prot_P-littoralis_Contig677.38.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig677.38.1
Unique Nameprot_P-littoralis_Contig677.38.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length255
Homology
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: D7G8U3_ECTSI (Ribosomal_L2_C domain-containing protein n=3 Tax=Eukaryota TaxID=2759 RepID=D7G8U3_ECTSI)

HSP 1 Score: 502 bits (1292), Expect = 1.580e-179
Identity = 242/254 (95.28%), Postives = 251/254 (98.82%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRMEKE 254
            MGKVIRGQRKGKGGIFTSHTRLRKGPVK RKLDYAERHGYIKGV+KD+IHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMP+ SMPEGTVCSSIEAK+GDRGTFARCSGDYAVLISHDE+KGTSK+RLPSGSKKT+SSDCRAMVGIVAGGGRTDKPMLKAGRA+HK+RVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR EKE
Sbjct:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKLRKLDYAERHGYIKGVVKDLIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPVRSMPEGTVCSSIEAKVGDRGTFARCSGDYAVLISHDEEKGTSKLRLPSGSKKTISSDCRAMVGIVAGGGRTDKPMLKAGRAYHKFRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRTEKE 254
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: A0A7S2V227_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S2V227_9STRA)

HSP 1 Score: 445 bits (1144), Expect = 6.620e-157
Identity = 212/250 (84.80%), Postives = 232/250 (92.80%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR 250
            MGKVIRGQRKGKG +F SHT+ RKG VKFRKLDYAERHGY+KGV+K I+HEPGRGAPLA V F+NPY+FK+D EL+VAVEGMYSG FIYCGKKA LT+GNIMP+ +MPEGTVC +IEA  GDRGTFARCSGDYAV+ISHDEDKGTS+IRLPSGSKKT+ S CRAMVGIVAGGGRTDKPMLKAGRA+HKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST+NRLASAG+KVGLIAARRTGRLRGI+
Sbjct:    1 MGKVIRGQRKGKGSVFVSHTKNRKGAVKFRKLDYAERHGYVKGVVKQILHEPGRGAPLAVVAFKNPYRFKKDTELMVAVEGMYSGMFIYCGKKAILTIGNIMPVGAMPEGTVCCNIEAAPGDRGTFARCSGDYAVVISHDEDKGTSRIRLPSGSKKTIKSLCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTSNRLASAGKKVGLIAARRTGRLRGIK 250
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: A0A835ZD66_9STRA (Translation protein SH3-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD66_9STRA)

HSP 1 Score: 441 bits (1133), Expect = 3.140e-155
Identity = 206/254 (81.10%), Postives = 234/254 (92.13%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRMEKE 254
            MGKVIRG RKG+G +FTSHTRLRKGPVK RKLDYAERHGYIKGV+K+IIHEP RGAP+AK+QFQNPY++K+DNELIVA EGMY+G FIYCGKKA LTVGNI+P+ SMPEG+V  ++E++ GDRG+ ARCSGDYAV+++HDEDKGT+KIRLPSGSKKT+ S+CRAMVGI+AGGGRTDKP+LKAGRA+HKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  RLASAGQKVGLIAARRTGRLRGI+   E
Sbjct:    1 MGKVIRGCRKGRGTVFTSHTRLRKGPVKLRKLDYAERHGYIKGVVKEIIHEPARGAPIAKIQFQNPYEYKKDNELIVAAEGMYTGMFIYCGKKAQLTVGNILPVGSMPEGSVICNVESRPGDRGSLARCSGDYAVVVTHDEDKGTTKIRLPSGSKKTIFSNCRAMVGIIAGGGRTDKPLLKAGRAYHKYRVKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTTKRLASAGQKVGLIAARRTGRLRGIKKTSE 254
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: A0A7R9UAP5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAP5_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 1.450e-144
Identity = 190/250 (76.00%), Postives = 225/250 (90.00%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR 250
            MGKV+RG RKGKG +F SHTRLRKGP K R+LD++ER GY+KG++K+I+HEPGRGAPLA++QFQNPYK+++DNEL+V  EGMYSGQFI+CGKKA L+VGNI+PL  +PEGTV  ++E+ IGDRG   + SG Y V+I+ DEDKGTS+IRLPSG+KKT+S+ CRAMVGIVAGGGRTDKPMLKAGRA+HKYRVKRNEWP VRGVAMNPVEHPFGGGNHQHIGHPST NR+ SAG+KVGLIAARRTGRLRG++
Sbjct:    1 MGKVVRGCRKGKGSVFKSHTRLRKGPAKLRRLDFSERTGYVKGLVKEILHEPGRGAPLARIQFQNPYKYQKDNELMVCAEGMYSGQFIFCGKKADLSVGNILPLGQLPEGTVVCNVESYIGDRGNLIKTSGGYGVVITQDEDKGTSRIRLPSGAKKTLSNKCRAMVGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPFGGGNHQHIGHPSTTNRMCSAGKKVGLIAARRTGRLRGVK 250
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: F0YEL9_AURAN (Ribosomal_L2_C domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEL9_AURAN)

