prot_P-littoralis_Contig674.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig674.1.1
Unique Nameprot_P-littoralis_Contig674.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length155
Homology
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BLAST of mRNA_P-littoralis_Contig674.1.1 vs. uniprot
Match: D7FPF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF6_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 8.250e-23
Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 0 
Query:   20 VLGLAQAQSTACPTGVTAWNVSSPADALELIDALN-CAGPAQFEVDWSGKVSLTRTISISNGSSVTVTGLGAADEAVIDGDGAVRLFEVTEGSTLQLNTVSLVGGLSDEGGAI 131
            ++GLA++QS+ C  G+T  NVS+ A+ALEL D+LN CAG  +FEV+WSG V L++TI++ N +++TV G+GA + AVIDG  A+ LF V  GS L L+ VSL+GG   E G +
Sbjct:   14 IVGLAKSQSS-CSEGITTLNVSTTAEALELSDSLNNCAGSGEFEVNWSGNVLLSQTITVQNRTALTVRGVGA-EAAVIDGGDAISLFHVFNGSVLMLDGVSLIGGSGVESGGV 124
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BLAST of mRNA_P-littoralis_Contig674.1.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.160e-19
Identity = 65/146 (44.52%), Postives = 87/146 (59.59%), Query Frame = 0 
Query:   20 VLGLAQAQSTACPTGVTAWNVSSPADALELIDALNCAGPAQFEVDWSGKVSLTRTISISNGSSVTVTGLGAADEAVIDGDGAVRLFEVTEGSTLQLNTVSLVGGLSDE--------GGAIYSVSSNVIIGGDTT--FTNNAASSGG 155
            ++G+  AQ+  C   V A  VS+  +A EL +AL C+G  +FEV+W G+V L R I ISNGS V VTG  +A EAVIDG  AV LF V +GSTL+L+ +SLV G++          GGA+   S + I+   +     NNA  SGG
Sbjct:   13 MVGMPHAQAATCSVAVDARVVSTTEEASELSEALLCSGAGEFEVEWQGEVLLERPIFISNGSYVKVTG-ASAGEAVIDGGDAVVLFNVNDGSTLELDALSLVRGVATYTATYSYGGGGAVILRSDDCILTASSCSFIGNNAIDSGG 157
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig674.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPF6_ECTSI8.250e-2351.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWI3_9PHAE2.160e-1944.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 13..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig674contigP-littoralis_Contig674:247..34627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig674.1.1mRNA_P-littoralis_Contig674.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig674 247..34817 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig674.1.1 ID=prot_P-littoralis_Contig674.1.1|Name=mRNA_P-littoralis_Contig674.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=155bp
MATAPSRRIWRLFATSACVVLGLAQAQSTACPTGVTAWNVSSPADALELI
DALNCAGPAQFEVDWSGKVSLTRTISISNGSSVTVTGLGAADEAVIDGDG
AVRLFEVTEGSTLQLNTVSLVGGLSDEGGAIYSVSSNVIIGGDTTFTNNA
ASSGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence