mRNA_P-littoralis_Contig677.10.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig677.10.1
Unique NamemRNA_P-littoralis_Contig677.10.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: D7G8U9_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8U9_ECTSI)

HSP 1 Score: 588 bits (1517), Expect = 2.030e-191
Identity = 362/617 (58.67%), Postives = 407/617 (65.96%), Query Frame = 1
Query:    1 VNGCRQRFLTKFLQVRLVELKKTLESRLEKLDAEAIEIEVKVRYNTRILRQTERELIPLGKGTVEKVKLLRTARLRKKVRSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLFE--SRGSATNKSVTGNFSRLSGGNXXXXXXXXXVASISDRFRQRLVELTGEATLAAEEEEKFLRYVAANIATITAAAYNDVETDNSSSGYRVEADADGTDKALAFAAAREWTFVGTDKRL-LSSPGAATKHKCWYHAGTSEYFWGDNPPLLGLLLHCGDGASQKESNARPPIGSDGRGGS--DHS-FGDSGGVVGEVVGGDLLAAGATGTLHPVLGLIFSDRASGEAWLKTQDLGPLLANSVRVCDIGPAGWCQLRAAVPSHCTCAGGRGNCDCPVYAAGCTGPATMSTVTEDSAAVLAAGRSRTVDGNPTT---LPD---DGDSSVSLTFFTFFHHAETGGVRWCLSPRSALLATPRTSRREASCARQLSAAAAYEHVERHQEHGSGWDGPERTENEL-----DQPGGVAPDGGKVALADDTSGDLSGNGRDDWEVVEDGDMVFYYNKRLGVSTWEPPPGWGTSDTQESYGAGG 1800
            +NGCRQRFLTKFLQVRLVELK  +E RLEKLDAE IEIEVK R+NTR+LRQTERELIPLGKGTVEKVKLLRTARLRKK RSE+SG+ITIQRI+RGWRVR AINSWYRDYW+ESED ATGDVYYVNTWNQEIRW+KPLEISLFE  S G ATN+  T N S+ S  +         V ++S RFR+RLVELTGEAT AAEEEE+FLR+V ANIATI+A +Y+ +   N      VE+ AD T   LA AAAREW FV TD R  L SPG  TK+KCWY A TSEYFWG NPPLLGLL    +     E N     G  G GGS   HS  G+ G   G    G   +      +HP LGL+F DRASGEAWLKTQDLG LL  S +VCDIG AGWCQL+AAVP+    A    +       + C    T+   + DS        +  VDG  T    +PD    G SS S   FTFFHHA+ G  RWCLSPRSALLATPRT RREAS AR L+AA A            GWD    +EN       D+    A D G  AL    S D SG+G   WEVVED DMVFYYN+RLG+STWEPPPGW    +Q  YGAGG
Sbjct:  949 INGCRQRFLTKFLQVRLVELKANVEERLEKLDAETIEIEVKERHNTRVLRQTERELIPLGKGTVEKVKLLRTARLRKKARSERSGSITIQRIFRGWRVRRAINSWYRDYWIESEDAATGDVYYVNTWNQEIRWVKPLEISLFEESSGGGATNRPGTANSSKDSDADEELG-----VDTVSSRFRKRLVELTGEATRAAEEEERFLRHVVANIATISA-SYS-ITKSNGGDEKGVESAADQT--LLALAAAREWGFVSTDSRFSLPSPGT-TKNKCWYRAKTSEYFWGGNPPLLGLLPCFPENMGSNEGNPGSFAGGSGGGGSVGTHSTLGNEGVAAGGTAEGGAGSPDGVAVVHPELGLVFVDRASGEAWLKTQDLGLLLNRSEKVCDIGRAGWCQLKAAVPTEAAFAAVAEDGFVRGGGSACKEGGTVKGPSGDSPRAATPAAAAEVDGTATAGEVVPDASRSGGSSTSRPLFTFFHHAQMGEARWCLSPRSALLATPRTPRREASQAR-LAAAGA-----------QGWD----SENTSGVGGNDEQSFAATDLGASALTTGHSNDESGDG---WEVVEDADMVFYYNQRLGISTWEPPPGWAQGGSQGIYGAGG 1536          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: A0A6H5KKL6_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL6_9PHAE)

HSP 1 Score: 555 bits (1429), Expect = 1.650e-179