HSP 1 Score: 413 bits (1061), Expect = 2.820e-144
Identity = 193/250 (77.20%), Postives = 220/250 (88.00%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR 250
            MGKVIRG RKGKG IFT+HTRLRKGPVK RK DYAE+ GY+KGV+K I+HE GRGAP+AKVQFQN Y+F+RDNEL VA EG+Y G FIYCG KA L VGN++P+ ++PEGTV  + EA+ GDRG FARCSGDYAV+++HDED GT+K+RLPSG KKTV S CRAM+GIVAGGGRTDKPMLKAGRA+HKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R+ SAG+KVGLIAARRTGRLRG++
Sbjct:    1 MGKVIRGCRKGKGTIFTAHTRLRKGPVKLRKADYAEKTGYVKGVVKAIVHESGRGAPIAKVQFQNSYRFQRDNELFVAAEGLYEGAFIYCGAKAQLAVGNVLPISAIPEGTVICNAEARPGDRGAFARCSGDYAVVVTHDEDHGTTKLRLPSGGKKTVKSVCRAMIGIVAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTTKRICSAGKKVGLIAARRTGRLRGLK 250
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: A0A7S2WUG0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG0_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 6.760e-142
Identity = 195/254 (76.77%), Postives = 219/254 (86.22%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRMEKE 254
            MGKV RGQRKGKG IF SHTRLR G VK R LDYAER G+ KGVIKD +HEPGRGAP+AKVQF N Y++KRDN L VAVEGMY+GQF+YCGKKA LTVGNI+PL +MPEGT+  +IEAK GDRG  A+CSGDYAV+++HDEDKGT+++RLPSGSKKT+S+ CRA VGIVAGGGRTDKP+LKAGRAFHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R   AG+K GLIAARRTGRL G ++  E
Sbjct:   20 MGKVTRGQRKGKGSIFKSHTRLRVGEVKQRALDYAEREGFTKGVIKDFVHEPGRGAPVAKVQFHNAYRYKRDNNLFVAVEGMYTGQFLYCGKKAKLTVGNILPLGAMPEGTIVCNIEAKPGDRGKMAKCSGDYAVVVTHDEDKGTTRVRLPSGSKKTLSNKCRAAVGIVAGGGRTDKPLLKAGRAFHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTTRREDPAGKKAGLIAARRTGRLAGKKVIDE 273
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: A0A418F530_9STRA (Ribosomal_L2_C domain-containing protein n=14 Tax=Saprolegniaceae TaxID=4764 RepID=A0A418F530_9STRA)

HSP 1 Score: 402 bits (1033), Expect = 5.000e-140
Identity = 186/250 (74.40%), Postives = 219/250 (87.60%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR 250
            MG+VIRGQRKG GGIF SH + RKG   FR  DY ER GYIKGVIK+IIH+PGRGAPLA+V F++PYK++ ++EL++A EGMY+G FIY GKKA++ VGNI+PL  +PEGT+  ++EA+IGD+G FARCSGDYAV+++HDEDKG +KIRLPSGSKKT+ S CRAMVG+VAGGGRTDKP+LKAGRA+HKYRVKRNEWPHVRGVAMNPVEHP GGGNHQHIGHPST  R   AG+KVGLIAARRTGRLRGI+
Sbjct:    1 MGRVIRGQRKGAGGIFKSHVKTRKGKAAFRTNDYVEREGYIKGVIKEIIHDPGRGAPLARVSFRDPYKYRINHELLIAAEGMYTGMFIYAGKKATMAVGNILPLSQLPEGTIVCNVEARIGDKGKFARCSGDYAVIVTHDEDKGKTKIRLPSGSKKTIPSACRAMVGVVAGGGRTDKPILKAGRAYHKYRVKRNEWPHVRGVAMNPVEHPHGGGNHQHIGHPSTVKRDPPAGKKVGLIAARRTGRLRGIK 250
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: K3X5U7_GLOUD (Ribosomal_L2_C domain-containing protein n=5 Tax=Eukaryota TaxID=2759 RepID=K3X5U7_GLOUD)

