mRNA_P-littoralis_Contig670.20.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig670.20.1
Unique NamemRNA_P-littoralis_Contig670.20.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A6H5JT49_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT49_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 4.250e-101
Identity = 165/234 (70.51%), Postives = 189/234 (80.77%), Query Frame = 1 
Query:    1 MTREVALLILSFIVNCGGFTIRSNSRKLT------CFPALDICGRGGGSRHRSSSSGVVQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPFS 684
            M RE+ L++L  I  CGGF +   +R+L       C+      G    +R RSSS+  ++MSI EMIGADVESGG+FDPLGFS+DEPSLFRRRAVELKHGRVAMLAVTGI+VQ+FV FPGFPPFPVSN ARPLAVLKGL+S + N+V+L LL  G +ELTIGKQDYVDRAPGELGEFG FAKPVD++EW KVQMAELKHGRLAMLGVVGC VQE VTG+GPVEQLL GNI PF+
Sbjct:    1 MGREITLMMLGLIAGCGGFAVPPTARRLRPNAARGCWRRPSQNGCHSSTRSRSSSAARIEMSIREMIGADVESGGLFDPLGFSKDEPSLFRRRAVELKHGRVAMLAVTGILVQSFVHFPGFPPFPVSNPARPLAVLKGLLSTEGNNVVLFLLGTGVVELTIGKQDYVDRAPGELGEFGAFAKPVDKEEWDKVQMAELKHGRLAMLGVVGCLVQELVTGEGPVEQLLNGNIFPFA 234
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A835ZIK7_9STRA (Chlorophyll a/b-binding protein domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIK7_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.730e-55
Identity = 96/182 (52.75%), Postives = 136/182 (74.73%), Query Frame = 1 
Query:  136 RSSSSGVVQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 681
            RS+++ V +M++ +M+GAD+E+ GV+DPL  S+D+ +LF+ R VELKHGRVAMLA  G++VQ+F   P     PV +  RPLA L  +++++  +     L +GA EL+IGKQDY ++APG++  FG F KP DEDEW K+Q+ ELK+GRLAM+  +G FVQEA+TGQGP+EQL +G+ISPF
Sbjct:    4 RSAAAAVTRMAVQDMLGADIETSGVWDPLRLSKDDGNLFKYREVELKHGRVAMLATLGVLVQSFNHLPD----PVFSNPRPLAALSQILAERPVAFWQIFLAVGAFELSIGKQDYENKAPGDIATFGDFVKPSDEDEWEKIQLRELKNGRLAMVASIGMFVQEALTGQGPIEQLQVGHISPF 181
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A835ZAI4_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAI4_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.060e-52
Identity = 95/176 (53.98%), Postives = 127/176 (72.16%), Query Frame = 1 
Query:  154 VVQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 681
            V +MS+ +M+G DVE+GG+FDPLGFS+DE SLFRRRAVELKHGR+ MLA  G++VQT+V  P      V +  RP+  L  ++  +  + +  LL IG LELT G QDY ++APG+LG FG   KP D  E  ++Q+ ELK+GRLAM+G++G  VQE +T QGP+EQLL+G+ SPF
Sbjct:   38 VTRMSVEDMVGIDVETGGLFDPLGFSKDEASLFRRRAVELKHGRICMLATFGVLVQTYVHLPDA----VFSNPRPIGALLQVLDQRPVAAIQILLAIGLLELTAGAQDYANKAPGDLGRFGDAFKPDDAGELAELQLKELKNGRLAMMGIMGMLVQEGLTKQGPIEQLLVGHTSPF 209
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: W7U405_9STRA (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U405_9STRA)

HSP 1 Score: 178 bits (452), Expect = 6.190e-48
Identity = 93/175 (53.14%), Postives = 126/175 (72.00%), Query Frame = 1 