Identity = 349/622 (56.11%), Postives = 385/622 (61.90%), Query Frame = 1
Query:    1 VNGCRQRFLTKFLQVRLVELKKTLESRLEKLDAEAIEIEVKVRYNTRILRQTERELIPLGKGTVEKVKLLRTARLRKKV--------------------RSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLFE-SRGSATNKSVTGNFSRLSGGNXXXXXXXXXVASISDRFRQRLVELTGEATLAAEEEEKFLRYVAANIATITAAAYNDVETDNSSSGYRVEADADGTDKALAFAAAREWTFVGTDKRL-LSSPGAATKHKCWYHAGTSEYFWGDNPPLLGLLLHCGDGASQKESNARPPIGSDGRGGS--DHS-FGDSGGVVGEVVGGDLLAAGATGTLHPVLGLIFSDRASGEAWLKTQDLGPLLANSVRVCDIGPAGWCQLRAAVPSHCTCAGGRGNCDCPVYAAGCT--------GPATMSTVTEDSAAVLAAGRSRTVDGNPTTLPDDGDSSVSLTFFTFFHHAETGGVRWCLSPRSALLATPRTSRREASCARQLSAAAAYEHVERHQEHGSGWDGPERTENELDQPGGVAPDGGKVALADDTSGDLSGNGR--DDWEVVEDGDMVFYYNKRLGVSTWEPPPGW 1761
            VNGCRQRFLTKFLQVRLVELK  +E RLEKLDAEAIEIEVK R+NTR+LRQTERELIPLGKGTVEKVKLLRTARLRKKV                    RSE+SG+ITIQRI+RGWRVR AINSWYRDYW+ESED ATGDVYYVNTWNQEIRW+KPLEISLFE S G ATN+  T N S+ S            V ++S RFR+RLVELTGEAT AAEEEE+FLR+V ANIATI+A +Y   +   S  G    A++      LA AAAREW FV TD R  L SPG  TK+KCWY   TS+YFWG NPPLLGLL    +     E N     G  G GGS   HS  G+ G V G    G      A   +HP LGL+F DRASGEAWLKTQDLG LL  S +VCDIG AGWCQL+AAVPS    A      D  V  AG T        GP  +      +A     G + T  G          SS     FTFFHHA+ G  RWCLSPRSALLATPRT RREAS AR  SA A             GWD    +EN     G          L       +  NG   D WEVVEDGDMVFYYN+RL +STWEPPPGW
Sbjct:  828 VNGCRQRFLTKFLQVRLVELKANVEERLEKLDAEAIEIEVKERHNTRVLRQTERELIPLGKGTVEKVKLLRTARLRKKVSDSIAFASTDIALGNEHTTARSERSGSITIQRIFRGWRVRRAINSWYRDYWIESEDAATGDVYYVNTWNQEIRWVKPLEISLFEESSGGATNRPGTANPSKDS-----DAGEELGVDTVSSRFRKRLVELTGEATRAAEEEERFLRHVVANIATISA-SYGIAK---SKGGDEKGAESAADQTLLALAAAREWRFVSTDSRFSLPSPGT-TKNKCWYREKTSDYFWGGNPPLLGLLPFFPENVESHEGNPGSSAGRSGGGGSVGTHSTLGNEGVVAGGTAEGGAGPPDAVAVVHPELGLVFVDRASGEAWLKTQDLGLLLKRSEKVCDIGRAGWCQLKAAVPSETAFAAVAE--DGIVRGAGSTSKKGGTVKGPLGVIPRAATAATTAEVGGAATAGGAVPDASRSAGSSTPRPLFTFFHHAQLGEARWCLSPRSALLATPRTPRREASHARLASAGA------------QGWD----SENTSGVGGNDEHSFAATGLGASAFTTVHSNGESGDGWEVVEDGDMVFYYNERLRISTWEPPPGW 1421          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: A0A836CGM1_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGM1_9STRA)

HSP 1 Score: 157 bits (397), Expect = 1.270e-36
Identity = 83/152 (54.61%), Postives = 109/152 (71.71%), Query Frame = 1
Query:    1 VNGCRQRFLTKFLQVRLVELKKTLESRLEKLDAEAIEIEVKVRYNTRILRQTERELIPLGKGTVEKVKLLRTARLRKKVRSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLFESRGSATNKS 456
