prot_P-littoralis_Contig673.30.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig673.30.1
Unique Nameprot_P-littoralis_Contig673.30.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length282
Homology
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BLAST of mRNA_P-littoralis_Contig673.30.1 vs. uniprot
Match: Q8QNC2_ESV1K (EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNC2_ESV1K)

HSP 1 Score: 114 bits (286), Expect = 6.030e-25
Identity = 98/280 (35.00%), Postives = 144/280 (51.43%), Query Frame = 0 
Query:    1 MIPNLATSPSGINGTNVGGIAGQLTLEKGGLTGWVNAMIGNISGLIWSGGLIGRCFAYSGTDPMATLVNSMTGNITIGVTPNASLDTGVGGIMGYLYSAAVNTHFMNYMSGDRISLESTAFVGGILGQG-----GSASGEITSSMNAMNDNVENAIVGNDAGNISFSTTTRNTAFGLTY---NVDTTTPVDPTDVLYPTD--FMDLPYVVISATSPDAIDYDFDFIFANLAGSGNSSYNIYTHCVLHKGDIAGPLRVDFDVLESNTTLYTTFINYPNETV 270
            MI NLA  P+GI+G +VGGIAG     +  LT  VNAMIG++ G    GG+IG          M+    ++                 +G    Y  S++  T +MNYMSG+  S+  T   GGI+G        +    +++S+ AMN +V++A+VG D   +       +T+FG+TY   +  + TP++     Y TD  F  LPY+ +S T  D   Y++DFIFANLAG  N+SY  YTH  LH GD+  P   D D+ ++N   Y  + N  N ++
Sbjct:  206 MIRNLAIFPNGISGLSVGGIAGSA--HRTSLTRCVNAMIGDMHGTYRCGGIIGD------GSQMSKDCKNVVXXXXXXXXXXXXXXXXMGRFATY-NSSSDFTEWMNYMSGNITSM--TLSCGGIIGTAVDHDTATYYPSLSNSLVAMNGSVDHAVVG-DGDTLPLVGVLVDTSFGMTYTSHDYPSDTPLEG----YTTDTVFTALPYIPLSGTDSDGTVYEWDFIFANLAG--NASYADYTHLSLHTGDVQAPFYADLDLPDNNAMTYLAYANIDNNSL 467
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig673.30.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Q8QNC2_ESV1K6.030e-2535.00EsV-1-160 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig673contigP-littoralis_Contig673:76462..77307 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig673.30.1mRNA_P-littoralis_Contig673.30.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig673 75799..77939 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig673.30.1 ID=prot_P-littoralis_Contig673.30.1|Name=mRNA_P-littoralis_Contig673.30.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=282bp
MIPNLATSPSGINGTNVGGIAGQLTLEKGGLTGWVNAMIGNISGLIWSGG
LIGRCFAYSGTDPMATLVNSMTGNITIGVTPNASLDTGVGGIMGYLYSAA
VNTHFMNYMSGDRISLESTAFVGGILGQGGSASGEITSSMNAMNDNVENA
IVGNDAGNISFSTTTRNTAFGLTYNVDTTTPVDPTDVLYPTDFMDLPYVV
ISATSPDAIDYDFDFIFANLAGSGNSSYNIYTHCVLHKGDIAGPLRVDFD
VLESNTTLYTTFINYPNETVVQNALTRLLAY*
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