prot_P-littoralis_Contig673.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig673.10.1
Unique Nameprot_P-littoralis_Contig673.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length101
Homology
BLAST of mRNA_P-littoralis_Contig673.10.1 vs. uniprot
Match: A0A6H5KR45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR45_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.460e-16
Identity = 34/56 (60.71%), Postives = 45/56 (80.36%), Query Frame = 0
Query:   42 RIGCLLHILHLAVNAGMQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSS 97
            R+G +LHILH+++ AG  S+FFMGPL + SWHEW   H+ +LLG +WYNTSRS+SS
Sbjct:   67 RLGYVLHILHISITAGFTSVFFMGPLGKGSWHEWGTSHVFSLLGMVWYNTSRSNSS 122          
BLAST of mRNA_P-littoralis_Contig673.10.1 vs. uniprot
Match: A0A6H5JN38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN38_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 2.070e-13
Identity = 32/44 (72.73%), Postives = 35/44 (79.55%), Query Frame = 0
Query:   58 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCISW 101
            M+  FFMGPL + SWHEW   HLVALL +LWYN SRSDSSCISW
Sbjct:    1 MECEFFMGPLGKGSWHEWEDNHLVALLATLWYNISRSDSSCISW 44          
BLAST of mRNA_P-littoralis_Contig673.10.1 vs. uniprot
Match: D7FIQ1_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ1_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.840e-9
Identity = 25/40 (62.50%), Postives = 33/40 (82.50%), Query Frame = 0
Query:   58 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSS 97
            M S++FMGPL + SWHEW + H+ +LLG +WYNTSRS+SS
Sbjct:    1 MTSVYFMGPLGKGSWHEWERDHVFSLLGMVWYNTSRSESS 40          
BLAST of mRNA_P-littoralis_Contig673.10.1 vs. uniprot
Match: A0A6H5KH75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH75_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 6.480e-9
Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   58 MQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSS 97
            M S  FMGPL + SWHEW + H+ +LLG +WYNTSRS+SS
Sbjct:    1 MTSALFMGPLGKGSWHEWERDHIFSLLGMVWYNTSRSESS 40          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig673.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KR45_9PHAE1.460e-1660.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN38_9PHAE2.070e-1372.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIQ1_ECTSI1.840e-962.50Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
A0A6H5KH75_9PHAE6.480e-962.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig673contigP-littoralis_Contig673:27436..27738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig673.10.1mRNA_P-littoralis_Contig673.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig673 26841..27738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig673.10.1 ID=prot_P-littoralis_Contig673.10.1|Name=mRNA_P-littoralis_Contig673.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=101bp
MADSAQGRGQQPQSNNQFQQVESEPAPAAAASAFDGFVFAIRIGCLLHIL
HLAVNAGMQSLFFMGPLTQASWHEWPKPHLVALLGSLWYNTSRSDSSCIS
W
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