------------EKSWRDLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRDTNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGKLTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHAWC 1041
            D +QAL DY+N+QRKQH  CGN EVMNKLLE+KPDALGG+  NA  EE LA+KVKFN+WYQRFRKR+ FSIRRR+SVGQKLPKG EGMAWAT+MKLREAL                             QL SV  EVFEELGNMDQTPVQHEMP ETTL++ G KDARI+TGG+EK+RFTL LAV ADGK                       +T PRKNS+A EI   N  + G   GG    V               EKSW D REC  WI  SW+ RPNNGS+++QR CILVLDDFKCH+D+ FIA LKR   T VIFIPGGLT LLQPLDRMLNKQMKRLLRG YT  SASA  D ++GKL PP  G VSTWCK+AW +IT + V+TCFKIC L+LALDGS+ HAWC
Sbjct:  158 DAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCH-GGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHAWC 568          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig678.43.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE45_9PHAE3.290e-18163.76DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.280e-17167.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE3.880e-16963.97DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE3.640e-16566.31DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KYG9_9PHAE8.760e-16060.75DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE9.550e-16061.65DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE1.480e-15761.25DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE1.570e-15760.79DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE7.830e-15664.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE1.180e-15360.29DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig678contigP-littoralis_Contig678:147153..148690 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size1044
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue7.83e-104
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size1044
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791409.2472208-CDS-P-littoralis_Contig678:147152..1474521680791409.2472208-CDS-P-littoralis_Contig678:147152..147452Pylaiella littoralis U1_48CDSP-littoralis_Contig678 147153..147452 +
1680791409.266826-CDS-P-littoralis_Contig678:147539..1476721680791409.266826-CDS-P-littoralis_Contig678:147539..147672Pylaiella littoralis U1_48CDSP-littoralis_Contig678 147540..147672 +
1680791409.2801123-CDS-P-littoralis_Contig678:148013..1480651680791409.2801123-CDS-P-littoralis_Contig678:148013..148065Pylaiella littoralis U1_48CDSP-littoralis_Contig678 148014..148065 +
1680791409.2908716-CDS-P-littoralis_Contig678:148131..1486901680791409.2908716-CDS-P-littoralis_Contig678:148131..148690Pylaiella littoralis U1_48CDSP-littoralis_Contig678 148132..148690 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig678.43.1prot_P-littoralis_Contig678.43.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig678 147153..148690 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig678.43.1

>prot_P-littoralis_Contig678.43.1 ID=prot_P-littoralis_Contig678.43.1|Name=mRNA_P-littoralis_Contig678.43.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=348bp
DVDQALADYINDQRKQHCGCGNAEVMNKLLEMKPDALGGLPANATAEEGL
AYKVKFNNWYQRFRKRHRFSIRRRSSVGQKLPKGQEGMAWATLMKLREAL
QLKSVAEEVFEELGNMDQTPVQHEMPAETTLQQRGDKDARIATGGKEKKR
FTLCLAVTADGKATQPRKNSIAAEILPQNRRKFGHPMGGMSFGVQEKSWR
DLRECKLWIKESWRARPNNGSVLKQRACILVLDDFKCHEDDEFIAFLKRD
TNTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTKHSASAARDPKTGK
LTPPGRGAVSTWCKDAWATITPEMVKTCFKICRLSLALDGSDDHAWCT
