mRNA_P-littoralis_Contig677.28.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: A0A6H5KMN1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN1_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 4.000e-151 Identity = 244/321 (76.01%), Postives = 264/321 (82.24%), Query Frame = 2
Query: 5 EERTLMNFKAHKGWVSAVRFLGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWDASKQHGGSPRLLCTVDDLHRTRKGIFSMDSHGTRVATGSKDTTVALGSLRPTGLERDRVLGDPNGCAGFHEKVVKGVSLRDENMVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPGAAPLHVFRGHCPYSLARPRAIHRPEFLLTAGAVAGGGAGSSGGGRVNIITCGERSEKLSMYDAGTGATVSRGVLGDEASALAVGVSGWSNAPSPGAVSIAAALPGGSVVLLEPVW 967
+ERTLMNFKAHKGWVSAVRFL GGGA AG+ GGCRLL+SANDSVV LWD SKQH GSPRLL T+DDLH TRKGIF+MDSHGTRVATGSKDTTVA+ SL PTG+E DRVLGDP G FHEKVVKGVSLRDEN VASCGDDSNVRVSDLRS +FGVS L+G H G HTVRWHPL++NLLL+AGLDSTV L+DLRR AAPLHVFRGHCPY+LARP+AIHRPEFL S GG RVNIITCGERSE +SMYDAG+G TVSRG+LGDEASALAVG++ WS SP A IAAALPGGSVVLLEPVW
Sbjct: 449 DERTLMNFKAHKGWVSAVRFLE------GGGAGAGV-GGCRLLTSANDSVVNLWDTSKQHRGSPRLLSTMDDLHPTRKGIFAMDSHGTRVATGSKDTTVAIASLGPTGIEHDRVLGDPGGSEAFHEKVVKGVSLRDENTVASCGDDSNVRVSDLRSSSSFGVSQRLDGVHGGRACHTVRWHPLDDNLLLSAGLDSTVNLYDLRRL-AAPLHVFRGHCPYALARPKAIHRPEFLP-----------SGGGDRVNIITCGERSENISMYDAGSGGTVSRGLLGDEASALAVGIADWSKG-SPEAAGIAAALPGGSVVLLEPVW 749
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: D7G8U5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U5_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 2.750e-148 Identity = 242/320 (75.62%), Postives = 263/320 (82.19%), Query Frame = 2
Query: 8 ERTLMNFKAHKGWVSAVRFLGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWDASKQHGGSPRLLCTVDDLHRTRKGIFSMDSHGTRVATGSKDTTVALGSLRPTGLERDRVLGDPNGCAGFHEKVVKGVSLRDENMVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPGAAPLHVFRGHCPYSLARPRAIHRPEFLLTAGAVAGGGAGSSGGGRVNIITCGERSEKLSMYDAGTGATVSRGVLGDEASALAVGVSGWSNAPSPGAVSIAAALPGGSVVLLEPVW 967
ERTLMNFKAHKGWVSAVRFL GGGA AG+ GGCRLL+SANDSVVKLWD SKQH G+PRLL T+DDLH TRKGIF+MDSHGTRVATGSKDTTVA+ SLRPTG+ERDRVLGDP G FHEKVVKGVSLRDEN VASCGDDSNVRVSDLRS + GVS L+G H G HTVRWHPL++N LL+AGLDSTV L+DLRR AAPLHVFRGHCPY+LARP+AIHRPEFL S GG VNIITCGERSE +SMYDAG+G TVSRG+LGDEASALAVG++ WS SP A IAAALPGG+VVLLEPVW
Sbjct: 573 ERTLMNFKAHKGWVSAVRFLE------GGGAGAGV-GGCRLLTSANDSVVKLWDTSKQHRGTPRLLSTMDDLHPTRKGIFAMDSHGTRVATGSKDTTVAIASLRPTGIERDRVLGDPGGSEAFHEKVVKGVSLRDENTVASCGDDSNVRVSDLRSSSSVGVSQRLDGVHGGRACHTVRWHPLDDNRLLSAGLDSTVNLYDLRRL-AAPLHVFRGHCPYALARPKAIHRPEFLP-----------SGGGNSVNIITCGERSENISMYDAGSGGTVSRGLLGDEASALAVGIADWSKG-SPEAAGIAAALPGGNVVLLEPVW 872
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: A0A835ZGB7_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGB7_9STRA) HSP 1 Score: 256 bits (654), Expect = 2.200e-73 Identity = 161/330 (48.79%), Postives = 201/330 (60.91%), Query Frame = 2