            ++G  QRFLTKFLQVRL EL+   +++L+ L+    +   KVR+  R+LRQ  +EL  +G G  +KV+L R+ R+R++VR+E+  A TIQR +RGWRVR A+ SW RDYWV  ED ATGD+YY NTW+QE RW KPLEISLFE R  A  +S
Sbjct:  935 LSGVPQRFLTKFLQVRLQELRAASDAKLKALEHSCEQQAKKVRHTQRLLRQVRKELNAIGGGAADKVRLERSNRIRRRVRAERGAATTIQRHFRGWRVRRAVWSWCRDYWVAQEDPATGDMYYYNTWSQEARWTKPLEISLFE-RAPAQRRS 1085          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: A0A7S2RT07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT07_9STRA)

HSP 1 Score: 125 bits (314), Expect = 7.750e-29
Identity = 65/141 (46.10%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    1 VNGCRQRFLTKFLQVRLVELKKTLESRLEKLDAEAIEIEVKVRYNTRILRQTERELIPLGKGTVEKVKLLRTARLRKKVRSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISL 423
            + G  QRFLT++L+VR+ E     E+++ +      E+ V+ R   R++RQ  REL PL +G   K K  R  RLR +VR EK  + TIQR +RG R+R A+ SWYRDYW E  D+ TGD Y+ NTW++E+RW +PLE++L
Sbjct:   72 ITGTPQRFLTEYLKVRMAEQLAEKEAQIAQDKDRYNELVVQARQRERMIRQVRRELEPLTRGMAVKTKRDRIVRLRNRVRLEKWASTTIQRHFRGHRLRQALFSWYRDYWTEVNDDTTGDTYFYNTWSEEVRWTRPLEMTL 212          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: A0A7S1XR48_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XR48_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.860e-15
Identity = 36/65 (55.38%), Postives = 52/65 (80.00%), Query Frame = 1
Query:  235 VRSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLFE 429
            VRSE +GA+ +QR++RG R R+AI +W RDYWV  ED+ATGD+YY N+W++E+ W KPL+++  E
Sbjct:    1 VRSEHAGAVGMQRVFRGHRARSAIFAWTRDYWVPMEDDATGDLYYYNSWSEEVMWYKPLQMTYSE 65          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: A0A1V9ZDB6_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZDB6_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 3.290e-15
Identity = 57/145 (39.31%), Postives = 87/145 (60.00%), Query Frame = 1
Query:    1 VNGCRQRFLTKFLQVRLVELKKTLESRLEKLDAEAIEIEVKV---RYNTRILRQTERELIPLGKGTVEKVKLLRTARLRKKVRSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLF 426
            + G +QR+LT++LQ +L +    L+ +   +  E   +EV V     + + LR  +REL PL +G   K K  RT RL+ KVR+E+ GAI +QR++RG+RVRAA+       W+E  D A   +YY N W+QE R ++PL + +F
Sbjct:  848 ITGAKQRYLTRYLQTQLAD---QLQKKRMLVAVETRNLEVAVAELNESEKQLRFAKRELQPLTEGVERKTKANRTNRLQLKVRAERKGAIALQRLFRGYRVRAAVCEG-SSRWIELYDPALDVLYYYNAWSQEKRRVRPLAMDIF 988          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: T0R536_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R536_SAPDV)

HSP 1 Score: 89.7 bits (221), Expect = 7.700e-15