HSP 1 Score: 399 bits (1026), Expect = 5.820e-139
Identity = 185/255 (72.55%), Postives = 226/255 (88.63%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR-MEKE 254
            MG+VIRGQRKG GGIF SHT  R+G   FR LDY ERHGYIKGV+K+IIH+ GRGAPLA+V +++PY++K ++EL++A EGMY+GQFIY G KA++TVGNI+PL ++PEGT+  ++EA++GDRG+FAR SGDYAV+++HDEDKG +K+RLPSGSKKTV S CRAM+G+VAGGGRTDKP+LKAGRA+HKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R A +G+KVGLIAARRTGRLRGI+ +EK+
Sbjct:    1 MGRVIRGQRKGAGGIFKSHTAKRQGAAAFRSLDYVERHGYIKGVVKEIIHDSGRGAPLARVTYRDPYRYKLNHELLIAAEGMYTGQFIYSGAKAAMTVGNILPLSALPEGTIVCNVEARVGDRGSFARASGDYAVIVTHDEDKGRTKLRLPSGSKKTVPSACRAMIGVVAGGGRTDKPILKAGRAYHKYRVKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDAPSGKKVGLIAARRTGRLRGIKKVEKD 255
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: I2CPH3_NANGC (Large subunit ribosomal protein L8e n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPH3_NANGC)

HSP 1 Score: 399 bits (1026), Expect = 6.030e-139
Identity = 188/254 (74.02%), Postives = 221/254 (87.01%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIRMEKE 254
            MGKVIR  RKG GGIF SHT+L K PVK RKLDYAE+HGYIKGV+K+I+HE GRGAP+A+VQF+N Y+FKRD E  VAVEG+YSGQFI+ GKKA+L +GN++PL  +PEGTV S++EA+ GDRG+FAR SG YAV+++ DED+GT+KIRLPSG+KKTVSS  R ++GI+AGGGRTDKPMLKAGRA+HKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R A AG+KVGL+AARRTGRLRGI+   E
Sbjct:    1 MGKVIRTCRKGVGGIFKSHTKLNKNPVKLRKLDYAEKHGYIKGVVKEIVHESGRGAPIARVQFKNAYRFKRDTESFVAVEGIYSGQFIFAGKKAALVIGNVLPLSQIPEGTVVSNVEARPGDRGSFARTSGGYAVIVAQDEDRGTTKIRLPSGAKKTVSSSSRGVIGIIAGGGRTDKPMLKAGRAYHKYRVKRNEWPKVRGVAMNPVEHPHGGGNHQHIGHPSTVKRDAPAGKKVGLVAARRTGRLRGIKKNAE 254
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BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Match: H3G973_PHYRM (Ribosomal_L2_C domain-containing protein n=28 Tax=Oomycota TaxID=4762 RepID=H3G973_PHYRM)