Query:  157 VQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 681
            V+M+++EMIG+DVE+ GVFDPLG ++DE SL+R R +ELKHGRVAMLA  G +VQ+F   P      V +  RPLA L  + S++  +     L IGA+ELTIGKQD  +RAPG++G FG    P D +++  +Q+ ELK+GRLAM+ ++G FVQE +TGQGP+EQLL G+ SPF
Sbjct:   30 VRMAVNEMIGSDVETNGVFDPLGLAKDEASLYRSRLIELKHGRVAMLACLGTLVQSFYHLPD----EVFSNPRPLAALAQVYSERPVAFWQIFLAIGAIELTIGKQDTANRAPGDVG-FGAAFIPDDAEDFAALQLKELKNGRLAMMAIIGQFVQEKLTGQGPIEQLLEGHFSPF 199
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A0G4GDB0_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GDB0_VITBC)

HSP 1 Score: 174 bits (441), Expect = 2.680e-46
Identity = 95/176 (53.98%), Postives = 124/176 (70.45%), Query Frame = 1 
Query:  160 QMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTF-VRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPFS 684
            +MS+ EMIGADVE+GGVFDPL FSEDE SLFRRRAVELKHGR+AMLA  G  VQ+  V  P     PV +  RPL+ L  +++++  +    +  I A+EL  G+QDY ++APG+LG FG   K  D +E+ K Q+ ELK+GRLAM+G++G  VQE +TGQ   EQ+  GNI+PFS
Sbjct:   43 KMSVEEMIGADVETGGVFDPLKFSEDEASLFRRRAVELKHGRIAMLACLGYFVQSAGVHLPD----PVFSEPRPLSALTKVLTERPWAAAQIVAAIAAIELGPGRQDYENKAPGDLGYFGDSFKNSDPEEFRKDQLRELKNGRLAMIGIMGMMVQEGLTGQSVWEQIGSGNINPFS 214
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: W7TRI0_9STRA (Light-harvesting protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRI0_9STRA)

HSP 1 Score: 171 bits (434), Expect = 7.510e-46
Identity = 91/173 (52.60%), Postives = 122/173 (70.52%), Query Frame = 1 
Query:  163 MSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 681
            MS S+MIG DVE+GG+FDPLGFS+DE SL++ R VELKHGRVAMLA  G +VQ++   P      V +  RPL  L  L+S++  ++L  ++ I  +E+T GKQD  + APG+LG FG   KP  E E   VQ+ ELK+GRLAM+ ++G +VQE +TGQGP+EQ+  G+ISPF
Sbjct:    1 MSASDMIGIDVETGGLFDPLGFSKDEQSLYKYRQVELKHGRVAMLACLGTLVQSYTHLPD----DVFSNPRPLGALGQLLSERPLAILQIVIAITLIEVTSGKQD-PELAPGQLGRFGEAFKPEGEAEMAAVQLKELKNGRLAMVAIIGQWVQELLTGQGPIEQITSGHISPF 168
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A6H5KVZ6_9PHAE (LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVZ6_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 3.440e-44
Identity = 89/174 (51.15%), Postives = 118/174 (67.82%), Query Frame = 1 
Query:  166 SISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDY--VDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 681
            ++SEM+GA  E+GGVFDPLG + DE SL+RRR  ELKHGRV MLA  G++VQ+FV+FP       SN  RPL  L  +  ++   +L  + ++G +ELTIG++DY   +  PG+LGE    A+P D   W + Q+ ELKHGRLA LG+ G   QE VT +GPVEQLL G+I+PF
Sbjct:   52 AVSEMVGASEETGGVFDPLGLATDETSLYRRRVAELKHGRVCMLATVGVLVQSFVQFPDPDRSAFSNT-RPLGALFQVWRERPVILLGIVALMGLIELTIGREDYGSSEAEPGKLGELWQTARPEDPQLWRRRQLQELKHGRLASLGITGMLAQELVTHEGPVEQLLKGDINPF 224