Identity = 59/149 (39.60%), Postives = 92/149 (61.74%), Query Frame = 1
Query:    1 VNGCRQRFLTKFLQVRLVE-LKK-----TLESR-LEKLDAEAIEIEVKVRYNTRILRQTERELIPLGKGTVEKVKLLRTARLRKKVRSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLF 426
            + G +QR+LT++LQ +L + L+K      +ESR LE   AE  E E ++R+        +REL PL +G   K K  R +RL+ +VR+++ GAI +QR++RG+RVRAA+     + W+E  D     +YYVN W+QE R ++PL + +F
Sbjct:  877 ITGAKQRYLTRYLQAQLADQLQKKRMLVAVESRNLELAVAELNESEKQLRF-------AKRELQPLTEGVERKTKASRVSRLQHQVRAQRGGAIALQRLFRGYRVRAAVAEG-SNRWIELYDPVLERLYYVNAWSQETRRVRPLAMGIF 1017          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: A0A7S2FNT3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FNT3_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 8.130e-15
Identity = 34/53 (64.15%), Postives = 44/53 (83.02%), Query Frame = 1
Query:  265 IQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISL 423
            IQR +RG R+R A+ SWYRDYW+E  DE TGDVY+ NTW++E+RW KPLE++L
Sbjct:    3 IQRCFRGMRLRGALFSWYRDYWIEVVDETTGDVYFYNTWSEEVRWAKPLEMTL 55          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: A0A1V9Z6R7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6R7_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.770e-14
Identity = 55/145 (37.93%), Postives = 90/145 (62.07%), Query Frame = 1
Query:    1 VNGCRQRFLTKFLQVRLVEL--KKTLESRLEKLDAEAIEIEV-KVRYNTRILRQTERELIPLGKGTVEKVKLLRTARLRKKVRSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLF 426
            + G +QR+LT++LQ +L +   KK +   L  ++   +EI V ++  + + LR   REL PL +G   K +  R ARL+ +VR+++ GA+ +QRI+RG+RVRAAI     + W+E  D    ++YY N W+QE R ++PL + +F
Sbjct:  885 ITGAKQRYLTRYLQAQLADQLQKKRM---LVAVETRNLEIAVAELNESEKQLRFARRELQPLTEGVERKTRAGRVARLQTQVRAQRKGAVALQRIFRGYRVRAAIAEG-SNRWLELLDPVRDELYYYNAWSQETRRVRPLAMGIF 1025          
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Match: A0A8K1FG11_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FG11_PYTOL)

HSP 1 Score: 82.8 bits (203), Expect = 1.140e-12
Identity = 53/143 (37.06%), Postives = 81/143 (56.64%), Query Frame = 1
Query:    1 VNGCRQRFLTKFLQVRLVELKKTLESRLEKLDAEAIEIEVKVRYNTRILRQTERELIPLGKGTVEKVKLLRTARLRKKVRSEKSGAITIQRIYRGWRVRAAINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLFE 429
            + G  QR+LT++LQV+L +  +     L   +     +  +     + LR  +REL PL  G V K +  RT  L+ +VR E+  A TIQR++RG+RVR+A+     + W+E   +  G VYY NT+  E RW KPL +S+F+