HSP 1 Score: 396 bits (1017), Expect = 1.370e-137
Identity = 185/255 (72.55%), Postives = 223/255 (87.45%), Query Frame = 0 
Query:    1 MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIHEPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGNIMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRLPSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVRGVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR-MEKE 254
            MG+VIRGQRKG G IF SHT LRKGP  FR LD+ ER GYIKGV+K+IIH+ GRGAPLA+V +++PY+F+ ++EL++A EGMY+G F+Y G KA+LTVGN +PL ++PEGT+  ++EAK+GDRG+FAR SGDYAV+++HDEDKG +K+RLPSGSKK V S CRAM+G+VAGGGRTDKP+LKAGRAFHKYRVKRNEWP VRGVAMNPVEHP GGGNHQHIGHPST  R A AG+KVGLIAARRTGRLRGI+ +EK+
Sbjct:    1 MGRVIRGQRKGAGSIFKSHTHLRKGPAAFRALDFVERTGYIKGVVKEIIHDSGRGAPLARVTYRDPYRFQLNHELLIAAEGMYTGMFVYSGPKATLTVGNTLPLSALPEGTIVCNVEAKVGDRGSFARASGDYAVIVTHDEDKGKTKLRLPSGSKKDVPSACRAMIGVVAGGGRTDKPILKAGRAFHKYRVKRNEWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDAPAGKKVGLIAARRTGRLRGIKKVEKD 255
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig677.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8U3_ECTSI1.580e-17995.28Ribosomal_L2_C domain-containing protein n=3 Tax=E... [more]
A0A7S2V227_9STRA6.620e-15784.80Hypothetical protein n=2 Tax=Sar TaxID=2698737 Rep... [more]
A0A835ZD66_9STRA3.140e-15581.10Translation protein SH3-like domain-containing pro... [more]
A0A7R9UAP5_9STRA1.450e-14476.00Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
F0YEL9_AURAN2.820e-14477.20Ribosomal_L2_C domain-containing protein n=1 Tax=A... [more]
A0A7S2WUG0_9STRA6.760e-14276.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A418F530_9STRA5.000e-14074.40Ribosomal_L2_C domain-containing protein n=14 Tax=... [more]
K3X5U7_GLOUD5.820e-13972.55Ribosomal_L2_C domain-containing protein n=5 Tax=E... [more]
I2CPH3_NANGC6.030e-13974.02Large subunit ribosomal protein L8e n=1 Tax=Nannoc... [more]
H3G973_PHYRM1.370e-13772.55Ribosomal_L2_C domain-containing protein n=28 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022669Ribosomal protein L2, C-terminalSMARTSM01382Ribosomal_L2_C_2coord: 96..231
e-value: 1.5E-64
score: 230.4
IPR022669Ribosomal protein L2, C-terminalPFAMPF03947Ribosomal_L2_Ccoord: 98..221
e-value: 2.7E-43
score: 147.1
IPR002171Ribosomal protein L2SMARTSM01383Ribosomal_L2_2coord: 11..90
e-value: 1.4E-31
score: 120.9
IPR002171Ribosomal protein L2PIRSFPIRSF002158RPL2p_RPL2a_RPL8e_RPL2ocoord: 1..254
e-value: 2.3E-67
score: 225.1
IPR002171Ribosomal protein L2PANTHERPTHR13691RIBOSOMAL PROTEIN L2coord: 1..252
IPR012340Nucleic acid-binding, OB-foldGENE3D2.40.50.140coord: 1..86
e-value: 9.6E-37
score: 127.0
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..97
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 90..169
e-value: 2.3E-23
score: 83.8
IPR014726Ribosomal protein L2, domain 3GENE3D4.10.950.10Ribosomal protein L2, domain 3coord: 170..247
e-value: 1.1E-39
score: 136.7
IPR022666Ribosomal Proteins L2, RNA binding domainPFAMPF00181Ribosomal_L2coord: 11..90
e-value: 8.9E-16
score: 57.6
NoneNo IPR availablePANTHERPTHR13691:SF1660S RIBOSOMAL PROTEIN L8coord: 1..252
IPR022671Ribosomal protein L2, conserved sitePROSITEPS00467RIBOSOMAL_L2coord: 197..208
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 99..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig677contigP-littoralis_Contig677:143077..147421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig677.38.1mRNA_P-littoralis_Contig677.38.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig677 142166..147421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig677.38.1 ID=prot_P-littoralis_Contig677.38.1|Name=mRNA_P-littoralis_Contig677.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=255bp
MGKVIRGQRKGKGGIFTSHTRLRKGPVKFRKLDYAERHGYIKGVIKDIIH
EPGRGAPLAKVQFQNPYKFKRDNELIVAVEGMYSGQFIYCGKKASLTVGN
IMPLCSMPEGTVCSSIEAKIGDRGTFARCSGDYAVLISHDEDKGTSKIRL
PSGSKKTVSSDCRAMVGIVAGGGRTDKPMLKAGRAFHKYRVKRNEWPHVR
GVAMNPVEHPFGGGNHQHIGHPSTANRLASAGQKVGLIAARRTGRLRGIR
MEKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022669Ribosomal_L2_C
IPR002171Ribosomal_L2
IPR012340NA-bd_OB-fold
IPR014722Rib_L2_dom2
IPR014726Ribosomal_L2_dom3
IPR022666Rbsml_prot_L2_RNA-bd_dom
IPR022671Ribosomal_L2_CS
IPR008991Translation_prot_SH3-like_sf