prot_P-littoralis_Contig676.24.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig676.24.1
Unique Nameprot_P-littoralis_Contig676.24.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length116
Homology
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BLAST of mRNA_P-littoralis_Contig676.24.1 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 4.400e-34
Identity = 65/116 (56.03%), Postives = 81/116 (69.83%), Query Frame = 0 
Query:    1 MSALSKCSPLKRKQGGSTA--AKPRALFAAGNPDWPCLDKDCPDGRLKVCLRKKDNKEYATCDQNIWNDKNTCKVTLSMLLASKDHPHACQLCLCDVGGYPSIGIPTEEKDDRGYT 114
            M+ LSK SPLKRKQ  ++A   KPRAL   G   WPC D +  DG LKV ++KK+  ++ TCDQNIW D+ +CKV+LS+L  S+DHPH C LCL DVGG PS+G  T E D RGY+
Sbjct:  624 MNTLSKASPLKRKQQQASAPIVKPRALLTLGVEGWPCPDDNSTDGLLKV-VKKKNGGDFLTCDQNIWKDETSCKVSLSLLKPSQDHPHECSLCLKDVGGTPSLGTDTGETDSRGYS 738
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BLAST of mRNA_P-littoralis_Contig676.24.1 vs. uniprot
Match: A0A6H5JXZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ5_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 1.720e-16
Identity = 43/105 (40.95%), Postives = 60/105 (57.14%), Query Frame = 0 
Query:    8 SPLKRKQGGSTAAKPRALFAAGNPDWPCLDKDCPDGRLKVCLRKKDNKEYATCDQNIWNDKNTCKVTLSMLLASKDHPHACQLCLCDVGGYPSIGIPTEEKDDRG 112
            SP K+ +  S+ +K +  F AGNP WPC    C  G LK  + K +   ++ CDQ    D  TC+V+ S+L A    P  CQLCL  VGG PS+G+ + EK+ +G
Sbjct:    5 SPAKKIKSSSSTSKRK--FIAGNPLWPCPSIVCVPGLLKA-VPKTNGGLFSPCDQKDSQDSTTCQVSCSILSARGSDPPICQLCLTSVGGTPSLGVLSGEKNSQG 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig676.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4Z8_ECTSI4.400e-3456.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXZ5_9PHAE1.720e-1640.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig676contigP-littoralis_Contig676:107002..108545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig676.24.1mRNA_P-littoralis_Contig676.24.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig676 106273..108545 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig676.24.1 ID=prot_P-littoralis_Contig676.24.1|Name=mRNA_P-littoralis_Contig676.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=116bp
MSALSKCSPLKRKQGGSTAAKPRALFAAGNPDWPCLDKDCPDGRLKVCLR
KKDNKEYATCDQNIWNDKNTCKVTLSMLLASKDHPHACQLCLCDVGGYPS
IGIPTEEKDDRGYTG*
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