mRNA_P-littoralis_Contig117.91.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI) HSP 1 Score: 716 bits (1848), Expect = 1.580e-241 Identity = 369/493 (74.85%), Postives = 402/493 (81.54%), Query Frame = 2
Query: 179 MSRLRGDDELLDLLDIMGGHHGDEKQAAGLDCSNSSSLNATTP------TGAHQPSASDEVACVPETGWNRSIWNPHTFEE-------GNAGAIGETAVRFVPPQEEVLRQQAVALVFSRFQVLGKELGVRLKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGSLPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKALTFVVIVPCWEDSAGWKRLRDSVFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAARQQQAEGTLEHACRELERAFDLRQEGDGS 1618
M+R+RGDDELL+LL IMGG +G++ +ATTP T H A+ E ACVPETGWN SIWNPH FE G A GE R V PQEEVLRQQAVA+VFSRFQVLGKELG+R+KNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAEL+ LGV+K+QSRNLCCELGRASK+ALKTLKKQLRGVV G P+ S +K V A++LD +TYVLQLGKNKLRMNSAHYDKMKELF R+ +G R S+S H PPAWIGDFHD LF+CLMRYEALQGGGFQASMGGDAFDVLL+ FGA+MECFASPFNCRYSRYCSAF DTD PFGS GSFFDF+PT+GAYEANPPFVRDVILKMANHMD LL+AT+KALTFVVI+PCWEDSAGWKRLRDS FLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQT AR+QQ+ TL ACRELERAF LRQEGDGS
Sbjct: 1 MTRVRGDDELLELLGIMGGDNGEQ--------------DATTPAETSRDTRTHPAPAAGEFACVPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRFQVLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNG--PAAAVSAPSKRVAARKLDGNTYVLQLGKNKLRMNSAHYDKMKELFSRSRVEGAA----RRQSSSTEHP---PPAWIGDFHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWEDSAGWKRLRDSAFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQEGDGS 470
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: A0A6H5LQ06_9PHAE (PCIF1_WW domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ06_9PHAE) HSP 1 Score: 392 bits (1006), Expect = 1.050e-118 Identity = 243/512 (47.46%), Postives = 272/512 (53.12%), Query Frame = 2
Query: 179 MSRLRGDDELLDLLDIMGGHHGDEKQAAGLDCSNSSSLNATTPTGAHQPSASDEVACVPETGWNRSIWNPHTFEE-------GNAGAIGETAVRFVPPQEEVLRQQAVALVFSRFQ--------------------------------------------------------------------------------------------------------------VLGKELGVRLKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGSLPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVG--------------SFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEAT 1321
M+R+RGD+ELL+LL IMGG +G++ + S T H A+ E ACVPETGWN SIWNPH FE G A GE R V PQEEVLRQQAVA+VFSRFQ VLGKELG+R+KNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAEL+ LGV+K+QSRNLCCELGRASK+ALKTLKKQ+ + ++L RMNSAHYDKMKELF R+ +G R S+S H PPAWIGDFHD LF+CLMRYEALQ ASMGGDAFDVLL+ FGA+MECFASPFNCRYSRYCSAF DTD PFG G SF PTEGAY+ANPPFVRDVILKMA HMD LL+ +
Sbjct: 1 MTRVRGDNELLELLGIMGGDNGEQDAKTPAETSRD--------TRTHPAPAAGEFACVPETGWNSSIWNPHVFEPAAAATGFGVASRTGEGVRRVVSPQEEVLRQQAVAIVFSRFQARRKTRGACDSCLLPATPTAVAGGLFRLLRELGGQGGGAKDREIPGNPCVVLRAQGLMIYASLCNAHNGRGTLAFQTPRPSSGSLTPAVTAVAFVPPEHGVLPHASPAMQVLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQVAASM-----------------------PVWLL-------RMNSAHYDKMKELFSRSRVEGAA----RWQSSSTEHP---PPAWIGDFHDCLFSCLMRYEALQ-----ASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGRCGRNAFPTACWKQQCVSFLLSPPTEGAYQANPPFVRDVILKMATHMDGLLQTS 462
