mRNA_P-littoralis_Contig117.68.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: D7FLQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLQ5_ECTSI) HSP 1 Score: 630 bits (1624), Expect = 1.340e-205 Identity = 475/1041 (45.63%), Postives = 577/1041 (55.43%), Query Frame = 1
Query: 1 MCRRQQNAGEQRFAVQSDRTNPTHWDHFCYTCWHSEAQAGRQAERRGAYDGHGTLGNRGIGGGDGASPGRKTTVISAGESKGKGSQSKKPAKPPSPAAVAAAFREKFPQAPICTPVDDVETRARAAMHPTAATLAIKEKVKNHGADMGELIQEAAMAVFATIHVIVAVYAHEIISFKHLVLTPDGDESVKMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVVHDIDGLVVVVCGKYRCKNPDCKSNIDSAQALAKKAEASGGKKVSEIEWDAEAVRSYCKHGVSFNAMDERYMKLLSAAVVAQLPYRLFKQNGTSERLLDMVRATEGDMQNLRRLLVARDQGQEIRAMQRYLRFVLEGQATEKSRTRLDGKFTKWSRWRFNHGTLISTPSVAVLNTFYRAGHVQDKDHMLCEIISEGDGEFVNGDGTFRAAGRVMDDSGCHYFVMGDDGKIQAYVAVKSESEVEILPLFKGYAKRREKKTRCTKCGGFTTITVAD*LLTRQSTLQSKASLRCGELHLLMRFTRYRILLVQP-LRRATNEGLTTRRRWGQLSASNTRLT*KP*LST*WRERTKS*RQRRQNGGLDPRPCPGMCARFLARCKKR*LSFGRWLPCTQRSTCKDGGRASCRYFNWSCRRGGEGRAARFQCWTVSSTAWKRDVDKTRWTSMAFPPFLISVYRPHRS*NKVLPPLPLARTSF------------------SSLXXXXXXXXXXXXXXXWL*GTSTSARGRRRN*RR-TTREEALARTRRSTATST*L*PASLVSARTYATSASCNSFIATTSKGTKSLAAQASNPLCGYGGSGSSNAAKECLVAEPFPKAGPRPDVQKADLDAEPMGFEYATRLRKDRL*GCRHTATTIVGVGRGGAKQEPSISSRPLLPMRLTTVPETGVAGGTGTGGGETSGAGISGVRAQDSRAGAAAXXXXXXXXXXXXXXXXXXXXXXXXA*P------SNVG-----------------SSVAGLNTLGEGAAGEPPENIGGERTRPMRRQTVESAVCHSHKPRRVGLLG 2994
MC R QN G+ R AV+S NPT +DHFC TCW SE Q ERRGA++ HGTL +R G G SKGKG A+ PSPAAVAAAFREKFPQAP+CTPV+ VE RAR AMHPTAAT A+ + GADMGEL++EAAMA FATIHV VA+Y HE V T G+ V+MICPSCLTNEFVETPGVSGNGFPSVSSQKIRV HDI G+VV V GKYRCKNP C N+ SA+ A+KAE +GG K SEI WD AV S+CK+GV+FN MD RYM+LL AAVVA+LPYR FKQN TSERLLDMV ATEGD RLLVARDQGQE+R MQRY+RF E QA E+ R+RLDG+FTKW WRFN GTLISTPSVAVLNT +A H+QD+DHML E+I++ GEFVN DGTFRAAG+VMD++ C YF+MG+D KI Y AVKSESE E+ LF+ YA RR KK L + + C ++ T+Y + + P + RA A + T QN + ++ +R + R + + RS K A Y +R A R + + S + + R V + ++A ++ ++ + + LPL + S L GT + +R + T + E+ R+ + +S + R N K K A + L + ++AA++CLVAEPFPKAGPRPDVQ+ DLDAEPMGFEYA RLR+DRL CR A +VGVG G E ++S PL RL TVPET V GG GGGE SGAG SGV QDS AG+AA XXXXXXXXXXXXXXXXXXXXXX S+ G S A GEGA G EN+GG R RPMR+ T + KP++ L G