Sbjct:  862 ITGTPQRYLTQYLQVQLADRLRAKRMELAMANRALETLLTQFNDAQKQLRAVKRELEPLTDGVVRKTRENRTTHLQVQVRRERVAATTIQRVFRGYRVRSAVREG-ANCWIEGVTD--GRVYYYNTFTGESRWNKPLAMSIFQ 1001          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig677.10.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7G8U9_ECTSI2.030e-19158.67Hypothetical leucine rich repeat calmodulin bindin... [more]
A0A6H5KKL6_9PHAE1.650e-17956.11WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CGM1_9STRA1.270e-3654.61WW domain-containing protein n=1 Tax=Tribonema min... [more]
A0A7S2RT07_9STRA7.750e-2946.10Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1XR48_9STRA1.860e-1555.38Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1V9ZDB6_9STRA3.290e-1539.31Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
T0R536_SAPDV7.700e-1539.60Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A7S2FNT3_9STRA8.130e-1564.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A1V9Z6R7_9STRA1.770e-1437.93Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8K1FG11_PYTOL1.140e-1237.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig677contigP-littoralis_Contig677:60195..63788 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G8U9
PFAMsIQ,LRR_6
Model size1803
Max annot lvl2759|Eukaryota
KEGG koko:K10268
Hectar predicted targeting categoryother localisation
Exons5
Evalue3.34e-192
EggNOG OGsKOG1947@1|root,KOG1947@2759|Eukaryota
Ec32 ortholog descriptionHypothetical leucine rich repeat calmodulin binding protein
Ec32 orthologEc-15_004330.1
DescriptionF-box LRR-repeat protein
Cds size1803
COG categoryB
BRITEko00000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791407.1148877-CDS-P-littoralis_Contig677:60194..603111680791407.1148877-CDS-P-littoralis_Contig677:60194..60311Pylaiella littoralis U1_48CDSP-littoralis_Contig677 60195..60311 +
1680791407.1318004-CDS-P-littoralis_Contig677:60788..609051680791407.1318004-CDS-P-littoralis_Contig677:60788..60905Pylaiella littoralis U1_48CDSP-littoralis_Contig677 60789..60905 +
1680791407.1423392-CDS-P-littoralis_Contig677:61435..615431680791407.1423392-CDS-P-littoralis_Contig677:61435..61543Pylaiella littoralis U1_48CDSP-littoralis_Contig677 61436..61543 +
1680791407.1559665-CDS-P-littoralis_Contig677:62174..631531680791407.1559665-CDS-P-littoralis_Contig677:62174..63153Pylaiella littoralis U1_48CDSP-littoralis_Contig677 62175..63153 +