Query: 2 EEERTLMNFKAHKGWVSAVRFL----GAVGPGGGGGAAAGLFGG--CRLLSSANDSVVKLWDASKQHGGSPRLLCTVDDLHRTRKGIFSMDSHGTRVATGSKDTTVALGSL--RPTGLERDRVLGDPNGCAGFHEKVVKGVSLRDENMVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPGAAPLHVFRGHCPYSLARPRAIHRPEFLLTAGAVAGGGAGSSGGGRVNIITCGERSEKLSMYDAGTGATVSRGVLGDEASALAVGVSGWSNAPSPGAVSIAAALPGGSVVLLEPVW 967
+++ +LM F+AHKGWVSAV+F V GGG AG GG LLSS ND VVKLWD S+Q G+P L+ DLH KGIFSM H +AT SKD TVA+ L G+ DRVLGD H V+K V LRD VASCGDD++VRV D+R+ + ++ LE H A +HTVRWHP +E+LLLTAGLD+ V+L DLR+P AA + +RGH P++L R +AIHRPEF GGA +ITCGERS+ LSMYD TG +S+GV+G E S L+V + +AAA GG VVLL+PVW
Sbjct: 294 QQDASLMTFRAHKGWVSAVQFAERGGATVEVGGGRDVEAGGRGGRALLLLSSGNDGVVKLWDVSRQSKGTPLLVAQACDLHS--KGIFSMHMHRGVIATASKDRTVAISKLVGDGRGIALDRVLGDTET---LHAGVIKDVQLRDATTVASCGDDASVRVCDIRAARGYYIAVGLEDVHS-ACAHTVRWHPTDEHLLLTAGLDTVVKLFDLRKPNAAAVE-YRGHVPFALPRYKAIHRPEFY-------DGGAA--------VITCGERSDALSMYDTKTGTAISKGVVGSEMSTLSV--------HQGNSTMVAAAQNGGEVVLLKPVW 593
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: A0A388LV75_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LV75_CHABU) HSP 1 Score: 161 bits (407), Expect = 9.250e-38 Identity = 109/294 (37.07%), Postives = 157/294 (53.40%), Query Frame = 2
Query: 8 ERTLMNFKAHKGWVSAVRFLGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWDASKQ---------HGGSPRLLCTVDDLHRTRKGIFSMDSHGTRVATGSKDTTVALGSLRPT-GLERDRVLGDPNGCAGFHEKVVKGVSLRDENMVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPGAAPLHVFRGHCPYSLARPRAIHRPEFLLTAGAVAGGGAGSSGGGRVNIITCGERSEKLSMYDAGTGATVSRGVLGDEAS 859
E L+++K GW S +FL +F +L+S+ND + LWD +KQ HG SPR++ D++H +GIF+MD +VA+ SKD T+A+ S+ G ++RVL +G H ++GVS RDE ++A CG D V V DLR+ VS +EGAH A ++ V WHP +N+L++A LD + LHD+R A PL GH S++R R I+RP F S G G +++ GE+S+ LS+Y TG +SRG LG AS
Sbjct: 761 EGPLLSWKGSSGWASCTQFLSRQDQD------ESMF----VLTSSNDRTIVLWDINKQQVNHKGNSAHGSSPRVVVKTDEIHT--QGIFAMDEFDCKVASASKDRTLAISSVSSAKGFVKERVL------SGHHSGPIRGVSFRDEKILADCGGDGTVCVLDLRAPVPCAVS--IEGAHQSA-ANVVAWHPSMDNILMSASLDPHIYLHDIRST-AVPLFRLSGHINPSVSRCRQIYRPAFT------------SDGRG---VVSTGEKSQFLSLYSVDTGKAISRGHLGYSAS 1017
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: A0A7S4JBF1_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4JBF1_GUITH) HSP 1 Score: 97.4 bits (241), Expect = 1.420e-18 Identity = 83/297 (27.95%), Postives = 137/297 (46.13%), Query Frame = 2
Query: 8 ERTLMNFKAHKGWVSAVRFLGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWDASKQHGGSPRLLCT-VDDLHRTRKGIFSMDSHGTRVATGSKDTTVALGSLRPTGLERDRVLGDPNGCAGFHE-KVVKGVSLR-------DENMVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPGAAPLHVFRGH--CPYSLARPRAIHRPEFLLTAGAVAGGGAGSSGGGRVNIITCGERSEKLSMYDAGTGATVSRGVLGDEASAL 865
+ +L++++AH GW+ ++FL LL+++ND + +WD + R+L V L GIFS+ G + + KD + + + + L R L G HE +V+K V + + ++AS G+D ++VSDLRSR S +E A + V+W P NE LLL++ D+ +++ D RR LH GH P AR + +HR FL ++T GE+++ +S+YD +GA VSRG+ +A+
Sbjct: 16 DSSLISWRAHSGWIGEIQFLSYQQEDQN-----------LLLTASNDKAITVWDLNLSASSGKRMLPKQVASLAAHDGGIFSLHEVGGTIGSAGKDGNIVISQIVDSQLSSQRTL------VGLHEGQVIKCVRFQALHGMQAEGTILASSGNDYAIQVSDLRSR---SPSLRVESAARSCVNF-VQWSPTNEFLLLSSSFDADLKIWDTRRVDVC-LHSLVGHHLVPRE-ARVKGMHRASFLHEG---------------KYVVTTGEKTDVISIYDVSSGAAVSRGLAESAGTAI 274