Sbjct: 1 MCFRTQNPGDLRTAVRSAE-NPTKFDHFCSTCWRSE----EQLERRGAHNSHGTLEDRAASQATGGXXXXXXXXXXTGNSKGKGPA----ARHPSPAAVAAAFREKFPQAPLCTPVEGVEARARVAMHPTAATAAMSRAATDGGADMGELLREAAMAAFATIHVAVALYVHE-------VKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVHVFGKYRCKNPACALNVRSARKSAEKAEKNGGPKASEIVWDDAAVTSHCKNGVAFNTMDTRYMQLLPAAVVAKLPYRFFKQNITSERLLDMVSATEGDTPGFHRLLVARDQGQELRDMQRYIRFAEEEQARER-RSRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMDEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKGT---------------LHALRWLYDDRCCRGCKDV------TKYYGVQIFPHVERAP-------------LADSFHAT--------------------QN----------LAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAVVEYLMRENKRMTRAEAER-KAKSKSMSRYVRTVSRPIEETIAEVSEVVRLHARLDAEGRERGELPLLQPELPPGKRGPRGAQAELNSLISCLRKGCGQDPLPVDKMYLHVGTGKKTKLKRYVKKGGTAKNESFHRSLNAMTSSVSRLGPGVCDQRLLQLVYRFN-----LDKDRKLGRASKHSTLWVWRERDINDAARKCLVAEPFPKAGPRPDVQQEDLDAEPMGFEYAKRLREDRLGACRQAAMHMVGVGSGAPVPESGVNSPPL---RLATVPETAVQGGRDAGGGEGSGAGASGVHGQDSGAGSAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASSAGIXXXXXXXXXXXXXXXXSDTAEHGAAGEGATGRASENLGGARRRPMRKNTSRGSGASLLKPKQWWLAG 951
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: D8LRE7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE7_ECTSI) HSP 1 Score: 578 bits (1491), Expect = 1.540e-181 Identity = 456/995 (45.83%), Postives = 541/995 (54.37%), Query Frame = 1
Query: 271 AKPPSPAAVAAAFREKFPQAPICTPVDDVETRARAAMHPTAATLAIKEKVKNHGADMGELIQEAAMAVFATIHVIVAVYAHEIISFKHLVLTPDGDESVKMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVVHDIDGLVVVVCGKYRCKNPDCKSNIDSAQALAKKAEASGGKKVSEIEWDAEAVRSYCKHGVSFNAMDERYMKLLSAAVVAQLPYRLFKQNGTSERLLDMVRATEGDMQNLRRLLVARDQGQEIRAMQRYLRFVLEGQATEKSRTRLDGKFTKWSRWRFNHGTLISTPSVAVLNTFYRAGHVQDKDHMLCEIISEGDGEFVNGDGTFRAAGRVMDDSGCHYFVMGDDGKIQAYVAVKSESEVEILPLFKGYAKRREKKTRCTKCGGFTTITVAD*LLTRQSTLQSKASLRCGELHLLMRFTRYRIL----LVQPLRRATNEGLTTRRR-WGQLSASNTRLT*KP*LST*----WRERTKS*RQRRQNGGLDP----------RPCPGMCARF--LARCKKR*LSFGRW---LPCTQRSTC--KDGGRASCRYFNW--SCRRGGEGRAARFQCWTVSSTAWKRDVDKTRWTSMAFPPFLISVYRPHRS*NKVLPPLPLARTSFSSLXXXXXXXXXXXXXXXWL*GTSTSARGRRRN*RR-TTREEALARTRRSTATST*L*PASLVSARTYATSASCNSFIATTSKGTKSLAAQASNPLCGYGGSGSSNAAKECLVAEPFPKAGPRPDVQKADLDAEPMGFEYATRLRKDRL*GCRHTATTIVGVGRGGAKQEPSISSRPLLPMRLTTVPETGVAGGTGTGGGETSGAGISGVRAQDSRAGAAAXXXXXXXXXXXXXXXXXXXXXXXXA*P--------SNVG---------------SSVAGLNTLGEGAAGEPPENIGGERTRPMRRQTVESAVCHSHKPRRVGLLGWSDCYCIGTGCSRDKVARRCGEGLQHTVLFPTVFD 3099
A+ PSPAAVAAAFREKFPQAP+CTPV+ VE RARAAMHPTAAT A+ + GADMGEL++EAAMA FATIHV VA+Y HE V T G+ V+MICPSCLTNEFVETPGVSGNGFPSVSSQKIRV HDI G+VV V GKYRCKNP C N+ SA+ A+KAE +GG K SEI WD AV S+CK+GVSFN MD RYM+LL AAVVA+LPYR FKQNGTSERLLDMV ATEGD RLLVAR+QGQE+R MQRY+RF E QA E+ R+RLDG+FTKW WRFN GTLISTPSVAVLNT +A H+QD+DHML E+I++ GEFVN DGTFRAAG+VM+++ C YF+MG+D KI Y AVKSESE E+ LF+ YA RR KK T+ L + K + + + R + Q L AT RR + + + R KP + RE + R + RP A + R R + GR LP Q K G R + N SC R G G+ VDK XXXXXX GT + +R + T + E+ R+ + +S + R N K K A + L + ++AA++CLVAEPFPKAGPRPDVQ+ DLDAEPMGFEYA RLR+DRL CR A +VGVG G E ++S PL RL TVPET V GG GGGE SGAG SGV QDS AG+AA XXXXXXXXXXXXXXXXXXXXXX + +G S A GEGA G EN+GG R RPMR+ TVE C + + C VA GEG+ + + P D
Sbjct: 184 ARHPSPAAVAAAFREKFPQAPLCTPVEGVEARARAAMHPTAATAAMSRAATDGGADMGELLREAAMAAFATIHVAVALYVHE-------VKTNGGEVGVRMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVAHDIHGVVVPVFGKYRCKNPACALNVRSARQSAEKAEKNGGPKASEIVWDDAAVTSHCKNGVSFNTMDTRYMQLLPAAVVAKLPYRFFKQNGTSERLLDMVSATEGDTPGFHRLLVAREQGQELRDMQRYIRFAEEEQARER-RSRLDGEFTKWPGWRFNRGTLISTPSVAVLNTINKAAHLQDRDHMLRELIAQVAGEFVNSDGTFRAAGKVMNEAQCLYFLMGEDAKILGYGAVKSESEEELTLLFQRYADRRRKKG---------TLHALRWLYDDRCCRVCKDVTKYYGVQIFPHVERAPLADSFHATQNLAGATTSKSHERRGVYARGVGGSVRSKYKPDVDAIVEYLMRENKRMTRAEAERKAESKSMSRYVRTVSRPIEETIAEVSEVVRLHARLDAEGRERGELPLLQPELPPGKRGPRGAQAELNSLISCLRKGCGQDP-------------LPVDKMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMYLHV-------GTGKKTKLKRYVKKGGTAKNESFHRSLNAMTSSVSRLGPGVCDQRLLQLVHRFN-----LDKDRKLGRASKHSTLWVWRERDINDAARKCLVAEPFPKAGPRPDVQQEDLDAEPMGFEYAKRLREDRLGACRQAAMHMVGVGSGAPVPESGVNSPPL---RLATVPETAVQGGRDAGGGEGSGAGASGVHGQDSGAGSAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGIGAXXXXXXXXXXXXXXSDTAEHGAAGEGATGRASENLGGARRRPMRKNTVEGQRCFTPQTEAE------------VACWSQAVAETIGEGVSPSKVVPKAVD 1121
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: D8LRE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRE6_ECTSI) HSP 1 Score: 258 bits (660), Expect = 2.040e-72 Identity = 154/396 (38.89%), Postives = 215/396 (54.29%), Query Frame = 1
Query: 283 SPAAVAAAFREKFPQAPICTPVDDVETRARAAMHPTAATLAIKEKVKNHGADMGELIQEAAMAVFATIHVIVAVYAHEIISFKHLV------LTPDGDESVKMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVVHDIDGLVVVVCGKYRCKNPDCKSNIDSAQALAKKAEASGGKKVSEIEWDAEAVRSYCKHGVSFNAMDERYMKLLSAAVVAQLPYRLFKQNGTSERLLDMVRATEGDMQNLRRLLVARDQGQEIRAMQRYLRFVLEGQATEKSRTRLDGKFTKWSRWRFNHGTLISTPSVAVLNTFYRAGHVQDKDHMLCEIISEGDGEFVNGDGTFRAAGRVMDDSGCHYFVMGDDGKIQAYVAVKSESEVEILPLFKGYAKRREKKTRCT 1452
SP AAAF+ +FP +P+C P++ VETRA AM P+AAT A++++ K D+G ++EAAMA FATI V +A Y HE+I F+ LV + G V+MICP C +N+FV+ PGVSG+GFP + + K+RV HD+ G+VV V G+Y C P C ++SA+ A + ++ V++ WD + ++ +C +GVSFN MDE KQ + A G T W W+FN ++ +TPSVAVLNT Y AGH +DK HM E++S DG+FVN DG++R GR D+ C Y +M +D KI AY A+KSES+VE LPL+K YA+RR + T