1680791407.1722078-CDS-P-littoralis_Contig677:63306..637881680791407.1722078-CDS-P-littoralis_Contig677:63306..63788Pylaiella littoralis U1_48CDSP-littoralis_Contig677 63307..63788 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig677.10.1prot_P-littoralis_Contig677.10.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig677 60195..63788 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig677.10.1

>prot_P-littoralis_Contig677.10.1 ID=prot_P-littoralis_Contig677.10.1|Name=mRNA_P-littoralis_Contig677.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=601bp
VNGCRQRFLTKFLQVRLVELKKTLESRLEKLDAEAIEIEVKVRYNTRILR
QTERELIPLGKGTVEKVKLLRTARLRKKVRSEKSGAITIQRIYRGWRVRA
AINSWYRDYWVESEDEATGDVYYVNTWNQEIRWIKPLEISLFESRGSATN
KSVTGNFSRLSGGNDDDNDDGGGVASISDRFRQRLVELTGEATLAAEEEE
KFLRYVAANIATITAAAYNDVETDNSSSGYRVEADADGTDKALAFAAARE
WTFVGTDKRLLSSPGAATKHKCWYHAGTSEYFWGDNPPLLGLLLHCGDGA
SQKESNARPPIGSDGRGGSDHSFGDSGGVVGEVVGGDLLAAGATGTLHPV
LGLIFSDRASGEAWLKTQDLGPLLANSVRVCDIGPAGWCQLRAAVPSHCT
CAGGRGNCDCPVYAAGCTGPATMSTVTEDSAAVLAAGRSRTVDGNPTTLP
DDGDSSVSLTFFTFFHHAETGGVRWCLSPRSALLATPRTSRREASCARQL
SAAAAYEHVERHQEHGSGWDGPERTENELDQPGGVAPDGGKVALADDTSG
DLSGNGRDDWEVVEDGDMVFYYNKRLGVSTWEPPPGWGTSDTQESYGAGG
*
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mRNA from alignment at P-littoralis_Contig677:60195..63788+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig677.10.1 ID=mRNA_P-littoralis_Contig677.10.1|Name=mRNA_P-littoralis_Contig677.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3594bp|location=Sequence derived from alignment at P-littoralis_Contig677:60195..63788+ (Pylaiella littoralis U1_48)
GTGAACGGGTGCCGGCAGCGTTTCCTGACCAAGTTCTTGCAAGTGCGTCT GGTAGAATTGAAGAAAACCTTGGAGAGTCGCCTTGAAAAGCTCGACGCCG AAGCGATCGAGATTGAGGTAAGTCGCCAGTGGGAGGAACAAGAAGGGTTT CAAGAATATCACTGGCCAGGTCGATAAGTATTCCATCAGCTTACGTTTCT GTTAGTTGCCGCATCAATGTCACCAGTGACATCATTGCACACCGAGGTAA ATATAAATATTACTTCATGTCTCCCAATTCCATCTCGATTTTCAAGCATC TACGTCAGCGTTTTCACGGCTTCTCACAATTTCGGGGCGTCCTTGTAGTC AAACAACGGATCCTCCTCTTTGTTAGTGCCCAATTCGTGAAGAATGGATG CGAGACAAAAGGGATTTTGCTATGACTTCGGTGCTGCAGCCAAGCGCAAT CCCATGGACCTGTGTGTGCGTGTAAGCGTGTCTGGTTCGACGCTGAAGTA CATCAGTCTAAACGTGATTGTACCACGTGCCACCCAACACTCCTTTATTT TCTCTTGCACCGACGGCTACCCCCTGGGGTGCTGTGCCGTACAGGTGAAG GTACGGTACAATACCCGGATTCTGCGACAGACGGAGAGGGAGCTCATACC GCTGGGCAAGGGCACGGTGGAGAAAGTCAAGCTTCTCCGCACAGCCAGAC TACGAAAAAAGGTGGGTGGCTTTCGTGAAGCCTCCCCTGGGCATTAAACC CCCTCAAGTGGTTGAGAGCCGTTAGAAGTTGTTTTTCAAAATAATAAACG CAGTCCAAACCATTTTTCGAGTGTGTGTGTACACCACCCGCATTGTTCCA AATATCACATTTTCCCCAAGACAAAAACCTACCTGGTGTGTTGCTTCCAC TCTCCTTCAATTTTCGGCAGAGTTAGTCGATCTCCACAGACGAGTTTTGT CCCAATGTTGGCTACGTGTTGCACCCACAGACCTCGAAACAGAATGTTGG