mRNA_P-littoralis_Contig672.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: D7FSJ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSJ6_ECTSI) HSP 1 Score: 214 bits (544), Expect = 6.550e-66 Identity = 122/227 (53.74%), Postives = 151/227 (66.52%), Query Frame = 1
Query: 1 GKPRKNSTDE-AIPAEVVLALRATLTLVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGT-AERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQGKNTIR 675
G ++ DE AIPA+ +L R + +V V R+++ PF F +Y ADL+ MD ED E G + S TGS XXXXXXXX G+ ERKGPHCMMRLVGIL ED + PLLIDSR QA R +LD S VG R+++W ++RFRDPDH+VR+IVD E V H DPN+I QPNIS+EKL+KMWA K +WN +ANW SGNNQPW+ FCQGK +R
Sbjct: 50 GSEQEEGEDEGAIPAKALLMFRGVVKMVAVARDSTEPFTFEGVDYSAADLYDAMDKEDEEELGDFGDSAGGSAPTGSXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDFIRPLLIDSRFQATRQELDTSTVGPRNDLWTEVTDRFRDPDHKVRKIVDDEQVNHVDPNIIQQPNISSEKLTKMWAVGKGRWNPSYANWKGESGNNQPWLAFCQGKGWVR 276
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: D7FJ39_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ39_ECTSI) HSP 1 Score: 206 bits (523), Expect = 4.350e-61 Identity = 119/220 (54.09%), Postives = 145/220 (65.91%), Query Frame = 1
Query: 10 RKNSTDE---AIPAEVVLALRATLTLVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGTAERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQG 660
R DE AIPA+ +L R + +V + R+++ PF+ EY VADL+ + ED EA XXXXXXXX ERKGPHCMMRLVGIL ED + PLLI+SRLQA R LD S+VG R+E+W + RFRDPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+A+W S SGNNQPW++FCQG
Sbjct: 81 RNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--EAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYADWKSESGNNQPWLSFCQG 298
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: D7FU69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU69_ECTSI) HSP 1 Score: 208 bits (529), Expect = 4.450e-61 Identity = 120/220 (54.55%), Postives = 145/220 (65.91%), Query Frame = 1
Query: 10 RKNSTDE---AIPAEVVLALRATLTLVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGTAERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQG 660
R DE AIPA+ +L R + +V + R+++ PF+ EY VADL+ + ED EA XXXXXXXX ERKGPHCMMRLVGIL ED + PLLI+SRLQA R LD S+VG R+E+W + RFRDPDH+VR+IVD E V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW S SGNNQPW++FCQG
Sbjct: 204 RNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSNVPFQVDNVEYSVADLYDALAKED--EAGKGNSXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNELWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQG 421
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: A0A6H5L680_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L680_9PHAE) HSP 1 Score: 194 bits (493), Expect = 3.010e-59 Identity = 102/195 (52.31%), Postives = 135/195 (69.23%), Query Frame = 1
Query: 76 LVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGTAERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQG 660
+V + +++ P +Y VADL+ M+ ED E A G S+ +G++ S GG XXX +G T ERKGPHCMMRLVGIL ED + PL+++SRLQA R +LD SA G R+ +W ++RFRDP + VR++VD E V+H +PN+I QPNISAEK++KMW+ KAKWN P ANW S SGNNQPW++FCQG
Sbjct: 1 MVALACDSTKPLTVEGVDYSVADLYNAMEKEDQTELADSAGGSAPTGSS-STGGAVGPDGXXXXXGSGSNT-ERKGPHCMMRLVGILCEDSIRPLVMNSRLQATRQELDTSAGGPRNNLWTEVTDRFRDPGYHVRKVVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPFANWKSESGNNQPWLSFCQG 193
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: A0A6H5JZX9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX9_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.180e-58 Identity = 113/221 (51.13%), Postives = 145/221 (65.61%), Query Frame = 1
Query: 1 GKPRKNSTDEAIPAEVVLALRATLTLVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGT-AERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQG 660
G ++ + IPA+ +L R + +V + R+ + PF +Y VADL+ M+ E+ E E A G XXXXXXXX G+ ERKGPHCMMRLVGIL ED + PL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW S SGNNQPW++FCQG
Sbjct: 107 GSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPEL--------EDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFCQG 319
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: A0A6H5J7W8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7W8_9PHAE) HSP 1 Score: 200 bits (509), Expect = 2.750e-58 Identity = 112/221 (50.68%), Postives = 145/221 (65.61%), Query Frame = 1
Query: 1 GKPRKNSTDEAIPAEVVLALRATLTLVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGT-AERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQG 660
G ++ + IPA+ +L R + +V + R+ + PF +Y VADL+ M+ E+ E E A G XXXXXXXX G+ ERKGPHCMMRLVGIL ED + PL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR+IVD E V+H +PN+I QPNISAEK++K+W+ KAKWN P+ANW S SGNNQPW++FCQG
