prot_P-littoralis_Contig675.6.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig675.6.1
Unique Nameprot_P-littoralis_Contig675.6.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length238
Homology
BLAST of mRNA_P-littoralis_Contig675.6.1 vs. uniprot
Match: D8LGF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF3_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.020e-47
Identity = 83/97 (85.57%), Postives = 86/97 (88.66%), Query Frame = 0
Query:    1 MAGSDSETFRPCRRVLTPGFSGAKHARLQRLARIEPSPRVTPRPTGLRTNAAASRRSGYDIPDPGLVLQSKHVTVDDTGRAAKERVSGELTLEKAVG 97
            MAGS +E FRPCRRVLTPGFSG + AR Q LARIE SPRVTPRPTGLRTNA ASRRSGYDIPDPGLVLQSKHV +DDTGR AKERVSGELTLEKA G
Sbjct:    1 MAGSATEQFRPCRRVLTPGFSGTEEARPQGLARIESSPRVTPRPTGLRTNAKASRRSGYDIPDPGLVLQSKHVVMDDTGRPAKERVSGELTLEKAFG 97          
BLAST of mRNA_P-littoralis_Contig675.6.1 vs. uniprot
Match: A0A7S3Y032_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y032_HETAK)

HSP 1 Score: 136 bits (343), Expect = 4.500e-36
Identity = 93/234 (39.74%), Postives = 128/234 (54.70%), Query Frame = 0
Query:    9 FRPCRRVLTPGFSGAKHARLQRLARI-EPSPRVT--PRPTGLRTNAAASRRSGYDIPDPGLVLQSKHVTVDDTGRAAKERVSGELTLEKAVGLKRKVNSQREKRGGVPAKGNPGDKLFHHVDYSPGFHQRGELIVGSSF--YRTMPRRGGGHRAPGSVTVPAAVPEGVGYA-LGYRKPKMAFHETRQASQYLEDLRGVLELTEAAPVPAAAGQEVGPSWEEKTGMHTWPINEKS 236
            FRP RRVL P  +GA   R + L R+ EP+ +      P G R N A +RRSGYD+P+P L +  K +  D  G  A+E VS E TLE  + +KRKV      R G+P   NPGDK + HVDYS  +H+ G L+ GS+F  YR   ++   +R+   +        G+G A + Y KP+M F E R   Q +++L  V  LT A+        E  PSWE++TGMHT+    K+
Sbjct:    1 FRPARRVLGPARTGADVPRPEGLRRLPEPTGKAPWDELPQGRRANPAGARRSGYDVPEPDLHMDRKSMVPDKNGALARETVSMERTLETFMTVKRKVPDAAGLRNGIPV-ANPGDKAYTHVDYSRDYHKGGGLVPGSTFALYR---KKSEDYRSNEQLQSK----NGMGAAAVNYMKPQMTFQEKRLMKQLMDELNDVRSLTNAS----TGYDEDIPSWEDRTGMHTYKTKNKN 222          
BLAST of mRNA_P-littoralis_Contig675.6.1 vs. uniprot
Match: A0A835YX95_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX95_9STRA)

HSP 1 Score: 112 bits (279), Expect = 4.480e-26
Identity = 73/164 (44.51%), Postives = 93/164 (56.71%), Query Frame = 0
Query:    4 SDSETFRPCRRVLTPGFSGAKHARLQRLARIEPSPR--VTPRPTG----------LRTNAAASRRSGYDIPDPGLVLQSKHVTVDD--TGRAAKERVSGELTLEKAVGLKRKVNSQREKRGGVPAKGNPGDKLFHHVDYSPGFHQRGELIVGSSFYRTMPRRGG 153
            SD+  FRP  R+        + A+ +R     P+ R   +P PTG          LR     SRRSG+D+PDP L LQ K V V D  TG  AK+ VSGELTLE+  G+K K+   R  R  + A+  PGDKL+HHVDYSPGF++ G  +VGS+F R   R GG
Sbjct:   42 SDTAAFRPHIRI-------DEQAKARRGREASPTGRKHFSPEPTGDGRAASARPGLRQIPELSRRSGFDMPDPDLSLQRKRVVVADAATGAFAKDHVSGELTLERTFGVKHKLAEMRGVRNAI-AQACPGDKLYHHVDYSPGFYREGGHVVGSTFVRDAARVGG 197          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig675.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LGF3_ECTSI1.020e-4785.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3Y032_HETAK4.500e-3639.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A835YX95_9STRA4.480e-2644.51Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 212..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig675contigP-littoralis_Contig675:13889..16126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig675.6.1mRNA_P-littoralis_Contig675.6.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig675 13889..16126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig675.6.1 ID=prot_P-littoralis_Contig675.6.1|Name=mRNA_P-littoralis_Contig675.6.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=238bp
MAGSDSETFRPCRRVLTPGFSGAKHARLQRLARIEPSPRVTPRPTGLRTN
AAASRRSGYDIPDPGLVLQSKHVTVDDTGRAAKERVSGELTLEKAVGLKR
KVNSQREKRGGVPAKGNPGDKLFHHVDYSPGFHQRGELIVGSSFYRTMPR
RGGGHRAPGSVTVPAAVPEGVGYALGYRKPKMAFHETRQASQYLEDLRGV
LELTEAAPVPAAAGQEVGPSWEEKTGMHTWPINEKSSP
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