TAATACCTGTTTCCACCACACGAGAACCGGTTCTAACTGCAGACCATCTT TGTCAGATACCGACTGTCCTGTCCGAATATAGATCACCACACATATGGCT GTAAAACTATGTGCAATCCACCAAAACACCAACGACGTCAACCAAAACCA CGTTGCGACGCCAAGCATCACACCATCACGGCACAGGATTTAACACAACC GCCCCCACAACGGCAACAACAACACGACCGCTTACTTCCAGGTACGGTCT GAGAAGAGCGGAGCGATCACCATTCAGAGGATTTACCGAGGTTGGAGAGT AAGGGCGGCCATCAACTCTTGGTACAGGGACTACTGGGTCGAATCCGAGG TGAAAATACAACAAGAAATCGACAAATGAACAACCAAGATTCCTTCTGAG CTGTTTCGAATAAATGCCCCCGCGGTACGTTTTGAAACACCGTACTGCAA ACAGAACGCTTCTCAAGGCTTCTGTTGAGTTGAGCAAGCAGAGGTTCTAG TAATAACGATTGGAAGATACGCCAATATGTATACGAGACAATCGTAATGC GCCCCCTTATTCGAAACTTGCAATCGGCACCGACAGTTATGCGTTGTGGC TTGGGCACCGTGAGTTTCATTGTGCTTCAAAAGCGAAAGTTCAGGGCGAG CGCCATAATTTACGCCACCTACCTCTGTGTTGTGCATGCAGCCTACAGAT CGTCGCCGGAACGGTGTGCTTGGCCTCGTCGAGTTTCCTATGGTAGACCA TAAAAATATTTTGGAGTGAAAACATATGTCCCAAACGGAATGTTTAAGGT AAGTAATACTGGTTTGTTGACAAGGTTTCAGCAAGTAACAAACAAATATG AACAACACAGGAGAATCGTAAGGCCCTTAGGTTAACGCAATAAACTCAGC GCCTCGATACCTCACCCGCTTATTTCAACGCATTTGACGTACCGGCCGTG CCGTCCTAATCGATGCAAACGACCAACTAGGACGAAGCAACGGGCGATGT GTACTACGTCAACACCTGGAACCAGGAAATTCGCTGGATTAAACCTCTGG AAATTTCTCTGTTCGAGAGTAGAGGCAGCGCCACGAACAAGTCGGTCACT GGCAACTTCTCGAGACTCTCTGGGGGAAACGATGACGATAACGATGACGG CGGCGGTGTAGCCAGCATCAGCGATAGGTTCCGGCAGCGCTTGGTTGAGC TTACGGGAGAGGCCACACTCGCCGCAGAGGAAGAGGAAAAGTTCCTCCGG TATGTGGCCGCTAACATCGCCACAATCACAGCCGCCGCGTACAACGATGT CGAAACAGATAACAGCAGCAGCGGGTACAGGGTAGAGGCCGACGCCGACG GCACCGACAAAGCGCTTGCCTTCGCCGCGGCGAGAGAGTGGACGTTCGTG GGCACGGACAAGCGGTTGTTGTCATCTCCTGGCGCCGCCACGAAACACAA GTGCTGGTACCACGCCGGTACATCAGAATACTTCTGGGGAGACAATCCAC CGCTGCTGGGACTACTTCTCCATTGCGGGGATGGTGCTTCGCAGAAGGAG AGCAACGCACGGCCCCCTATTGGTTCCGATGGCCGTGGCGGCAGCGATCA TAGTTTCGGAGACAGCGGCGGTGTTGTCGGGGAAGTTGTGGGCGGTGATC TTCTTGCGGCCGGAGCGACCGGAACGCTTCACCCGGTCTTGGGACTAATT TTCTCCGACCGCGCTTCCGGAGAAGCTTGGCTGAAGACTCAGGACTTAGG CCCGCTCCTGGCGAACTCGGTGAGGGTGTGCGATATTGGCCCGGCGGGAT GGTGCCAGTTGAGGGCGGCGGTCCCTTCCCATTGTACATGTGCCGGGGGG CGTGGTAACTGTGATTGTCCGGTTTACGCAGCAGGTTGTACTGGACCAGC CACCATGTCGACTGTGACCGAAGACAGCGCAGCAGTCTTAGCGGCGGGAA GGAGCCGCAGTGGCATCGGCATTCGCGGGGTTGGAAGCAACAGCAGCGGA GAATGCGAAAACGACGAACCTGGTCGGGATGATCGGATGGCGAAAACTGC CACCACTACCGCCGCTGCCGCCGCCGCGAAAGTGGGCGAGAGAGAGTCAA CGGCGGTGATAGCGGTAGATGGAAACCCCACCACCTTGCCTGATGACGGT GACTCATCTGTGTCCCTAACGTTCTTCACGTTTTTCCACCATGCCGAAAC GGGGGGAGTACGGTGGTGTCTGTCCCCACGGTCGGCACTATTGGCAACAC CACGCACTTCGCGCAGGGAGGCCTCGTGCGCTCGACAACTATCAGCCGCC GCTGCGTACGAGCACGTCGAACGACACCAGGAGCATGGCTCGGGATGGGA CGGCCCTGAAAGAACCGAGAATGAACTGGACCAACCAGGAGGTGTAGCCC CCGATGGTGGAAAGGTGGCCTTAGCGGATGATACTAGCGGTGATTTGTCG GGGAACGGCAGGGATGACTGGGAAGTGGTGGAGGACGGGGATATGGTGTT CTACTACAACAAGAGGCTCGGGGTGAGCACGTGGGAGCCCCCGCCAGGGT GGGGAACGAGTGATACTCAAGAATCGTACGGAGCTGGTGGGTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig677:60195..63788+