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: W4G2M4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G2M4_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 7.310e-17 Identity = 77/241 (31.95%), Postives = 117/241 (48.55%), Query Frame = 2
Query: 17 LMNFKAHKGWVSAVRFLGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWDASKQHGGSPRLLCTVDDLHRTRKGIFSMDSH--GTRVATGSKDTTVALGSLRPTGLERDRVLGDPNGCAGFHEKVVKGV--SLRDENMVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPGAAPLHVFRGHCPYSLARPRAIHRPEFLLTAGAVAG 727
L++F+AH+GW S V F P R++++AND VKLW G L T +LH + GIFS+D +ATGSKD TVAL ++ + L+ R L H VVK V S + M+ASCG+D V+++DLR R + + ++G H A + +VRW P + +++ G D + + D+R+ P Y+ + + + EFL VAG
Sbjct: 347 LLSFRAHQGWCSGVNFN-LTSPAQ-----------TRMITAANDGFVKLWAVDPSTLGLALLGST--NLH-SNSGIFSLDVQTCDAVIATGSKDYTVALSAVTQSHLQLVRTLD-------HHTGVVKCVRFSATEPTMLASCGNDLTVQITDLRCRSSVAATCLVQGGHTRAVN-SVRWAPTCRHTVVSTGFDGKILVWDIRQHDRGP------SVTYATSEFKTMFPVEFLAPNQVVAG 558
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: A0A7S2W6M7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W6M7_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.400e-16 Identity = 68/210 (32.38%), Postives = 105/210 (50.00%), Query Frame = 2
Query: 239 GIFSMDSHGTRVATGSKDTTVALGSLRPTGLERDRVLGDPNGCAGFHEKVVKGVSLRDENMVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPGAAPLHVFRGHCPYSLA-RPRAIHRPEFLLTAGAVAGGGAGSSGGGRVNIITCGERSEKLSMYDAGTGATVSRGVLGDEASAL 865
GIFSM + G+ +ATGSKD++VA+ ++ P G L + H +VK V RD++ +AS G+D V V D+R++ L H A + +VRWHP N N LLTA + +RL D+R+ + F H +S A R ++I+ P+F+ + +T G+ + LS+YD G+ + R SAL
Sbjct: 1 GIFSMHTLGSCIATGSKDSSVAVSTICPDGS-----LSIIHKYEEDHASIVKSVRWRDQHTLASTGNDLTVNVFDMRTKK---TQAQLLDVHTMAVN-SVRWHPSNSNFLLTASFNPEIRLFDIRKTNTF-IREFNSH--HSAAKRCKSIYHPQFVDHG---------------FSFLTTGDDNNLLSLYDTNEGSILWRSCPNFHCSAL 183
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: A0A7S4L7F4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4L7F4_9EUKA) HSP 1 Score: 84.7 bits (208), Expect = 1.410e-15 Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 2
Query: 2 EEERT--LMNFKAHKGWVSAVRFLGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWDASKQ----HGGSPRLLCTVDDLHRTRKGIFSMDSHGTRVATGSKDTTVALGSLRPTGLERDRVLGDPNGCAGFHEKVVKGVSLRDENMVASCGDDS 445
EEE T ++++KAHKGWVS VRF+ +++ + +LL+S+ND V LWD +KQ G P+ LC +LH + GIFSMD ++ T SKD +V L SL G+ GC VVK + RD+ + S G+D+
Sbjct: 24 EEEETPPILSWKAHKGWVSTVRFI----------SSSSSY--SKLLTSSNDGCVTLWDVTKQTRNSRGVEPKKLCCNSNLHSS--GIFSMDVRNGKIITSSKDGSVVLSSLSDDGITSISSFTS-QGC------VVKSANFRDDFVFCSAGNDA 156
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: A0A6G0WYQ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYQ7_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.910e-14 Identity = 69/207 (33.33%), Postives = 106/207 (51.21%), Query Frame = 2