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: D8LBT8_ECTSI (Light harvesting complex protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBT8_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 1.550e-43
Identity = 87/170 (51.18%), Postives = 115/170 (67.65%), Query Frame = 1 
Query:  178 MIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDY--VDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 681
            M+GA  E+GGVFDPLG + DE SL+RRR  ELKHGRV MLA  G++VQ+FV+FP       SN  RPL  L  +  ++   +L  + ++G +ELTIG++DY   +  PG+LG+F   A+P D   W + Q+ ELKHGRLA LG+ G   QE VT +GPVEQLL G+I+PF
Sbjct:    1 MVGASEETGGVFDPLGLATDETSLYRRRVAELKHGRVCMLATVGVLVQSFVQFPDPDRSAFSNT-RPLGALFQVWRERPVILLGIVALMGLIELTIGREDYGSSEAEPGKLGDFWQAARPEDPQLWRRRQLQELKHGRLASLGITGMLAQELVTHEGPVEQLLKGDINPF 169
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: D5KBP8_ELYCH (Light harvesting complex protein 3 (Fragment) n=4 Tax=Eukaryota TaxID=2759 RepID=D5KBP8_ELYCH)

HSP 1 Score: 162 bits (410), Expect = 6.530e-43
Identity = 80/151 (52.98%), Postives = 107/151 (70.86%), Query Frame = 1 
Query:  211 FDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLL 663
            +DPLGFS+DE SLFRRR VELKHGR+ MLA  G+ VQ  +  P     PV +  RP+  L  + +++  ++   +L IGA+EL+IGKQDY ++APG+LG FG FAKP D  EW KVQ+ ELK+GRLAM+ ++G  VQE +T QGP+EQ  +
Sbjct:    1 WDPLGFSKDEASLFRRRVVELKHGRICMLATLGVFVQNSIHLPD----PVFSNPRPIGALLQVFAERPIAIWQIILAIGAIELSIGKQDYENKAPGDLGSFGDFAKPSDPIEWEKVQLRELKNGRLAMMAIMGMLVQEGLTKQGPLEQFAV 147
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BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Match: A0A835Z571_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z571_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.870e-42
Identity = 88/175 (50.29%), Postives = 125/175 (71.43%), Query Frame = 1 
Query:  157 VQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLAVTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGALELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLGVVGCFVQEAVTGQGPVEQLLLGNISPF 681
            ++MS+ E+IGAD E+GGV+DP GF++D+ +L++ R VELKHGRVAMLA  G++VQ+FV  P  P F  ++ ARP      L S +  ++    L  GA+EL + KQD  ++APG+LG FG +  P  E+E   +Q+ ELK+GRLAM+ +VG FVQE +TGQGP+EQ+L G++SPF
Sbjct:   38 LRMSVEELIGADTETGGVWDPAGFAKDDAALYKYREVELKHGRVAMLATLGVLVQSFVTLPD-PVF--ADGARPQTAAFELASSRPEALAQIFLACGAVELLVLKQD-PEKAPGDLG-FGAY--PDTEEELEVLQLKELKNGRLAMMAIVGMFVQEKLTGQGPIEQILAGHVSPF 205
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig670.20.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JT49_9PHAE4.250e-10170.51LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A835ZIK7_9STRA1.730e-5552.75Chlorophyll a/b-binding protein domain-containing ... [more]
A0A835ZAI4_9STRA1.060e-5253.98Light harvesting complex protein n=1 Tax=Tribonema... [more]
