prot_P-littoralis_Contig670.20.1 (polypeptide) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A6H5JT49_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT49_9PHAE) HSP 1 Score: 320 bits (821), Expect = 1.560e-108 Identity = 165/234 (70.51%), Postives = 189/234 (80.77%), Query Frame = 0
Query: 1 MTREVALLILSFIVNCGGFTIRSNSRKLT------CFPALDICGRGGGSRHRSSSSGVVQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPFS 228
M RE+ L++L I CGGF + +R+L C+ G +R RSSS+ ++MSI EMIGADVESGG+FDPLGFS+DEPSLFRRRAVELKHGRVAMLAVTGI+VQ+FV FPGFPPFPVSN ARPLAVLKGL+S + N+V+L LL G +ELTIGKQDYVDRAPGELGEFG FAKPVD++EW KVQMAELKHGRLAMLGVVGC VQE VTG+GPVEQLL GNI PF+
Sbjct: 1 MGREITLMMLGLIAGCGGFAVPPTARRLRPNAARGCWRRPSQNGCHSSTRSRSSSAARIEMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMLAVTGILVQSFVHFPGFPPFPVSNPARPLAVLKGLLSTEGNNVVLFLLGTGVVELTIGKQDYVDRAPGELGEFGAFAKPVDKEEWDKVQMAELKHGRLAMLGVVGCLVQELVTGEGPVEQLLNGNIFPFA 234
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A835ZIK7_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK7_9STRA) HSP 1 Score: 198 bits (503), Expect = 6.790e-61 Identity = 96/182 (52.75%), Postives = 136/182 (74.73%), Query Frame = 0
Query: 46 RSSSSGVVQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 227
RS+++ V +M++ +M+GAD+E+ GV+DPL S+D+ +LF+ R VELKHGRVAMLA G++VQ+F P PV + RPLA L +++++ + L +GA EL+IGKQDY ++APG++ FG F KP DEDEW K+Q+ ELK+GRLAM+ +G FVQEA+TGQGP+EQL +G+ISPF
Sbjct: 4 RSAAAAVTRMAVQDMLGADIETSGVWDPLRLSKDDGNLFKYREVELKHGRVAMLATLGVLVQSFNHLPD----PVFSNPRPLAALSQILAERPVAFWQIFLAVGAFELSIGKQDYENKAPGDIATFGDFVKPSDEDEWEKIQLRELKNGRLAMVASIGMFVQEALTGQGPIEQLQVGHISPF 181
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A835ZAI4_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI4_9STRA) HSP 1 Score: 191 bits (486), Expect = 6.160e-58 Identity = 95/176 (53.98%), Postives = 127/176 (72.16%), Query Frame = 0
Query: 52 VVQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 227
V +MS+ +M+G DVE+GG+FDPLGFS+DE SLFRRRAVELKHGR+ MLA G++VQT+V P V + RP+ L ++ + + + LL IG LELT G QDY ++APG+LG FG KP D E ++Q+ ELK+GRLAM+G++G VQE +T QGP+EQLL+G+ SPF
Sbjct: 38 VTRMSVEDMVGIDVETGGLFDPLGFSKDEASLFRRRAVELKHGRICMLATFGVLVQTYVHLPDA----VFSNPRPIGALLQVLDQRPVAAIQILLAIGLLELTAGAQDYANKAPGDLGRFGDAFKPDDAGELAELQLKELKNGRLAMMGIMGMLVQEGLTKQGPIEQLLVGHTSPF 209
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: W7U405_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U405_9STRA) HSP 1 Score: 178 bits (451), Expect = 8.810e-53 Identity = 93/175 (53.14%), Postives = 126/175 (72.00%), Query Frame = 0
Query: 53 VQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 227
V+M+++EMIG+DVE+ GVFDPLG ++DE SL+R R +ELKHGRVAMLA G +VQ+F P V + RPLA L + S++ + L IGA+ELTIGKQD +RAPG++G FG P D +++ +Q+ ELK+GRLAM+ ++G FVQE +TGQGP+EQLL G+ SPF
Sbjct: 30 VRMAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPD----EVFSNPRPLAALAQVYSERPVAFWQIFLAIGAIELTIGKQDTANRAPGDVG-FGAAFIPDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPF 199
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A0G4GDB0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GDB0_VITBC) HSP 1 Score: 174 bits (440), Expect = 5.150e-51 Identity = 95/176 (53.98%), Postives = 124/176 (70.45%), Query Frame = 0
Query: 54 QMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTF-VRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPFS 228
+MS+ EMIGADVE+GGVFDPL FSEDE SLFRRRAVELKHGR+AMLA G VQ+ V P PV + RPL+ L +++++ + + I A+EL G+QDY ++APG+LG FG K D +E+ K Q+ ELK+GRLAM+G++G VQE +TGQ EQ+ GNI+PFS
Sbjct: 43 KMSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPD----PVFSEPRPLSALTKVLTERPWAAAQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINPFS 214