Query: 17 LMNFKAHKGWVSAVRF-LGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWDASKQHGGSPRLLCTVDDLHRTRKGIFSMD-SHGTRVATGSKDTTVALGSLRPTGLERDRVLGDPNGCAGFHEKVVKGVSLRDEN---MVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPG 622
L +F+AH+GW S V L + ++++AND++VKLWD + L+ T +H GIFS+D S G R+ATGSKD +VAL P+ + R+L N H+ VVK V + ++ASCG+D + + D R + LEG H A + ++RW P + + L++AG D + + D R+PG
Sbjct: 282 LASFRAHQGWCSGVSLQLSSTKT--------------LVVTAANDALVKLWDVDAANSALI-LVTTASTVHS--HGIFSLDVSQGNRLATGSKDHSVALSEATPSSI---RLLHRYN----HHDGVVKCVRFASHDASTLLASCGNDGAIVLQDTREGT---AAVRLEG-HSRAVN-SIRWFPNSSHALISAGFDGHIHVWDTRKPG 459
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Match: A0A830HER1_9CHLO (Uncharacterized protein n=2 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HER1_9CHLO) HSP 1 Score: 85.5 bits (210), Expect = 7.690e-14 Identity = 87/311 (27.97%), Postives = 125/311 (40.19%), Query Frame = 2
Query: 2 EEERTLMNFKAHKGWVSAVRFLGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWD----------------ASKQHGGSPRLLCTVDDLHRTRKGIFSMDSHGTR---VATGSKDTTVALGSLRPTGLERDRVLGDPNGCAGFHEKVVKGVSLRDENMVASCGDDSNVRVSDLRSRYNFGVSHSLEGAHDGAPSHTVRWHPLNENLLLTAGLDSTVRLHDLRRPGAAPLHVFR--GHCPYSLA--RPRAIHRPEFLLTAGAVAGGGAGSSGGGRVNIITCGERSEKLSMYDAGTGATVSRGVLGDEASAL 865
++E+ L+ +KAH GWVS VR L LL+S+ND V LW SK HGGS GIFSMD + AT +KD ++ + S + V N H V K V RD N++ S G+D +VR+ D+R G DG + + E+ +G V + D RR HV GHC + R ++++R + A +++ CG S LS+YD TGA +SRG LG +A+A+
Sbjct: 210 DKEQPLLYYKAHTGWVSEVRLLADS---------------KSLLTSSNDGAVSLWSLESVRADDSLTPERKMTSKVHGGS---------------GIFSMDIYEQNCAATATAAKDGSIMVSSFASSDYN---VTWQRNDA---HAGVAKSVRWRDANVMGSAGNDGSVRLWDVRMPETNDACADFAGMPDGGVVNFAEFG--GEHYCACSGFSREVAIWDTRR---LDQHVCTLVGHCGGTGVGQRIKSLYRAVYTPDA---------------KHVVVCGPGSASLSLYDGMTGACLSRGELGSDATAI 464 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig677.28.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig677.28.1 >prot_P-littoralis_Contig677.28.1 ID=prot_P-littoralis_Contig677.28.1|Name=mRNA_P-littoralis_Contig677.28.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=318bp MNFKAHKGWVSAVRFLGAVGPGGGGGAAAGLFGGCRLLSSANDSVVKLWDback to top mRNA from alignment at P-littoralis_Contig677:119943..125610- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig677.28.1 ID=mRNA_P-littoralis_Contig677.28.1|Name=mRNA_P-littoralis_Contig677.28.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5668bp|location=Sequence derived from alignment at P-littoralis_Contig677:119943..125610- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig677:119943..125610- >mRNA_P-littoralis_Contig677.28.1 ID=mRNA_P-littoralis_Contig677.28.1|Name=mRNA_P-littoralis_Contig677.28.1|organism=Pylaiella littoralis U1_48|type=CDS|length=954bp|location=Sequence derived from alignment at P-littoralis_Contig677:119943..125610- (Pylaiella littoralis U1_48)back to top |