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: A0A835YQ92_9STRA (Phosphorylated CTD interacting factor 1 WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ92_9STRA) HSP 1 Score: 352 bits (904), Expect = 2.330e-104 Identity = 219/495 (44.24%), Postives = 276/495 (55.76%), Query Frame = 2
Query: 185 RLRGDDELLDLLDIMGGHHGDEKQAAGLDCSNSSSLNATTPTGAHQPSASDEVACVPETGWNRSIWNPHTF--EEGNAGAIGETAVRFVPPQEEVLRQQAVALVFSRFQVLGKELGVRLKNEMFERWQFSRKLKEGR------GGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGSLPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKA---LTFVVIVPCWEDSAGWKRLRDSVFLSKH-IKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAARQQQAEG----------TLEHACRELERAFDLRQ 1603
RLRGDDEL LL M GDE D S++ H A PE GWN+++WN E+ A A+ + PQ E LRQQA+ ++ +RF L ELGVR+KN++FE+WQF +K +E G DP+LP +F D L A L G + +Q+ ELGRA++AAL+ KQLR + P + A R+D TY + G+++LR+NSAHYDK++ L G+ R G+ A FHD+LFA L+RYE+L GGGFQA+ GD FDVLLR FGA MECFASP N RY+R+C+AF DTD PFG SFFDFRP G+YEANPPFV V+ M HM++LL A + A L F VIVP WE A W+RL S + + L Q+DHGYCEG+Q LRR RY++AS TSVFFLQT AA E AC EL AF RQ
Sbjct: 4 RLRGDDELDMLLASM---EGDETPTNQSDDGGSAAPTLGVAGEQHTQRAE------PERGWNKAVWNAGVCKPEDAIAAAMPDRVAMQTTPQVECLRQQALTVLRARFAALTTELGVRVKNDVFEKWQFGQKARERATDGALPGDDPLLPRGAFRDGTLVAALEAAGADGAQAHVAVRELGRAARAALQVFNKQLRTLP----------PSRRHATAARVDADTYCVSYGRHRLRVNSAHYDKLRALHAAHGSSSA----QRQRXXXXXXXGARAAA---PFHDALFALLLRYESLAGGGFQAAAPGDVFDVLLRRFGADMECFASPLNARYARHCTAFPDTDAPFGGACSFFDFRPASGSYEANPPFVPAVMDMMTEHMNALLRAAAAAGAALMFTVIVPAWEHEASWRRLARSPHAQRRRLLLAQRDHGYCEGRQQLRRTRYKIASAPTSVFFLQTPAAAAXXXXXXXXXXXAKWPVTEAACDELREAFRPRQ 472
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: A0A329T4D0_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4D0_9STRA) HSP 1 Score: 292 bits (747), Expect = 4.510e-84 Identity = 177/451 (39.25%), Postives = 255/451 (56.54%), Query Frame = 2
Query: 200 DELLDLLDIMGGHHGDE-KQAAGLDCSNSSSLNATTPTGAHQPSASDEVACVPETGWNRSIWNPHTFEEGNAGAIGE----TAVRFVPPQEEVLRQQAVALVFSRFQVLGKELGV-RLKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGS-LPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKALTFVVIVPCWEDSAGWKRLRDSVFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAA 1531
D L D+L M G+ + A+ ++S+ +A+ PT + E++ P +G IWNP + A+ E T R V P E+ RQQ V + ++ + ++LG+ +L N +E WQF+ +L + DP++P GL ELR+ G KS + C EL R S+ L+ +Q V G K K V ++D L G + +++++ H+ K++E+F R QG+ G DGS + P F +LF L+RY++L GGGFQA++ + FDVLL+ F KMECFASP NCRYSR+CSAF DTD FGSVGSFFDF P G +EANPPF+ VI +MA+HM +LL A L F+VI+P W+++ GW++L S F +H+ + QK HGYCEGKQ +R+ R+R+ASF TS+FF Q A
Sbjct: 16 DPLEDILASMAAATGNAPRPASAAPTKSASAASASIPTAKKRER---ELSSTPPSG----IWNPQEEMPLASSALRELEDATRNRAVNPAMEIARQQTVRALCNKIRRASEDLGIGKLPNSAYETWQFTSQLTV-KEHDPLIPHAGSDYSGLFEELRKAGATKSGATKKCKELTRESERMLRKFGQQ--DFVAG---------KKKKVQVAVMEDGMRQLTYGHSTVKLSADHFAKLREMFARK--QGL------------GDDGSNMAPKDQRQFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRFNQRHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSLFFWQNSKA 433