Sbjct: 89 SPRLEAAAFKRRFPNSPVCKPLESVETRAIEAMQPSAATGAMQDRPKKDE-DLGHRLREAAMATFATIDVEIAPYVHEVIFFEELVRDDRFKVNTRGGAGVRMICPGCKSNKFVKPPGVSGHGFPCMGA-KLRVAHDVAGVVVPVTGRYACLGPGCPLRLESAKRSAARKKSV----VADDGWDEDTIKKHCPNGVSFNTMDES------------------KQQEIERK------AGRGP--------------------------------------------TPWPPWKFNRSSITATPSVAVLNTIYAAGHEEDKGHMHRELLSLVDGQFVNADGSYRLIGRANHDAHCLYSLMREDAKIHAYGALKSESKVETLPLYKRYAERRRRSGTLT 410
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: A0A6H5KXX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX1_9PHAE) HSP 1 Score: 152 bits (383), Expect = 2.200e-36 Identity = 117/384 (30.47%), Postives = 170/384 (44.27%), Query Frame = 1
Query: 286 PAAVAAAFREKFPQAPICTPVDDVETRARAAMHPTAATLAIKEKVKNHGADMGELIQEAAMAVFATIHVIVAVYAHEIISFKHLVLTPDGDESVKMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVVHDIDGLVVVVCGKYRCKNPDCKSNIDSAQALAKKAEASGGKKVSEIEWDAEAVRSYCKHGVSFNAMDERYMKLLSAAVVAQLPYRLFKQNGTSERLLDMVRATEGDMQNLRRLLVARDQGQEIRAMQRYLRFVLEGQATEKSRTRLDGKFTKWSRWRFNHGTLISTPSVAVLNTFYRAGHVQDKDHMLCEIISEGDGEFVNGDGTFRAAGRVMDDSGCHYFVMGDDGKIQAYVAVKSESEVEILPLFKGYAKRREK 1437
P VAAAF +FP APIC P D +E RA AAM T A+ +V+N G + L++E+ MAVFAT V+ A+Y HE++ + LV G P++ ++ C ++SA+ A K + +++ WD +R +C +G SF MD+RYM+L +V++LP+R F+QNGTSE LLD VRATEGD+Q+ H ST S+ + R I S+ G+F+ DGT+R RV+D C +F++G+D K+ AY AV+SE + EI L K YA+RR +
Sbjct: 68 PKYVAAAFNRRFPDAPICRPADSLEKRAAAAMKAAKVTPAMSARVEN-GEIIDVLLKESVMAVFATTQVVFALYVHEVVFLEELV------------------------------GIPAIQAR-------------------------CPLVLESAKKAANKKKVV----IADDGWDEATIREHCPNGGSFTTMDDRYMQLPPEEIVSRLPFRYFRQNGTSETLLDQVRATEGDLQDK------------------------------------------------EHMQRESTRSMGGSSCAXR-------------IHSQYRGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHAYGAVQSERKEEIYLLLKRYAERRRR 330
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: A0A6H5JTJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ4_9PHAE) HSP 1 Score: 143 bits (361), Expect = 6.160e-34 Identity = 89/236 (37.71%), Postives = 124/236 (52.54%), Query Frame = 1
Query: 286 PAAVAAAFREKFPQAPICTPVDDVETRARAAMHPTAATLAIKEKVKNHGADMGELIQEAAMAVFATIHVIVAVYAHEIISFKHLVLTPDGDESVKMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVVHDIDGLVVVVCGKYRCKNPDCKSNIDSAQALAKKAEASGGKKVSEIEWDAEAVRSYCKHGVSFNAMDERYMKLLSAAVVAQLPYRLFKQNGTSERLLDMVRATEGDMQ 993
P VA AF +FP APIC D E RA AAM T A+ +V+ G + L++E AMAVFAT V+ A++ HE+++ TP G + V+MICP C +N V+ GVSG+ FP+ ++K ++ N+ V++ WD +R +C +G S MD+ YM+LL V++LP+R F QNGTSE LLD VRATEGD+Q
Sbjct: 104 PKCVAVAFYRRFPDAPICRRADSPEKRAAAAMKAAKVTPAMSTRVEK-GDIIDVLLKEPAMAVFATTQVVFALHVHEVVT------TPGGAKGVRMICPGCKSNSEVKPLGVSGHDFPNGGARKA------SRTFAGALSSWKVPRRRPTKNVV----------------VADDGWDEATIREHCPNGASCTVMDDTYMQLLPEETVSRLPFRYFSQNGTSETLLDQVRATEGDLQ 310