W7U405_9STRA6.190e-4853.14Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A0G4GDB0_VITBC2.680e-4653.98Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
W7TRI0_9STRA7.510e-4652.60Light-harvesting protein n=1 Tax=Nannochloropsis g... [more]
A0A6H5KVZ6_9PHAE3.440e-4451.15LHCP protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D8LBT8_ECTSI1.550e-4351.18Light harvesting complex protein n=1 Tax=Ectocarpu... [more]
D5KBP8_ELYCH6.530e-4352.98Light harvesting complex protein 3 (Fragment) n=4 ... [more]
A0A835Z571_9STRA1.870e-4250.29Light harvesting complex protein n=1 Tax=Tribonema... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig670contigP-littoralis_Contig670:105683..114537 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPU8
PFAMsChloroa_b-bind
Model size2381
Max annot lvl2759|Eukaryota
KEGG koko:K08907
KEGG Pathwayko00196,map00196
Hectar predicted targeting categorysignal peptide
Exons6
Evalue9.71e-43
EggNOG OGs2CDPH@1|root,2S44M@2759|Eukaryota
Ec32 ortholog descriptionLight harvesting complex protein (probable pseudogene)
Ec32 orthologEc-00_005570.1
DescriptionChlorophyll A-B binding protein
Cds size687
COG categoryU
BRITEko00000,ko00001,ko00194
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig670.20.1prot_P-littoralis_Contig670.20.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig670 105683..112843 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791399.335642-CDS-P-littoralis_Contig670:105682..1057471680791399.335642-CDS-P-littoralis_Contig670:105682..105747Pylaiella littoralis U1_48CDSP-littoralis_Contig670 105683..105747 +
1680791399.3535938-CDS-P-littoralis_Contig670:105819..1059771680791399.3535938-CDS-P-littoralis_Contig670:105819..105977Pylaiella littoralis U1_48CDSP-littoralis_Contig670 105820..105977 +
1680791399.364469-CDS-P-littoralis_Contig670:110497..1105591680791399.364469-CDS-P-littoralis_Contig670:110497..110559Pylaiella littoralis U1_48CDSP-littoralis_Contig670 110498..110559 +
1680791399.3797612-CDS-P-littoralis_Contig670:111117..1113061680791399.3797612-CDS-P-littoralis_Contig670:111117..111306Pylaiella littoralis U1_48CDSP-littoralis_Contig670 111118..111306 +
1680791399.39052-CDS-P-littoralis_Contig670:111998..1121931680791399.39052-CDS-P-littoralis_Contig670:111998..112193Pylaiella littoralis U1_48CDSP-littoralis_Contig670 111999..112193 +
1680791399.4022646-CDS-P-littoralis_Contig670:112825..1128431680791399.4022646-CDS-P-littoralis_Contig670:112825..112843Pylaiella littoralis U1_48CDSP-littoralis_Contig670 112826..112843 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791399.414246-UTR-P-littoralis_Contig670:112843..1145371680791399.414246-UTR-P-littoralis_Contig670:112843..114537Pylaiella littoralis U1_48UTRP-littoralis_Contig670 112844..114537 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig670.20.1