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: A0A3M6VL48_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL48_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.790e-83 Identity = 166/392 (42.35%), Postives = 233/392 (59.44%), Query Frame = 2
Query: 374 SIWNPHTFEEGNAGAIGET--AVRF--VPPQEEVLRQQAVALVFSRFQVLGKELGV-RLKNEMFERWQFSRKLKEGRGGDPILP-AESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGSLPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKALTFVVIVPCWEDSAGWKRLRDSVFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAA 1531
SIWNPH ++ A+ + A + V P E+ RQQ V + S+ + +LG+ +L N ++E WQF+ +L + DP++P AES + GL ELR+ G KS + C EL + S+ L+ +Q V G K V ++D T L GK+ +++++AH+ K++EL+ R GL G S + P F +LF L+RY++L GGGFQA++ + FDVLL+ F KMECFASP NCRYSR+CSAF DTD FGSVGSFFDF P G +EANPPF+ VI +MA+HM +LL A L F++I+P W+ + GW++L S F +H+ + QK HGYCEGKQ +R+ R+R+ASF TSVFF Q A
Sbjct: 49 SIWNPHEEMSLDSAALNKLIDAAKSCTVNPAMEIARQQIVRALCSKVRCASADLGIGKLPNSIYETWQFTSQLTV-KEHDPLIPHAESDYS-GLFEELRKAGATKSGATKKCKELTKESERMLRKFGQQ--DFVAG----------KKKVQVAVMEDDTRHLTYGKSMVKLSAAHFAKLRELYARK-----RGLDDDGSS--------MAPKDQRQFESALFCLLLRYDSLSGGGFQAALNEECFDVLLKEFNCKMECFASPLNCRYSRFCSAFLDTDFVFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLTAADGPLAFIIIIPTWQKTEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAMA 413
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: A0A024TWC3_9STRA (PCIF1_WW domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWC3_9STRA) HSP 1 Score: 287 bits (734), Expect = 1.640e-82 Identity = 182/451 (40.35%), Postives = 249/451 (55.21%), Query Frame = 2
Query: 278 NSSSLNATTPTGAH-QPSASDEVACVPETGWNRS--IWNPHTFEEGNAGAIGETAVR-----FVPPQEEVLRQQAVALVFSRFQVLGKELGV-RLKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGSLPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKALTFVVIVPCWEDSAGWKRLRDSVFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAARQQQAEGTLEHACRELERAFDLRQ 1603
N S+++ PT A +P+ ++ V + G + + IWN H + A E +R V P E+ RQ+ V + ++ +LG+ +L N +E WQF KL GDP++P GL EL +G N+ + +C + + + ++L LR GGG K + + R +D Y++ G LR+N H DK++ LF R AQ + SAS+ F D LF L+RYE+L GGGFQA++ + FDVLLRHF MECFASPFN RY R+CSAF DTD FGS GSFFDFRPT G +EANPPFV +I KMA HM + L+ TSK+L F+VI+P WE + GW+ L+ S + +++ L QK HGYCEGKQ +R RYR+ASF TSVFF Q A + E A +L RAF +Q
Sbjct: 18 NVSAISVDEPTLARSKPAPKKRMSAVVDGGDHATTAIWNEHVQVDVRHVASSEHNMRPCNLQSVSPAYELHRQKCVLKLKAKLHATVDQLGLPKLPNSAYETWQFCSKLA-APDGDPLIPHADSDYAGLRDELVAIGANRHAANKICRAMTQEAHRVGQSL---LRMTHGGG--------KKRATI--RPNDDHYLVSYGGTSLRINKTHLDKLETLFGRHHAQ------AGATSASQ-------------FPDFLFCLLLRYESLDGGGFQAALNEECFDVLLRHFKCNMECFASPFNSRYGRFCSAFLDTDRVFGSFGSFFDFRPTFGCFEANPPFVPALIAKMAAHMTTCLQNTSKSLCFIVIIPAWEHTEGWQLLKHSSYNKEYLVLSQKHHGYCEGKQQMRPTRYRIASFDTSVFFWQNAKAAARWP--VTERAIEDLRRAFKSKQ 433
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: A0A3R7HJ33_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HJ33_9STRA) HSP 1 Score: 286 bits (733), Expect = 2.080e-82 Identity = 163/414 (39.37%), Postives = 234/414 (56.52%), Query Frame = 2