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: A0A6H5KNQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNQ6_9PHAE) HSP 1 Score: 137 bits (344), Expect = 1.040e-32 Identity = 77/161 (47.83%), Postives = 101/161 (62.73%), Query Frame = 1
Query: 955 LLDMVRATEGDMQNLRRLLVARDQGQEIRAMQRYLRFVLEGQATEKSRTRLDGKFTKWSRWRFNHGTLISTPSVAVLNTFYRAGHVQDKDHMLCEIISEGDGEFVNGDGTFRAAGRVMDDSGCHYFVMGDDGKIQAYVAVKSESEVEILPLFKGYAKRREK 1437
LLD VRA EGD+Q RR L A DQG+E+R M+RY+ F EK G + W W+F GTL+ TPSVAVLNT Y AGH ++KD+M I +E +G+ VN DGT+R RV C YF++G++ K+ Y A+ SES+ E+ PLF YA RR +
Sbjct: 2 LLDQVRAMEGDLQVYRRALAAGDQGRELRDMRRYMSFA------EKH-----GDGSLWPGWKFVRGTLVGTPSVAVLNTIYNAGHDEEKDYMRRVIQAECEGQIVNMDGTWRIGLRVPGVPACLYFLLGENAKVHDYGAITSESKSELRPLFMRYADRRRR 151
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: A0A6H5KHD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD6_9PHAE) HSP 1 Score: 134 bits (337), Expect = 2.200e-31 Identity = 70/150 (46.67%), Postives = 100/150 (66.67%), Query Frame = 1
Query: 988 MQNLRRLLVARDQGQEIRAMQRYLRFVLEGQATEKSRTRLDGKFTKWSRWRFNHGTLISTPSVAVLNTFYRAGHVQDKDHMLCEIISEGDGEFVNGDGTFRAAGRVMDDSGCHYFVMGDDGKIQAYVAVKSESEVEILPLFKGYAKRREK 1437
M+ RR+LVA +QG+E+R M RY+RF + ++ E + W W+F+ GTLISTPS+AVLNT ++AGH DK+HM EI S+ G+F+ DGT+R RV+D C +F++G+D K+ AY AV+SE + EI L K YA+RR +
Sbjct: 1 MKTYRRILVAGEQGRELREMHRYIRFAAKHRSAEHA---------LWPGWKFSRGTLISTPSIAVLNTIFKAGHDNDKEHMQREIHSQYGGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVPAYGAVQSERKEEIYLLLKRYAERRRR 141
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: A0A6H5KRD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRD1_9PHAE) HSP 1 Score: 132 bits (333), Expect = 2.250e-30 Identity = 84/235 (35.74%), Postives = 118/235 (50.21%), Query Frame = 1
Query: 289 AAVAAAFREKFPQAPICTPVDDVETRARAAMHPTAATLAIKEKVKNHGADMGELIQEAAMAVFATIHVIVAVYAHEIISFKHLVLTPDGDESVKMICPSCLTNEFVETPGVSGNGFPSVSSQKIRVVHDIDGLVVVVCGKYRCKNPDCKSNIDSAQALAKKAEASGGKKVSEIEWDAEAVRSYCKHGVSFNAMDERYMKLLSAAVVAQLPYRLFKQNGTSERLLDMVRATEGDMQ 993
A ++ A +FP APIC P D E RA AAM T A+ +V+N G + L++E+AMAVFAT V+ A+Y HE+ IR V D+ +VV + G+Y C C ++SA+ A + +++ EWD +R +C +G F MD+RYM LL +V++LP+R F+QNGTSE LLD VRATEGD+Q
Sbjct: 5 ARLSTAIYRRFPDAPICRPADSPEKRAAAAMKAAKVTPAMSTRVEN-GEIIDVLLKESAMAVFATTQVVFALYVHEV----------------------------------------------IRAVPDVGRVVVPLAGRYSCTASGCPLVLESAKKPANTKKVV----IADDEWDEATIREHCPNGGFFTTMDDRYMHLLPEEIVSRLPFRYFRQNGTSETLLDQVRATEGDLQ 188