>prot_P-littoralis_Contig670.20.1 ID=prot_P-littoralis_Contig670.20.1|Name=mRNA_P-littoralis_Contig670.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bp
MTREVALLILSFIVNCGGFTIRSNSRKLTCFPALDICGRGGGSRHRSSSS
GVVQMSISEMIGADVESGGVFDPLGFSEDEPSLFRRRAVELKHGRVAMLA
VTGIVVQTFVRFPGFPPFPVSNAARPLAVLKGLMSDKTNSVLLALLVIGA
LELTIGKQDYVDRAPGELGEFGTFAKPVDEDEWFKVQMAELKHGRLAMLG
VVGCFVQEAVTGQGPVEQLLLGNISPFS*
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mRNA from alignment at P-littoralis_Contig670:105683..114537+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig670.20.1 ID=mRNA_P-littoralis_Contig670.20.1|Name=mRNA_P-littoralis_Contig670.20.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8855bp|location=Sequence derived from alignment at P-littoralis_Contig670:105683..114537+ (Pylaiella littoralis U1_48)
ATGACTCGAGAGGTTGCACTCTTGATCCTGAGCTTCATTGTGAATTGCGG
AGGCTTCACGATACGGTCCAAGGCATTGGTTCAAAGATGGAGACAAAATT
ATGGTGGACGCCCTGCTGCGTACAGCCCCAGGAACAGCAGTAACAGCAGA
AAGCTCACCTGCTTCCCCGCGTTGGACATCTGCGGTCGGGGCGGAGGGAG
CAGACATAGATCGTCGTCGTCTGGGGTGGTGCAGATGTCGATCAGCGAAA
TGATTGGCGCGGATGTCGAGAGCGGTGGCGTATTCGATCCGCTCGGTGAG
CGAAAGGGGGTGAATTATTAATTATATCCTCGTGCAACGAGAGACCTGGT
TCCTGATTTACTGCTCTACTTCCCAGTACACAAAGAAATGTGGAGTTGAA
GTGCTGGCGGAAGTGGGCTTTATGTGTGAGTGTGTGAGTGTTTTCTCTGA
GTGTTGTCATCCCCATTTATGCTCGACTCCAGGCCACTTTCCTCTACTTG
TACTTGCACGCCGTTCTTCATCAGCAAGTCCGCGCCACGTTTTATTGGCA
GGGAATCTCGAGCTTGTGCAAGCCAGTCGCAGGGCCTCATTTTCCAGATG
CGGCGAGATTAAAGCATCGGTCCAGTCTATCCAGGCTATCGTAGTACGTG
AGAAGTGCATGCCTGTTATGGCCTGCCATTTGGGCTGTGCATATTGTAGT
ACAAGACAGAACCAGAACACATCGGGGATGTGCACGCGTAGCAGCAGCAT
TGCGCCGCCGCATTTCATCCTTACTCTACTCCGAGAGGAACCGCGCTCGT
GGATGATCGCACATCTAGCGCGACCGCGATGTTCTCCGCGGTGAGGGTTG
CTCTTGGTGCCTCGATATGCTGTACAGCCGAGTCTACCCTACTTTCATCG
TTGGGTTACAAAACAAGCAGCATCAACGTATGGCGCTCTCTCAGGCGTTG
CGCGTCACGGCGCGGTGGTGACTTTCGCCGTTGTCCTTGTCGCCGATCGT
CACCACGCTGTACAGCAGTAGGCTACATCACCTGTCCCCAGCCCTTGAAG
CGACAACTTTGGCAATGTTGATTGTAACAGCAGTAGTTCCAAGGATGGGA
AAGGGTTCAAAAAGACAGAAAGACGGCTCACGCACCCAATGCTCTGTTCA
AAATGAGTGTTTGGTGCCTATTTTTCTTATGTTTTTGGCCCTTTTTTTTC
GTTAACAGCCGTGACAGCATTCCAAGCTCGGCTATGTAGGAGTGTAAAGA
AAAAAAAAACGCGGAAAACGAGCAAAATCTCGAACAGGACTGCCACACAC
AGAATCCTGTACCTGCTCTTCGTTTTTTCTTTTCTGAAGAAAATAACGTG
TTTGCGATAAGGAAATTTTAATTTGTAACGACCAGTTCGGGGGAATAGAT
ACCGACGGAAATCAAAATATGCAGAGCAAATTTGACTAAATCCATTGAAC
TTAGGCACATTTGGAGTTATATTTTGAAAGCTGCAGACCACCACAGGTAG
AACGACCACATCCATCCTGAGTGGTCAGGGTGTTCCCGAAAGCTCGCCAA
TTGGTCAAAACCAACCGAGTGACGTTGTAGACTGGAGTGGTGGGTGAATC
GAAGCACATTCCTTTGCGAAAGGTTTATCGTATTCTACCTTTCTTCGGCC
TGTGCCCTACACAAACAGACGCAGCGCCGGTGTGAACCTTTTGACGGGTA
GACAGCGCTTGACACCACACGCCCTCAAACCTTTGACATTCTCAGCGGAT
GAGAGACTCACCTATCTAGAGGTAGGTATAGTTAGCAGCGAATCTCGTCC
CTGTTTTGGCGAGAAACTCGTGAGTGTGGGCGTTGTTGTCTGCCGAAAAT
