prot_P-littoralis_Contig67.71.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig67.71.1
Unique Nameprot_P-littoralis_Contig67.71.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length68
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig67.71.1 vs. uniprot
Match: A0A6H5KRS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS3_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 6.060e-31
Identity = 56/68 (82.35%), Postives = 60/68 (88.24%), Query Frame = 0 
Query:    1 MEEFLGFVETMEEV-ESGGGAFATLNCGKDFLREDRTEKFPNVAAVMENMPAEEGSFLRVPKVGEDEG 67
            MEEFLGFVETMEEV E+  GAFATLNCG DFLRED  E+F NVAAVMENMP EEG++LRVPKVGEDEG
Sbjct:    1 MEEFLGFVETMEEVAEASDGAFATLNCGSDFLREDSAERFSNVAAVMENMPIEEGNYLRVPKVGEDEG 68
[Close]
BLAST of mRNA_P-littoralis_Contig67.71.1 vs. uniprot
Match: D7FKR2_ECTSI (Glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR2_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 1.480e-28
Identity = 53/68 (77.94%), Postives = 60/68 (88.24%), Query Frame = 0 
Query:    1 MEEFLGFVETMEEV-ESGGGAFATLNCGKDFLREDRTEKFPNVAAVMENMPAEEGSFLRVPKVGEDEG 67
            MEEFLGFVETM+EV E+  GAFATLNCG DFLRED  ++F NVAA+MENMP EEG++LRVPKVGEDEG
Sbjct:   96 MEEFLGFVETMKEVAEASDGAFATLNCGSDFLREDSADRFSNVAAIMENMPIEEGNYLRVPKVGEDEG 163
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.71.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRS3_9PHAE6.060e-3182.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FKR2_ECTSI1.480e-2877.94Glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amido... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003837Glu-tRNAGln amidotransferase C subunitPFAMPF02686Glu-tRNAGlncoord: 1..59
e-value: 5.8E-6
score: 26.5
IPR036113Glu-tRNAGln amidotransferase superfamily, subunit CSUPERFAMILY141000Glu-tRNAGln amidotransferase C subunitcoord: 2..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig67contigP-littoralis_Contig67:443641..443844 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig67.71.1mRNA_P-littoralis_Contig67.71.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig67 438346..445165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig67.71.1 ID=prot_P-littoralis_Contig67.71.1|Name=mRNA_P-littoralis_Contig67.71.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=68bp
MEEFLGFVETMEEVESGGGAFATLNCGKDFLREDRTEKFPNVAAVMENMP
AEEGSFLRVPKVGEDEG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003837Asp/Glu-ADT_csu
IPR036113Asp/Glu-ADT_sf_sub_c