prot_P-littoralis_Contig672.24.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig672.24.1
Unique Nameprot_P-littoralis_Contig672.24.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length120
Homology
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BLAST of mRNA_P-littoralis_Contig672.24.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.050e-26
Identity = 63/131 (48.09%), Postives = 80/131 (61.07%), Query Frame = 0 
Query:    1 GSSCSSDGAAAGLEASDCCGSNIKASGVFCGDGVNPAPCILGG------ASTSTCSDDVTVGVDGKGVVCCPTSCSQCTGSGCSAAG-------DDXXGGGIVASGVYCQNGINDAPCILGSPPAPTPVPA 118
            G+ C++ GAA GL+ S CCG  +KAS  +C D  N APCI+G        S +TCS+ +  G+DG GVVCCP  C QC G+GC+ +G           GG I ASG YC    NDAPCI+GS PAP+P P+
Sbjct:  217 GTGCNTSGAAFGLDGSSCCGGGVKASDEYC-DETNEAPCIIGSRPTPSPTSANTCSNGLE-GIDGNGVVCCPLGCGQCGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDE-TNDAPCIIGSSPAPSPTPS 344
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BLAST of mRNA_P-littoralis_Contig672.24.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 1.050e-24
Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 0 
Query:    1 GSSCSSDGAAAGLEASDCCGSNIKASGVFCGDGVNPAPCILGGASTS--TCSDDVTVGVDGKGVVCCPTSCSQCTGSGCSAAG-------DDXXGGGIVASGVYCQNGINDAPCILGS 109
            G+ C+  G+AAGL +  CCG  IKASG +C D  N APCI+G   T+  TCS+ +  G+DG GVVCCP  C+QC G+GC+ +G       +   GGGI ASG YC +  N+APCI+GS
Sbjct:  496 GTGCTMSGSAAGLGSESCCGGGIKASGAYCDD-TNEAPCIIGSRPTTVETCSNGLE-GIDGNGVVCCPLECNQCGGTGCTTSGSAAGLGSESCCGGGIKASGAYCDD-TNEAPCIIGS 610
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig672.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JC43_9PHAE1.050e-2648.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQV4_ECTSI1.050e-2450.00Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig672contigP-littoralis_Contig672:99371..99906 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig672.24.1mRNA_P-littoralis_Contig672.24.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig672 99371..99906 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig672.24.1 ID=prot_P-littoralis_Contig672.24.1|Name=mRNA_P-littoralis_Contig672.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=120bp
GSSCSSDGAAAGLEASDCCGSNIKASGVFCGDGVNPAPCILGGASTSTCS
DDVTVGVDGKGVVCCPTSCSQCTGSGCSAAGDDCCGGGIVASGVYCQNGI
NDAPCILGSPPAPTPVPASV
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