>mRNA_P-littoralis_Contig677.10.1 ID=mRNA_P-littoralis_Contig677.10.1|Name=mRNA_P-littoralis_Contig677.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1803bp|location=Sequence derived from alignment at P-littoralis_Contig677:60195..63788+ (Pylaiella littoralis U1_48)
GTGAACGGGTGCCGGCAGCGTTTCCTGACCAAGTTCTTGCAAGTGCGTCT
GGTAGAATTGAAGAAAACCTTGGAGAGTCGCCTTGAAAAGCTCGACGCCG
AAGCGATCGAGATTGAGGTGAAGGTACGGTACAATACCCGGATTCTGCGA
CAGACGGAGAGGGAGCTCATACCGCTGGGCAAGGGCACGGTGGAGAAAGT
CAAGCTTCTCCGCACAGCCAGACTACGAAAAAAGGTACGGTCTGAGAAGA
GCGGAGCGATCACCATTCAGAGGATTTACCGAGGTTGGAGAGTAAGGGCG
GCCATCAACTCTTGGTACAGGGACTACTGGGTCGAATCCGAGGACGAAGC
AACGGGCGATGTGTACTACGTCAACACCTGGAACCAGGAAATTCGCTGGA
TTAAACCTCTGGAAATTTCTCTGTTCGAGAGTAGAGGCAGCGCCACGAAC
AAGTCGGTCACTGGCAACTTCTCGAGACTCTCTGGGGGAAACGATGACGA
TAACGATGACGGCGGCGGTGTAGCCAGCATCAGCGATAGGTTCCGGCAGC
GCTTGGTTGAGCTTACGGGAGAGGCCACACTCGCCGCAGAGGAAGAGGAA
AAGTTCCTCCGGTATGTGGCCGCTAACATCGCCACAATCACAGCCGCCGC
GTACAACGATGTCGAAACAGATAACAGCAGCAGCGGGTACAGGGTAGAGG
CCGACGCCGACGGCACCGACAAAGCGCTTGCCTTCGCCGCGGCGAGAGAG
TGGACGTTCGTGGGCACGGACAAGCGGTTGTTGTCATCTCCTGGCGCCGC
CACGAAACACAAGTGCTGGTACCACGCCGGTACATCAGAATACTTCTGGG
GAGACAATCCACCGCTGCTGGGACTACTTCTCCATTGCGGGGATGGTGCT
TCGCAGAAGGAGAGCAACGCACGGCCCCCTATTGGTTCCGATGGCCGTGG
CGGCAGCGATCATAGTTTCGGAGACAGCGGCGGTGTTGTCGGGGAAGTTG
TGGGCGGTGATCTTCTTGCGGCCGGAGCGACCGGAACGCTTCACCCGGTC
TTGGGACTAATTTTCTCCGACCGCGCTTCCGGAGAAGCTTGGCTGAAGAC
TCAGGACTTAGGCCCGCTCCTGGCGAACTCGGTGAGGGTGTGCGATATTG
GCCCGGCGGGATGGTGCCAGTTGAGGGCGGCGGTCCCTTCCCATTGTACA
TGTGCCGGGGGGCGTGGTAACTGTGATTGTCCGGTTTACGCAGCAGGTTG
TACTGGACCAGCCACCATGTCGACTGTGACCGAAGACAGCGCAGCAGTCT
TAGCGGCGGGAAGGAGCCGCACGGTAGATGGAAACCCCACCACCTTGCCT
GATGACGGTGACTCATCTGTGTCCCTAACGTTCTTCACGTTTTTCCACCA
TGCCGAAACGGGGGGAGTACGGTGGTGTCTGTCCCCACGGTCGGCACTAT
TGGCAACACCACGCACTTCGCGCAGGGAGGCCTCGTGCGCTCGACAACTA
TCAGCCGCCGCTGCGTACGAGCACGTCGAACGACACCAGGAGCATGGCTC
GGGATGGGACGGCCCTGAAAGAACCGAGAATGAACTGGACCAACCAGGAG
GTGTAGCCCCCGATGGTGGAAAGGTGGCCTTAGCGGATGATACTAGCGGT
GATTTGTCGGGGAACGGCAGGGATGACTGGGAAGTGGTGGAGGACGGGGA
TATGGTGTTCTACTACAACAAGAGGCTCGGGGTGAGCACGTGGGAGCCCC
CGCCAGGGTGGGGAACGAGTGATACTCAAGAATCGTACGGAGCTGGTGGG
TAA
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