prot_P-littoralis_Contig673.50.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig673.50.1
Unique Name	prot_P-littoralis_Contig673.50.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	272

Homology

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BLAST of mRNA_P-littoralis_Contig673.50.1 vs. uniprot
Match: A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE)

HSP 1 Score: 96.3 bits (238), Expect = 8.980e-19
Identity = 78/233 (33.48%), Postives = 97/233 (41.63%), Query Frame = 0

Query:   31 DPARQQELIDEQAQHVALLHTTGGRPFNLPTAWLDRFAIVE-DEPNGDDDDGHAGDDMXXXXXXXXXXXXXXXXXXXXXXXXSGRLPGAAPQRGPARDNSEGVRGDKGPGM----GAFSFFLATAAPFLCGKIDDERIDENGEREVCVHWYTPS-DSLVASAGSGNFDKYGRAVFRPTFKVVRTQAAQGRRQRTTYTPDNGWEPASRIAASCRFLTGKNKHIPAVVLHTLRTA 257
            D    Q   DEQ Q V LL  TG R F+LP  WL  +     DE N   D G   D                          S   P    +RG  R        D+ P +    G+F+FF+A  APFL G+I  ER+ E GER V +HW  PS D L  +A S    +Y  + F   F V+ T    GR  +     D  WEP   I A+C  L G  + +P  VL  LR A
Sbjct:  418 DDGAVQRAKDEQKQSVRLLRQTGEREFDLPVHWLPVYDSGSGDEENVGPDTGDNNDAEQDFNGSGGHDHDGIDDEADDTSSDSDMEPEFR-RRGRPRATGRPTT-DRSPPISVQVGSFAFFVARRAPFLVGRIVAERLGEEGERGVDLHWLRPSSDYLSNNAASVTLREYSNSTFVEGF-VLDTCNGNGRSGKAKRVKDVSWEPVEGIVATCERLVGNGRKVPTKVLRVLRAA 647

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig673.50.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig673.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5JUU1_9PHAE	8.980e-19	33.48	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..87

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig673	contig	P-littoralis_Contig673:147312..148127 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig673.50.1	mRNA_P-littoralis_Contig673.50.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig673 147283..148322 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig673.50.1 ID=prot_P-littoralis_Contig673.50.1|Name=mRNA_P-littoralis_Contig673.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=272bp
MEGPRSASAVHITRSLFTRLPAVTATTSLSDPARQQELIDEQAQHVALLH
TTGGRPFNLPTAWLDRFAIVEDEPNGDDDDGHAGDDMGDEGGEERHSDHE
SSDEEDLRERQSGRLPGAAPQRGPARDNSEGVRGDKGPGMGAFSFFLATA
APFLCGKIDDERIDENGEREVCVHWYTPSDSLVASAGSGNFDKYGRAVFR
PTFKVVRTQAAQGRRQRTTYTPDNGWEPASRIAASCRFLTGKNKHIPAVV
LHTLRTAKGLGQQARPLGARK*