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mRNA from alignment at P-littoralis_Contig678:147153..148690+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig678.43.1 ID=mRNA_P-littoralis_Contig678.43.1|Name=mRNA_P-littoralis_Contig678.43.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1538bp|location=Sequence derived from alignment at P-littoralis_Contig678:147153..148690+ (Pylaiella littoralis U1_48)
GACGTCGACCAAGCTTTGGCGGACTACATCAACGACCAGCGCAAGCAGCA CTGCGGCTGTGGCAACGCAGAGGTCATGAACAAGCTGCTGGAGATGAAGC CCGACGCCCTAGGCGGGCTACCAGCCAATGCGACGGCGGAAGAGGGGCTG GCGTACAAGGTCAAGTTCAACAACTGGTACCAACGTTTTCGCAAGCGGCA CAGGTTCAGCATCCGCCGACGTAGCAGCGTGGGCCAAAAGCTACCGAAGG GACAGGAGGGCATGGCATGGGCAACGCTGATGAAGCTGCGCGAGGCTCTC GTGAAGCGCGCTGGGGAGATCTACGCTCGGCGCCACCCCCCTGCACCTGG TGAGAGCTCCGTCGACGGGAAGGACCTGACTTCCGAGCAGCTAAAGTCGG TCGCCGAAGAGGTGTTCGAAGAACTCGGCAACATGGACCAGACGCCAGTC CAGCACGAGATGCCGGCGGAGACGACGCTGCAGCAGCGCGGTGATAAGGA CGCTCGCATTGCAACAGGAGGTGAGAGTGAACTGCGGTGCTGCGAGTTGT GTACGAGGAGTACCTACATGTTTCCCTGTTCCTATCAAGTATTGGCGTTT TCGTTGTTGCAGGTTTCTTTTTGGTCTTGGTGTTTTGTACTCGGTATTTT TTAGTTCTGGGAAATCCGTACGTATACAATTTGCAGCCATGTCAACACCT CTTTCCGATGCAGTTTTTGATCGTGGTGTTTTTTCCTCTCTTGGAAATCC GTACGTGTACCGTCTGCAGCCATCCATGTCAAGCGCCATCTGCTGGTCAG CATTGTTTAAACCCCTCCTCCTACTCGCCTACCCCCTACCGTCGTGTGCA CCCGTCCCCAGGAAAGGAGAAGAAACGCTTCACGCTTTGCCTTGCTGTCA CGGCGGACGGGAAGTAGGTTCCGGTGCGCATCATCTTTAAGAGGACGCCG TTCATCCCGACGGTCACCGGTGTGGGCAGGGCAACTCAGCCGCGGAAGAA TTCCATCGCGGCTGAGATCCTTCCCCAGAACCGTCGCAAGTTCGGGCACC CCATGGGAGGCATGTCTTTCGGCGTGCAGGAGAAAAGCTGGCGCGACCTG CGGGAGTGCAAGCTCTGGATCAAGGAGAGCTGGAGGGCCCGCCCGAACAA CGGCAGCGTCCTCAAGCAGCGGGCATGCATCTTGGTGCTGGACGACTTCA AGTGCCACGAGGACGACGAGTTCATCGCCTTCCTCAAGAGGGACACCAAC ACCATCGTCATCTTCATCCCAGGCGGGTTGACTCCTCTCCTCCAACCGCT GGATCGCATGCTCAACAAGCAGATGAAGCGGCTGCTGCGGGGCATGTACA CGAAGCACTCGGCGTCGGCGGCCAGAGACCCCAAGACGGGCAAGCTGACA CCGCCTGGGCGTGGTGCCGTCTCGACGTGGTGCAAGGACGCGTGGGCAAC CATCACGCCGGAGATGGTCAAGACTTGTTTCAAGATCTGCCGCCTCTCGC TTGCGCTCGACGGCAGCGACGACCACGCCTGGTGCACG
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Coding sequence (CDS) from alignment at P-littoralis_Contig678:147153..148690+

>mRNA_P-littoralis_Contig678.43.1 ID=mRNA_P-littoralis_Contig678.43.1|Name=mRNA_P-littoralis_Contig678.43.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1044bp|location=Sequence derived from alignment at P-littoralis_Contig678:147153..148690+ (Pylaiella littoralis U1_48)
GACGTCGACCAAGCTTTGGCGGACTACATCAACGACCAGCGCAAGCAGCA
CTGCGGCTGTGGCAACGCAGAGGTCATGAACAAGCTGCTGGAGATGAAGC
CCGACGCCCTAGGCGGGCTACCAGCCAATGCGACGGCGGAAGAGGGGCTG
GCGTACAAGGTCAAGTTCAACAACTGGTACCAACGTTTTCGCAAGCGGCA
CAGGTTCAGCATCCGCCGACGTAGCAGCGTGGGCCAAAAGCTACCGAAGG
GACAGGAGGGCATGGCATGGGCAACGCTGATGAAGCTGCGCGAGGCTCTC
CAGCTAAAGTCGGTCGCCGAAGAGGTGTTCGAAGAACTCGGCAACATGGA
CCAGACGCCAGTCCAGCACGAGATGCCGGCGGAGACGACGCTGCAGCAGC
GCGGTGATAAGGACGCTCGCATTGCAACAGGAGGAAAGGAGAAGAAACGC
TTCACGCTTTGCCTTGCTGTCACGGCGGACGGGAAGGCAACTCAGCCGCG
GAAGAATTCCATCGCGGCTGAGATCCTTCCCCAGAACCGTCGCAAGTTCG
GGCACCCCATGGGAGGCATGTCTTTCGGCGTGCAGGAGAAAAGCTGGCGC
GACCTGCGGGAGTGCAAGCTCTGGATCAAGGAGAGCTGGAGGGCCCGCCC
GAACAACGGCAGCGTCCTCAAGCAGCGGGCATGCATCTTGGTGCTGGACG
ACTTCAAGTGCCACGAGGACGACGAGTTCATCGCCTTCCTCAAGAGGGAC
ACCAACACCATCGTCATCTTCATCCCAGGCGGGTTGACTCCTCTCCTCCA
ACCGCTGGATCGCATGCTCAACAAGCAGATGAAGCGGCTGCTGCGGGGCA
TGTACACGAAGCACTCGGCGTCGGCGGCCAGAGACCCCAAGACGGGCAAG
CTGACACCGCCTGGGCGTGGTGCCGTCTCGACGTGGTGCAAGGACGCGTG
GGCAACCATCACGCCGGAGATGGTCAAGACTTGTTTCAAGATCTGCCGCC
TCTCGCTTGCGCTCGACGGCAGCGACGACCACGCCTGGTGCACG
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