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: W7TRI0_9STRA (Light-harvesting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRI0_9STRA) HSP 1 Score: 171 bits (433), Expect = 1.770e-50 Identity = 91/173 (52.60%), Postives = 122/173 (70.52%), Query Frame = 0
Query: 55 MSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 227
MS S+MIG DVE+GG+FDPLGFS+DE SL++ R VELKHGRVAMLA G +VQ++ P V + RPL L L+S++ ++L ++ I +E+T GKQD + APG+LG FG KP E E VQ+ ELK+GRLAM+ ++G +VQE +TGQGP+EQ+ G+ISPF
Sbjct: 1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPD----DVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQD-PELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPF 168
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A6H5KVZ6_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVZ6_9PHAE) HSP 1 Score: 168 bits (426), Expect = 9.800e-49 Identity = 89/174 (51.15%), Postives = 118/174 (67.82%), Query Frame = 0
Query: 56 SISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDY--VDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 227
++SEM+GA E+GGVFDPLG + DE SL+RRR ELKHGRV MLA G++VQ+FV+FP SN RPL L + ++ +L + ++G +ELTIG++DY + PG+LGE A+P D W + Q+ ELKHGRLA LG+ G QE VT +GPVEQLL G+I+PF
Sbjct: 52 AVSEMVGASEETGGVFDPLGLATDETSLYRRRVAELKHGRVCMLATVGVLVQSFVQFPDPDRSAFSNT-RPLGALFQVWRERPVILLGIVALMGLIELTIGREDYGSSEAEPGKLGELWQTARPEDPQLWRRRQLQELKHGRLASLGITGMLAQELVTHEGPVEQLLKGDINPF 224
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: D8LBT8_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT8_ECTSI) HSP 1 Score: 164 bits (416), Expect = 5.970e-48 Identity = 87/170 (51.18%), Postives = 115/170 (67.65%), Query Frame = 0
Query: 60 MIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDY--VDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 227
M+GA E+GGVFDPLG + DE SL+RRR ELKHGRV MLA G++VQ+FV+FP SN RPL L + ++ +L + ++G +ELTIG++DY + PG+LG+F A+P D W + Q+ ELKHGRLA LG+ G QE VT +GPVEQLL G+I+PF
Sbjct: 1 MVGASEETGGVFDPLGLATDETSLYRRRVAELKHGRVCMLATVGVLVQSFVQFPDPDRSAFSNT-RPLGALFQVWRERPVILLGIVALMGLIELTIGREDYGSSEAEPGKLGDFWQAARPEDPQLWRRRQLQELKHGRLASLGITGMLAQELVTHEGPVEQLLKGDINPF 169
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: D5KBP8_ELYCH (Light harvesting complex protein 3 (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=D5KBP8_ELYCH) HSP 1 Score: 162 bits (409), Expect = 3.130e-47 Identity = 80/148 (54.05%), Postives = 106/148 (71.62%), Query Frame = 0
Query: 71 FDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQ 218
+DPLGFS+DE SLFRRR VELKHGR+ MLA G+ VQ + P PV + RP+ L + +++ ++ +L IGA+EL+IGKQDY ++APG+LG FG FAKP D EW KVQ+ ELK+GRLAM+ ++G VQE +T QGP+EQ
Sbjct: 1 WDPLGFSKDEASLFRRRVVELKHGRICMLATLGVFVQNSIHLPD----PVFSNPRPIGALLQVFAERPIAIWQIILAIGAIELSIGKQDYENKAPGDLGSFGDFAKPSDPIEWEKVQLRELKNGRLAMMAIMGMLVQEGLTKQGPLEQ 144
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A835Z571_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z571_9STRA) HSP 1 Score: 163 bits (412), Expect = 8.080e-47 Identity = 88/175 (50.29%), Postives = 125/175 (71.43%), Query Frame = 0
Query: 53 VQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 227
++MS+ E+IGAD E+GGV+DP GF++D+ +L++ R VELKHGRVAMLA G++VQ+FV P P F ++ ARP L S + ++ L GA+EL + KQD ++APG+LG FG + P E+E +Q+ ELK+GRLAM+ +VG FVQE +TGQGP+EQ+L G++SPF
Sbjct: 38 LRMSVEELIGADTETGGVWDPAGFAKDDAALYKYREVELKHGRVAMLATLGVLVQSFVTLPD-PVF--ADGARPQTAAFELASSRPEALAQIFLACGAVELLVLKQD-PEKAPGDLG-FGAY--PDTEEELEVLQLKELKNGRLAMMAIVGMFVQEKLTGQGPIEQILAGHVSPF 205 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_P-littoralis_Contig670.20.1 ID=prot_P-littoralis_Contig670.20.1|Name=mRNA_P-littoralis_Contig670.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bpback to top |