Query: 377 IWNPHT---FEEGNAGAIGETAVRF-VPPQEEVLRQQAVALVFSRFQVLGKELGV-RLKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGSLPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKALTFVVIVPCWEDSAGWKRLRDSVFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAARQQQAEGTLEHACRELERAFDLRQ 1603
IWNP + + E A + P E+ RQQ V + ++ + ++LG+ +L N +E WQF+ KL DP++P GL ELR+ G KS + C EL R S+ L+ +Q V G K K V +D + L G + +++++AH+ K++E++ R G+ S+ P +F +LF L+RY++L GGGFQA++ + FDVLL++F AKMECFASP N RYSR+CSAF DTD FGSVGSFFDF P G +EANPPF+ VI +MA+HM +LL A L F+VI+P W+++ GW++L S + H+++ QK HGYCEGKQ +R+ R+R+ASF TSVFF Q A + E A L++AF +Q
Sbjct: 46 IWNPQVEMPLDSAVLRRLQEAAQSHTINPAMEITRQQTVRTLCNKIRKASEDLGIGKLPNSAYETWQFTSKLTVSEH-DPLIPHAGSDYSGLFEELRKAGATKSGATKKCKELTRESERMLRKFSQQ--NFVAG---------KKKHVHVAIAEDGMHQLTYGNSVVKLSAAHFAKLREMYARK-------------QDFSGNGSSMVPKARHEFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKYFDAKMECFASPLNSRYSRFCSAFLDTDAAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEGWQQLNASRYNQIHLRIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKACSKWP--VTEKALESLKQAFKSKQ 432
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: A0A6A3R028_9STRA (PCIF1_WW domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R028_9STRA) HSP 1 Score: 287 bits (734), Expect = 3.090e-82 Identity = 161/390 (41.28%), Postives = 226/390 (57.95%), Query Frame = 2
Query: 377 IWNPHTFEEGNAGAIGE----TAVRFVPPQEEVLRQQAVALVFSRFQVLGKELGV-RLKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGSLPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKALTFVVIVPCWEDSAGWKRLRDSVFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAA 1531
IWNP +A A+ + R V P E+ RQQ V + ++ + ++LG+ +L N +E WQF+ +L + DP++P GL ELR+ G KS + C EL R S+ L+ +Q V G K K V +D L G + +++++AH+ K++E++ R +G+ G S + H S F +LF L+RY++L GGGFQA++ + FDVLL+ F KMECFASP NCRYSR+CSAF DTD FGSVGSFFDF P G +EANPPF+ VI +MA+HM +LL A L F+VI+P W+D+ GW++L S + H+ + QK HGYCEGKQ +R+ R+R+ASF TSVFF Q A
Sbjct: 60 IWNPQQQMLLDAAALRQLEDAARARSVNPAMEIARQQTVRALCNKIRRASEDLGIGKLPNAAYETWQFTSQLTV-KELDPLIPHAGSDYSGLFEELRKAGATKSGAIKKCKELTRESERMLRRFGQQ--DFVAG---------KKKKVHVAAAEDDVRQLSYGNSTVKLSAAHFAKLREMYARK-----LGMSGDGSSMTPKHQRS--------FESALFCLLLRYDSLDGGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKA 424
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: M4B1W7_HYAAE (PCIF1_WW domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B1W7_HYAAE) HSP 1 Score: 282 bits (722), Expect = 9.100e-81 Identity = 159/392 (40.56%), Postives = 226/392 (57.65%), Query Frame = 2
Query: 374 SIWNPHTFEEGNAGAIG--ETAVRF--VPPQEEVLRQQAVALVFSRFQVLGKELGV-RLKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGS-LPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKALTFVVIVPCWEDSAGWKRLRDSVFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAA 1531
SIWNP +A A+ E A + + P E++RQQ+V + + + + ++LG+ +L N ++E WQF+ +L + DP++P GL EL + G KS + C E+ R S+ L+ V G K K V K ++ + L G ++ ++AH+ K+++++ R QG+ DGS + P + F +LF L+RY++L GGGFQA++ + FDVLL F KMECFASP NCRYSR+CSAF DTD FGSVGSFFDF P G YEANPPF+ VI +MA+HM +LL+ L F+VI+P W ++ GW+ L S F H+ + QK HGYCEGKQ +R+ R+R+ASF TSVFF Q A