Sbjct: 269 GSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGVDYSVADLYDAMEKENTPEL--------EDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKVWSAAKAKWNTPYANWKSESGNNQPWLSFCQG 481
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: A0A6H5KKV3_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKV3_9PHAE) HSP 1 Score: 203 bits (517), Expect = 8.960e-58 Identity = 117/225 (52.00%), Postives = 146/225 (64.89%), Query Frame = 1
Query: 1 GKPRKNSTDE-----AIPAEVVLALRATLTLVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGTAERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQG 660
GK +++ +E AIPA+ +L R + +V + R++ PFK EY DL+ + ED EA XXXXXXXX ERKGPHCMMRLVGIL ED + PLLI+SRLQA R LD S+VG R+++W + RFRDPDH+VR+IVD + V+H DPN+I QPNISAEKLS+MWA KAKWNQP+ANW S SGNNQPW++FCQG
Sbjct: 311 GKSGRSNGEEDEEEGAIPAKALLTFRNVVGMVAIARDSKVPFKVDNVEYSAVDLYDALAKED--EAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGSNTERKGPHCMMRLVGILCEDAIRPLLIESRLQATRQDLDTSSVGPRNDLWTEVTTRFRDPDHQVRKIVDDQQVSHVDPNIIQQPNISAEKLSRMWATAKAKWNQPYANWKSESGNNQPWLSFCQG 533
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: A0A6H5KFU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFU0_9PHAE) HSP 1 Score: 197 bits (501), Expect = 4.830e-56 Identity = 111/221 (50.23%), Postives = 143/221 (64.71%), Query Frame = 1
Query: 1 GKPRKNSTDEAIPAEVVLALRATLTLVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGT-AERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQG 660
G ++ + IPA+ +L R + +V + R+ + PF +Y V DL+ M+ E+ E E A G XXXXXXXX G+ ERKGPHCMMRLVGIL ED + PL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR+IVD E V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW S SGNNQPW++F QG
Sbjct: 269 GSEQEEGEEGVIPAKALLMFRGVINMVALARDRTEPFTVEGMDYSVTDLYDAMEKENTPEL--------EDSAGGXXXXXXXXXXXXXXXXXXSGSITERKGPHCMMRLVGILCEDSIRPLVINSRLQATRQELDTSAVGPRKHLWTEVTDRFRDPRHHVRKIVDDEQVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKSESGNNQPWLSFAQG 481
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: A0A6H5K6G9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6G9_9PHAE) HSP 1 Score: 192 bits (488), Expect = 1.840e-55 Identity = 115/218 (52.75%), Postives = 140/218 (64.22%), Query Frame = 1
Query: 1 GKPRKNSTDE-----AIPAEVVLALRATLTLVRVDRNASTPFKFGPREYDVADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGTAERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQP 639
GK +++ +E AIPA+ L R +V + R++ PFK EY ADLF + ED A G S+ +G GS XXXXXXXX ER GPHCMMRLVGIL ED + PLL +SRLQA R LD S+VG R+++W + RFRDPDH+VR+IVD E V+H DPN+I Q ISAEKLS+MWA KAKWNQP+ANW S SGNNQP
Sbjct: 244 GKSGRSNGEEDEEEGAIPAKAFLTFRNVFGMVAIARDSKEPFKVDNVEYSAADLFDALAEEDEAATADSAGGSAPTG--GSSXXXXXXXXXXXXXXXSGSNTERNGPHCMMRLVGILCEDVIRPLLTESRLQATRQDLDTSSVGPRNDLWTEVTARFRDPDHQVRKIVDDEQVSHVDPNIIQQSTISAEKLSRMWATAKAKWNQPYANWKSESGNNQP 459
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Match: A0A6H5KNY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNY9_9PHAE) HSP 1 Score: 189 bits (480), Expect = 5.290e-54 Identity = 110/222 (49.55%), Postives = 141/222 (63.51%), Query Frame = 1
Query: 1 GKPRKNSTDE-AIPAEVVLALRATLTLVRVDRNASTPFKFGPREYD-VADLFAIMDAEDAVEAAAEGGRSSESGATGSCGGTXXXXXXXXAA*AGVGTAERKGPHCMMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDPDHEVRRIVDHEMVAHCDPNVIHQPNISAEKLSKMWAGVKAKWNQPHANWSSTSGNNQPWVNFCQG 660
G ++ +E AIPA +L R + +V + R+++ PF +Y VADL+ M+ ED E G XXXXXXXX ERKGPHCMMRLVG+L ED + PL+I+SRLQA R +LD SAVG R +W ++RFRDP H VR VD E+V+H +PN+I QPNISAEK++KMW+ KAKWN P+ANW SGNNQPW++FCQG
Sbjct: 111 GSEQEEGEEEGAIPASALLMFRGVVNMVALARDSTEPFTVEGVDYSSVADLYDAMEKEDKPELEDSAGXXXXXX-------XXXXXXXXXXXXXSGNITERKGPHCMMRLVGMLCEDSIRPLVINSRLQATRQELDNSAVGPRKHLWTEVTDRFRDPRHNVRISVDDELVSHVNPNIIQQPNISAEKITKMWSAAKAKWNTPNANWKRESGNNQPWLSFCQG 325 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig672.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig672.2.1 >prot_P-littoralis_Contig672.2.1 ID=prot_P-littoralis_Contig672.2.1|Name=mRNA_P-littoralis_Contig672.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=121bp MMRLVGILVEDDVHPLLIDSRLQANRAQLDASAVGSRSEVWQVASERFRDback to top mRNA from alignment at P-littoralis_Contig672:18972..19909+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig672.2.1 ID=mRNA_P-littoralis_Contig672.2.1|Name=mRNA_P-littoralis_Contig672.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=938bp|location=Sequence derived from alignment at P-littoralis_Contig672:18972..19909+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig672:18972..19909+ >mRNA_P-littoralis_Contig672.2.1 ID=mRNA_P-littoralis_Contig672.2.1|Name=mRNA_P-littoralis_Contig672.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=363bp|location=Sequence derived from alignment at P-littoralis_Contig672:18972..19909+ (Pylaiella littoralis U1_48)back to top |