ATTGGGCCAGCCTGTTTGGCTCCCAGACAGGGGGAAAGCGTGTATGTATT
TCGGTGTCTAAATCGCGTGGCGGGTGACAGGGCCCACCTCTGATATTTAC
GGATGATGAGCAGTATTTGGACCCACCTCCTCTCCACAGGGAGGGGTGCA
GCATAGCAGGGATCCTCATGCATTTTTCGGGGAGAGATCAATCAGTGAAG
ACGTCGCCGAGCTGCTTTTCATGCCCGCTGATGTCATGGTGTGTATACAC
AGCATTGTGGGAGAAAAAAGCCGCTGCTGTATTTTTCCCGAGGGGATTTG
ACATTTTTTTGGTAGGCGCTTGTCACACGTCCGGGTTCCAAAAAATGTTG
GTTACGCACTACAAAGCACAGGGCAGGGCTAGATCTCGAGGGGTGTAGCT
TGTGGGGCATCTCGTCCGTTTTTCGTCCAGTAATGTGCAAGTATCTGCGA
TGGTGACCGGAGCACAGTAGCAGCAGCAGTATCACAGCACCTGACCTGCC
ACAAGAGCCAGCAAGTAACCCAACGCGAGTCAGGCTAACGGTCAGGATAC
CACCAAAAACATGAAAAATCGAATCCGCCCAATCGCACGGCGGATAGACT
TCATTTTGGAACTTTTTGACCGACGGAATTCTTTAAGTTGAAATCTCCTC
ATCACAAACACGTTAATAAGTCTCCGCATATTATTCAGAGCTCGAAGTAC
TCCCAGAGCCATCATACCCCTCCCCATGAAATCGGAGCCTTTGAGTTGGA
CGCACCAGCCGGGGGGCACACAGGAGGAAGGTCAACACAGAGGATATTTT
TTCCCCCTCCACTTTTCCATGAGCGGCGCTTGCCTTCTTTTGTCATCGCG
AGAAGCGCTTGGTAATCCCTTTTCCCCGACGACTCTGTTCGAGTCGCCTT
TTGTTTGCTCGCGAAATAATAGCTTCCCGCTCCGCGTATTGCTGTTGGTT
GGTCACATTCGCCAATCGCCAAGATCCAGCACGTGATAGCGAAAGCGCTG
AGCCCTACTTCACTCATAACTTCACTCATAAGTACATACGAAAGCTCCGA
GAAAAGCACTACCACGGTGCAGGTATGCATTCGAAAATAACGCTCTGTTC
TGTCCCACTCGTGGCTGCAGACTACAGCAGTTCGCGGTCTGGATTGCTGC
CTGCAACGTACCTGGTACAAAGGCCCATACTCGGAAAAACAGAACTAAGA
AAACGTATCATGATATTTGTCTGGAGTGCTGTCCGAATGACGAGACCCGC
AGGTAGTGCAGCGAAACAGTAGCGATTAACGAAAACTACCATGCTAGTCG
ACAGAAGTTTCCAAGTCTTTCACGAGTCGCTTATCATGGGCACAGCATTG
AATCACGCTTTTGACAGTGTGAATAACTCGTACCACGGTAAAGAGCACGA
CGCAGGCACCAAGTCGCGGAAATGACGCACGAATGACGTAGGCATTTGCG
TCCCTCTCCTCTCTACAAGAAACATGTGACGTAATCCAAACCCCCTCAAC
ATGTAAAATAAATGCAGGTCGTGACGTTTGTCGTCGTGGACCGTCTCGAT
ACTGCCCTTGTGCTGGTGATGCTGCCCATGGTTATCTCCAACTCCTCTGC
CATTCTGGGTCCACTTCGCTCTTGACGTTACCCTAGGCCACATCCAGCAC
CGTCACTCTCTTACCGTATCGCTGCTGACGTTGCCCTAGGCCACCCTCAG
CACCGGCCGCCGCTCTCGTGCACATACTCTCGTTCTTTGTTTCCAGCCGG
TTCCCCTCAGATCCCCTCTACACTTGAGGCTCACGGTCAGGGTGAGGTTA
ACCATGCTCTTCCCATTTCGTCGCCGCTCGTCTCCCTCCGGTTTTGGCTA
CGAAACCGGCTACTGGACACACAAGTCACCTGCCGTCATGTCGCCTATGG
TGTTGCCTGCCTACGCGCACAAATGGTTTTGACGTGCATCGCTGTACTGC
CGCTGTAACAAAAAAATACCCCGTCATCCGCACATTGTGCCTGGTGCACC
CAAAACAACCCAACTCCACCGCCACGCCCGTAGGCATCGACCACAGCGCA
GCAGCAAAAGGTACCAGCCCTTGAGGGTGAGTCCGGCCTTGCACCCGCCA
GAAAGGCCCTCCCAACTCGCTACGGGTCATGCCTTACAGCAGACCTTGAC
GAGGCAGCGAGGGGAACGGGGTTGGAGTCTGTGTATGGGTGCCCTGGCAT
CCCACGTACACTGAACGCCGGTCTACACCTTTCGGTACATGTGGGTGCAA
TAGCCGGGGGTCACACGGGAGCAAGGTCATGCATAGCTTTTTCTTTGCTG
TGCTCGATGGAAATGAAATGCCCAACACCTTACACACGCATGAGCAACGG
CAATGCGGTGCTAACAGAGATTCAAAACAGCGGCCGCTGAGTTGAAGTGA
CCGAGTGTATGGTGTGCTCTGGACCCACAGCACCGATCGAAGGCAGTTTC
CAGCTACCATTGTCGCTGTGGATTACTGCGAACGCGTTTATACATGCGGT
AGTAGTAGTAGTGTCGAGGCTTGGATGCCGTCGATGGCTTTGACATTAGA
ATTGTTATTGAAGTGCCGGTTATTCCCCCACTCCGCCGTTCCCGATACGT
AACACAAAAGGGTGTGAAAACACTGTCTGTGGGATCGAAGTCTTTACCTT
TGGTTGCTGAATATGCGGGTCGTGAAGGTTTGTTTCTCTGTGGAGAAATT