Sbjct: 44 SIWNPLEEMPLDADALKKLEDAAKTLSITPSMEIMRQQSVRALCRKIRRVSEDLGIAKLPNSVYETWQFTSQLTV-KEHDPLIPHAGSGYSGLLEELCKAGATKSAATRKCKEITRESERMLRKF--DQHDFVAG---------KKKKVQVKVMEHEMHHLTYGNVTVKASAAHFAKLRDMYARRLEQGV--------------DGSKMTPKDLRQFESALFCLLLRYDSLDGGGFQAALNEECFDVLLNDFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCYEANPPFISKVIKRMADHMTALLDTADGPLAFIVIIPAWRETEGWQGLHASRFNQAHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKA 409
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Match: A0A6A4A4B0_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4A4B0_9STRA) HSP 1 Score: 287 bits (734), Expect = 1.470e-80 Identity = 161/390 (41.28%), Postives = 226/390 (57.95%), Query Frame = 2
Query: 377 IWNPHTFEEGNAGAIGE----TAVRFVPPQEEVLRQQAVALVFSRFQVLGKELGV-RLKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELRELGVNKSQSRNLCCELGRASKAALKTLKKQLRGVVGGGAPSPGRSPKNKGVLAKRLDDSTYVLQLGKNKLRMNSAHYDKMKELFRRAGAQGIVGLPSRGGSASRGHDGSLPPAWIGDFHDSLFACLMRYEALQGGGFQASMGGDAFDVLLRHFGAKMECFASPFNCRYSRYCSAFKDTDEPFGSVGSFFDFRPTEGAYEANPPFVRDVILKMANHMDSLLEATSKALTFVVIVPCWEDSAGWKRLRDSVFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTKAA 1531
IWNP +A A+ + R V P E+ RQQ V + ++ + ++LG+ +L N +E WQF+ +L + DP++P GL ELR+ G KS + C EL R S+ L+ +Q V G K K V +D L G + +++++AH+ K++E++ R +G+ G S + H S F +LF L+RY++L GGGFQA++ + FDVLL+ F KMECFASP NCRYSR+CSAF DTD FGSVGSFFDF P G +EANPPF+ VI +MA+HM +LL A L F+VI+P W+D+ GW++L S + H+ + QK HGYCEGKQ +R+ R+R+ASF TSVFF Q A
Sbjct: 60 IWNPQQQMLLDAAALRQLEDAARARSVNPAMEIARQQTVRALCNKIRRASEDLGIGKLPNAAYETWQFTSQLTV-KELDPLIPHAGSDYSGLFEELRKAGATKSGAIKKCKELTRESERMLRRFGQQ--DFVAG---------KKKKVHVAAAEDDVRQLSYGNSTVKLSAAHFAKLREMYARK-----LGMSGDGSSMTPKHQRS--------FESALFCLLLRYDSLDGGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKA 424 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig117.91.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig117.91.2 >prot_P-littoralis_Contig117.91.2 ID=prot_P-littoralis_Contig117.91.2|Name=mRNA_P-littoralis_Contig117.91.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=655bp MSRLRGDDELLDLLDIMGGHHGDEKQAAGLDCSNSSSLNATTPTGAHQPSback to top mRNA from alignment at P-littoralis_Contig117:314951..322913+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig117.91.2 ID=mRNA_P-littoralis_Contig117.91.2|Name=mRNA_P-littoralis_Contig117.91.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=7963bp|location=Sequence derived from alignment at P-littoralis_Contig117:314951..322913+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig117:314951..322913+ >mRNA_P-littoralis_Contig117.91.2 ID=mRNA_P-littoralis_Contig117.91.2|Name=mRNA_P-littoralis_Contig117.91.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1965bp|location=Sequence derived from alignment at P-littoralis_Contig117:314951..322913+ (Pylaiella littoralis U1_48)back to top |