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: A0A6H5L4Z6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z6_9PHAE) HSP 1 Score: 135 bits (339), Expect = 4.930e-29 Identity = 87/221 (39.37%), Postives = 114/221 (51.58%), Query Frame = 3
Query: 1731 EAERRARSKAMSRYVCTISRPVQETVAKLRKVVTLHATLDVQGRRQGELPLLQLELPAGRRGSRGAFSVLDSLIHCMEKGCGQDPLDVDGIPTFSYFCLQAPSFVKQSPPSLASCAHFLLVSLXXXXXXXXXXXXXXXXXXXXXXXKGKKTKLTTYNKRGGTGKNEAFHRNLNLVVTSVSRLGPDVRDQRVLQLVHRYNFQRDKKLGRTSKQSTLWVWRER 2393
EAE A+ +A S +V T SRP QE L K V + LD + ELPLL+ +LP G+ G GA + L+ L+ C+ +GCGQDP DV+ + Y L +G KT L ++K+GGTGKNE FH +N +V V+RLG + D R+LQ +HR+N D+KLGRTSKQSTLWVWRER
Sbjct: 5 EAEVMAKKRAWSPFVRTYSRPAQEVEDDLVKYVGDYVKLDQAAIARKELPLLRPDLPPGKSGPIGAMAALNKLVKCLREGCGQDPFDVNQM----YIPL----------------------------------------------GRGPKTGLMRWSKKGGTGKNENFHGGINRLVNGVARLGAEACDARLLQRIHRHNHDMDRKLGRTSKQSTLWVWRER 175
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 135 bits (339), Expect = 3.690e-28 Identity = 70/150 (46.67%), Postives = 100/150 (66.67%), Query Frame = 1
Query: 988 MQNLRRLLVARDQGQEIRAMQRYLRFVLEGQATEKSRTRLDGKFTKWSRWRFNHGTLISTPSVAVLNTFYRAGHVQDKDHMLCEIISEGDGEFVNGDGTFRAAGRVMDDSGCHYFVMGDDGKIQAYVAVKSESEVEILPLFKGYAKRREK 1437
M+ RR+LVA +QG+E+R M RY+RF + ++ E + W W+F+ GTLISTPS+AVLNT Y+AGH DK+HM EI S+ G+F+ DGT+R RV+D C +F++G+D K+ +Y AV+SE + EI L K YA+RR +
Sbjct: 1 MKTYRRILVAGEQGRELREMHRYIRFAAKHRSAEHA---------LWPGWKFSRGTLISTPSIAVLNTIYKAGHDDDKEHMQREIHSQYGGQFLCMDGTWRIGLRVIDSPDCLFFLLGEDAKVHSYGAVQSERKEEIYLLLKRYAERRRR 141 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig117.68.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig117.68.2 >prot_P-littoralis_Contig117.68.2 ID=prot_P-littoralis_Contig117.68.2|Name=mRNA_P-littoralis_Contig117.68.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=497bp MCRRQQNAGEQRFAVQSDRTNPTHWDHFCYTCWHSEAQAGRQAERRGAYDback to top mRNA from alignment at P-littoralis_Contig117:238421..244495- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig117.68.2 ID=mRNA_P-littoralis_Contig117.68.2|Name=mRNA_P-littoralis_Contig117.68.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6075bp|location=Sequence derived from alignment at P-littoralis_Contig117:238421..244495- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig117:238421..244495- >mRNA_P-littoralis_Contig117.68.2 ID=mRNA_P-littoralis_Contig117.68.2|Name=mRNA_P-littoralis_Contig117.68.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1491bp|location=Sequence derived from alignment at P-littoralis_Contig117:238421..244495- (Pylaiella littoralis U1_48)back to top |