GGTGCTGCCGCTGCGGGAAACCGAAAGTGTTTATAGTCTGTCCTTCTAAC
CATTGGCCTAACCTTGATGAATACGGTGCAGGCAAGGTAGGTCGGATGAC
CTCCGCCACTCAGCCACTACCGGCAAAGTAAGCCTGACTGCTTGCTCGAC
CCTTAACACATGGTATCATTTTACTTGTGTATGCAAGATTTATTATCGAA
GTACGACCCTCGTGCCGATCTCATCGGAAATCGCCCTGTCTTTTTTGTGC
TTCGGGTTCACGCAGGATTTTCGGAGGACGAACCCTCGCTGTTCCGACGA
CGGGCGGTCGAGCTCAAGCACGGCAGGGTATGAAAAAAGTAGGGAAATAT
TGTGAAGAGGGAGAGGGAGAAAGGGAGAGGGAGAGGGGGGGGTGCGGGGA
ATAGACAGAGAGAAAGAGAGTGAGCGAGATGGAGACACAGACAGAGAGAG
ACAGAAGCAGACTAGAAGGGGGGGGGGGGAAGACAGCAATACGAGTTTTG
TCTTGAGGTATGTGGCTTCATCATCCCGTTCCTGCTCATGGCTCGCCTCT
ACTGTTGAGCTGAGCAGACCCGAATGTAAGTCTCCGTTTTCTCCTCCGAC
GGCTGCCTCGGGATGAACAAACAACCCACCTATCCCTACCCCTTCCCGCA
GCCATCCTTGCTGCGGCGCGTGCCAGTTTTACCCTGGTATGTATGATCCG
TCCATCTTCCGTTGAAGCCAAAGTCATTCAAGCACATTTTCCCTGCTGTG
GCCCTTCCTCTTGGCCTGCGGCCAACCGGTGCCGATACTTGCTTGCCGTT
GCGTGCTCGCAACGGCAGTTGCAACAGGAACAGGAACAACCACGCTCTCT
CCCGCCTCATCTGTCTGTGCGCGCGTGCCGAGCAGGTGGCGATGCTTGCC
GTCACGGGCATCGTCGTGCAAACCTTTGTGCGCTTCCCAGGCTTCCCACC
ATTCCCTGTGTCAAACGCAGCGCGCCCTCTGGCAGTGCTGAAAGGGCTCA
TGTCGGACAAAACGAACAGCGTGCTGCTGGCTCTGTTGGTCATTGGGGCG
TTGGAACTCACGATAGGGAAGCAGGTGTGTGTGCGTGTGTGCGTGTGTAC
GAGAGGGTTTCAGCTGGTGCAGCGATAGAGATGCATGCAGAGCGCTGCAT
GACCATATGTCGAGGAATGCTGGGTGACATGGTACCGCCCAGCAGCATTG
TCTTATCGCGTCGGTCGAGTACCACGGGTAGATGACGCAGCAGCACATGT
TGGTTGCTTAGGCTGCAAAAATCCTCTTTTTCACCTCTTTTGTCTGTCTG
TCCGTCTGTCTGTCTGTCTGTCTGTTGTGTCCGCTTGTATTTTTGCAATG
TTTCTTCTTGTGGTCTTTATTTTGTATGAATGCCCCATGTAATTATCTCA
TCCACCCCCTCTCATTCACTTGATTATTCGTGATGTCTGTGTTTTCGGCG
CGTTGGTGTGATTAACGAGTTCGTTCCGAGCCTCGCCGACCTGCCCGTAC
TCAAACCAAACCCTCCGTAAGCAAGAACAAGATGGATATTATAGCAACAA
CGCGTGGCGGGCTCGAGTCATCACGAAGCCAAACCAGCCTTATTCGCGCG
CCGGAATTATAGACTTTCCAAGCCTTTGGGCATTGCCCCCCCTTCCCACC
GCATCTACTGCCCCCCCCCCCCCCCCTCCCCCCCGCGCCGATTATCTTGC
AACGGCGGAAACCTCTTTGTTTTGTTTTCGTCCACCGAAACCGCCCCGAT
CGAACCACAATACTAGGATTACGTGGACAGAGCGCCGGGAGAGCTCGGAG
AGTTTGGGACGTTCGCGAAGCCCGTCGACGAGGACGAGTGGTTTAAGGTG
CAGATGGCCGAGCTGAAACACGGGCGGCTGGCGATGCTGGGTGTGGTGGG
GTGCTTCGTGCAGGAGGCGGTGACGGGACAGGGCCCGGTGGAGCAGCTCT
TGTTGGGAAATGTGCGTTGATCGACGGAGAGAAGAGGGAGAGAGAGATAT
AGAAGAGAAGAGGGCTCATTTTGTTCGACAGGAGGCGTTTGCAAAGGCAA
AGGCACGACGAAAGCGCGAACGACGAGCGTATTTGGTTCCATTCATTGCA
GGCGTCGTCGCCGTTGTCGGTGATGTTGGGCCTTATTGGTATTGTTGGAT
GTCGGGGCGCTGTCCAACGGCACTCTCGACTTGCTCGTGTGTGGTATTCA
CCAAATGTAAACACCAAATCCTCTTCGCGGACGGCGCCCATGGCACCGTA
GCCTCTCCGTCTCTCCTCGCCGCGCCATGCTACACCGTCCACACCAAGAG
CACCTATGTTTTCAGTCCCTCCGCCTGCCCCCAATACGCATCTGTTTGGT
AGGCGAAGACTCGAAGTCCCGCCCATGCCTTGTACGGGGCACACGCGAAT
GTCAATGGTTTAGGCTATGCCGATCAAAAACATTCGATCACCTCTCCACG
TACCCCCCCCCCCCTCTCGCTCCACACTGGGTCTGATCGGTTTGCCCCGT
GTTGCCTTGTTGCACCGCTGCCCCTGCTCTGTTGGCCTGTTTCCGCCTTG
CTGCGATGGATTCCGTTTCGTCTGTTCGTGTGATTGTCACCAGATATCAC
CGTTCTCGTAAGAGAAACAGCAGGAACACATTGGTTGGGATCGTCGTTAC
CGTTGTCGTAGACCGCATTCTACACAGTCTGCTGCAGCCGGTGCGGTGCG
GTGCGGGGCGGCGCGGTGCGGTGGAAGAACGAAGGCCACGAACGCGCGTG
CTCTTCGTTGTTTGTGGCAGGAGTCCGCCAAGTGTGCGGGGCATGGTCGG
CTGGCTAGCTGGTCTGTCTGCTGTCTGTCTGAACTTTTAAGGAGGGTTTG
TGGGCAGGGTCCTCTGTCGTACAAAAGTCATGGGGCGTATTTTACTCTGT
CGTGGTATGGTATGCGTCAAATCGCCGCCTGGAATTCATCCCGAGAGTTC
TTGATGTTAAAGGCGCTACTGCATGTATCCGCCACTGGTGGCTTTTCGTG
AAAGCAGTTGGTGTCGTGTGGTGAAAATAACATGAGTTTGTTTTCAGCAA
GTTTGTGACGGCAACAAGGCAGCAAAGGAGCTACCCCCTCCCCTGTCGTC
CTCATCGTGCCACCGCTGAAGGAGGTGATGTCAGCAGCGGTTGCAAAACA
TGCTGTCACGTGCGGTCGCTGAAAAAACGTTAGAGCAGCGGGCTTAACCC
CAGGCAATGATTGATCGGTTCTGGAGGTGACGGGTGGGCCAGGCCGTTCG
TTGATGGGACCAAGCTACTGGTAGGGCCGGTCAGATCGTTTGACTGGGGC
TGGTGGCTGTTGATGAGAAAATGAGACTCGTGTAAAGGCCACTTTTTTCA
CGTCGCCAGAACCATGCTGGGTGGTATGATGTGATACGATACGACGATCA
TCGTATCTAGTAGCGTGAATCAGGCTTTCGGTGGGCCCAATTGTTGTTAC
TGGGACCGGGGGCAATGGTAGAATAGGGTATTTTCTTTCTGGGCCTGGTG
TGCTTGGAGAGAGGCACAGTCAGGCGCTCGACGACCAAGTGCCTCCTTTT
GCGCGTTTTCTTGTTTTGCGTATCCGTGAAATGGCTTCCGGCAATGACAG
GTGCTGCAGCAGTAGTACAGTAGCTGCGTGCTGTGTGAGTTGCCGGTGTT
GTAGTTGTATGCGCAGAGTTGATTCTGTCGTTTTGGGTGTTTGTATTCGG
TTGGTTTTGCCGTGCGCAATTTACGTGCATCGTTTCTAGGGTCCGTGAAT
ACACATATATATACATACATGCATAGTCGTAAACTCGTACCAGGTATACA
TACTCCGAGTATATTTTTAGGGTGCGACAACATCCCGAGAGAGAAAGGAC
AGATAATGCTCGCAGTTTTTGTAGTGTGGTCAACACCGAAGGTGCTGAAA
CCTGATTGGCCGAAAATCCCTGGCCGGCGGGTGCTGTCAGCCAGGGTCGT
AACTTCCATTTCATTTTATATACAAGTACACTACAGGCTGTTGTACGCTC
GATCTTACAGCTCTTTCAGCATTCCTCTGTTTATTTTTCTTACAAAGACA
TCAACGTATTCGCCCCTCTCTAGACGAATTTACAACATAGATAGGGTGCA
GGTATCGTAGTATCTTTGTCAGCTCGGCGCTTCGGGGAAACTTTGCACGC
ATTTTTTTTTCACGGTCCAGATCAAAGATCCACATGACCGCCCAACTTGT
GTTGCTACTTGAGTATCACACTTCGAAGTTATTCCCAAGCTCCGCTAAGA
GATTGGGCTTTTCTATTCCTAAATTCAAAGTCCACATCACTTTTTTGTGA
CGTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig670:105683..114537+

>mRNA_P-littoralis_Contig670.20.1 ID=mRNA_P-littoralis_Contig670.20.1|Name=mRNA_P-littoralis_Contig670.20.1|organism=Pylaiella littoralis U1_48|type=CDS|length=687bp|location=Sequence derived from alignment at P-littoralis_Contig670:105683..114537+ (Pylaiella littoralis U1_48)
ATGACTCGAGAGGTTGCACTCTTGATCCTGAGCTTCATTGTGAATTGCGG
AGGCTTCACGATACGCAGTAACAGCAGAAAGCTCACCTGCTTCCCCGCGT
TGGACATCTGCGGTCGGGGCGGAGGGAGCAGACATAGATCGTCGTCGTCT
GGGGTGGTGCAGATGTCGATCAGCGAAATGATTGGCGCGGATGTCGAGAG
CGGTGGCGTATTCGATCCGCTCGGATTTTCGGAGGACGAACCCTCGCTGT
TCCGACGACGGGCGGTCGAGCTCAAGCACGGCAGGGTGGCGATGCTTGCC
GTCACGGGCATCGTCGTGCAAACCTTTGTGCGCTTCCCAGGCTTCCCACC
ATTCCCTGTGTCAAACGCAGCGCGCCCTCTGGCAGTGCTGAAAGGGCTCA
TGTCGGACAAAACGAACAGCGTGCTGCTGGCTCTGTTGGTCATTGGGGCG
TTGGAACTCACGATAGGGAAGCAGGATTACGTGGACAGAGCGCCGGGAGA
GCTCGGAGAGTTTGGGACGTTCGCGAAGCCCGTCGACGAGGACGAGTGGT
TTAAGGTGCAGATGGCCGAGCTGAAACACGGGCGGCTGGCGATGCTGGGT
GTGGTGGGGTGCTTCGTGCAGGAGGCGGTGACGGGACAGGGCCCGGTGGA
GCAGCTCTTGTTGGGAAATATATCACCGTTCTCGTAA
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