prot_P-littoralis_Contig67.38.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig67.38.1
Unique Nameprot_P-littoralis_Contig67.38.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length217
Homology
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: D8LKC5_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKC5_ECTSI)

HSP 1 Score: 397 bits (1021), Expect = 1.760e-139
Identity = 195/216 (90.28%), Postives = 206/216 (95.37%), Query Frame = 0
Query:    1 MKSAIAALALGAAGANAFVTPNAVVGRVATRSARQVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSNQFH 216
            MKSAIAALALGA G+NAFVTPNAVVGRVA+RSARQVSMAADPDASIALPFT RP NLNGELVGDVGFDPL FSEEGDL K+RRAELKHGRVAMLGVVG IWQEFSVLPGLGY PTKNLFQA++DAPWLA+LQ+ VFVGIFD++STKYD EQGRVPGDIGFDPLKLSKDGINEKWAL+ELKHGRLAMWAMAAIL+QQLLVPDKSPLELTYEWS QFH
Sbjct:    1 MKSAIAALALGAVGSNAFVTPNAVVGRVASRSARQVSMAADPDASIALPFTPRPENLNGELVGDVGFDPLNFSEEGDLAKYRRAELKHGRVAMLGVVGAIWQEFSVLPGLGYTPTKNLFQAVADAPWLAVLQVVVFVGIFDLQSTKYDIEQGRVPGDIGFDPLKLSKDGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELTYEWSTQFH 216          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A835YVN7_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN7_9STRA)

HSP 1 Score: 244 bits (624), Expect = 5.280e-79
Identity = 133/220 (60.45%), Postives = 165/220 (75.00%), Query Frame = 0
Query:    1 MKSAIAALALGAAGANAFV--TPNAVVGR---VATRSARQVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSNQF 215
            MK+  A LAL AA A AFV   P+A+       A ++  +VS + D + S++LPF  +P NLNGELVGDVGFDPL FS++GDL KFRRAELKHGRVAMLGV+G I QE   + G  ++ TKNLF A++DA  LA+LQ+F FVG +DV +TK++E  GRVPGDIGFDPL+LSKDGINE WALSELKHGRLAM AM A L+Q L+ P+KS LE T++W+  F
Sbjct:    1 MKAVAALLAL-AAPAAAFVPVAPSALPATQLAAAKQTMSEVS-SGDDERSVSLPFAAKPANLNGELVGDVGFDPLRFSDKGDLAKFRRAELKHGRVAMLGVLGSILQESYSVQGPDFKTTKNLFAAVTDAGPLALLQVFAFVGAYDVATTKWEEANGRVPGDIGFDPLRLSKDGINETWALSELKHGRLAMIAMFAFLIQTLVEPNKSILEQTFDWARSF 218          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A7S1U1W6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1W6_9STRA)

HSP 1 Score: 187 bits (476), Expect = 8.220e-57
Identity = 102/205 (49.76%), Postives = 132/205 (64.39%), Query Frame = 0
Query:    8 LALGAAGANAFVTPNAVVGRVATRSARQVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWS 212
            +AL A  + A   P  V GR       Q++MAAD  A  A+PF  +P NLNGEL GD+GFDP  FS+  DL   R AELKHGRV ML   G++ QE + L      P+ N  +A+  AP L I+QI + +G  + +++ Y    GRVPGD GFDPLKLS++GINEKWAL ELKHGRLAMWA A +LVQ L+ PD   ++ T++W+
Sbjct:    6 VALAALASAAAFAPARVGGR------GQMAMAADKSA--AIPFADKPENLNGELAGDIGFDPFRFSDSRDLAYLREAELKHGRVCMLAATGILTQEVTRLSDA--FPSTNCLEALKTAPTLGIIQIILVIGALEAQNSNY---VGRVPGDRGFDPLKLSENGINEKWALMELKHGRLAMWATAGMLVQTLVNPDVPIIQQTFDWA 197          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: W7TNE9_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNE9_9STRA)

HSP 1 Score: 186 bits (473), Expect = 4.190e-52
Identity = 104/202 (51.49%), Postives = 133/202 (65.84%), Query Frame = 0
Query:   15 ANAFVTPNAVVGRVATRSARQVSMAADPDA-SIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYE-----PTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYE 210
            A+AF+ P  +  R   R         D +  SIALPF  +P NLNGEL GDVGFDP  FS++GD+ KFR AELKHGRVAML VVGV+ QE        Y+     P+KN  +A+  AP L +LQ+FVF+G +DV ++K++   GRVPGDIGFDPL+LS DG+ E W ++ELKHGRLAM A  A +VQ   + DK  LE T++
Sbjct:   13 ASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQEL-------YQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFE---GRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQAS-ISDKPILEQTFD 203          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: K8YRV9_NANGC (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRV9_NANGC)

HSP 1 Score: 175 bits (444), Expect = 5.690e-52
Identity = 100/207 (48.31%), Postives = 129/207 (62.32%), Query Frame = 0
Query:   15 ANAFVTPNAVVGRVATRSARQVSMAADPDA-SIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYE-----PTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSNQF 215
            A+AF+ P  +  R   R         D +  SIALPF  +P NLNGEL GDVGFDP  FS++GD+ KFR AELKH        VGV+ QE        Y+     P+KN  +A+  AP L +LQ+FVF+G +DV ++K++   GRVPGDIGFDPL+LS DG+ E W ++ELKHGRLAM A  A +VQ   + DK  LE T+EW+  F
Sbjct:   13 ASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKH--------VGVLVQEL-------YQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFE---GRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQAS-ISDKPILEQTFEWAKSF 200          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A0G4GWW0_VITBC (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A0G4GWW0_VITBC)

HSP 1 Score: 169 bits (427), Expect = 5.170e-49
Identity = 87/178 (48.88%), Postives = 116/178 (65.17%), Query Frame = 0
Query:   35 QVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWS 212
            Q+SM  D + S+ALPF ++P NLNGELVGDVGFDP GF+   DL + R  ELKHGRV ML  +GV+ Q  S        P+KN  +A   AP L ++Q+ + +   +  +  +    GR+PGD GFDPL+LS++GI E W L ELKHGRLAM     ++VQQLL PD+S +E+T  W+
Sbjct:   41 QISM-QDIEKSVALPFARKPDNLNGELVGDVGFDPFGFTNNQDLARMREVELKHGRVCMLATLGVLVQ--STYRWNEAFPSKNFLEAPLTAPTLGMIQLLLVISAIEYYNGNF---VGRIPGDRGFDPLRLSREGIRENWQLMELKHGRLAMIGFLGMVVQQLLRPDESIVEMTINWA 212          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A8J5XNK9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNK9_DIALT)

HSP 1 Score: 152 bits (384), Expect = 6.840e-43
Identity = 94/201 (46.77%), Postives = 117/201 (58.21%), Query Frame = 0
Query:   14 GANAFVTPNAVVGRVATRSAR-QVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGD---LKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYE 210
            GA AF  P      +A RS R  V M  + D S A+PF  +P NLNGEL+ D+GFDP GF+ +     + KFR AELKHGRV ML V+G + QE             N   AI+  P L ILQI V  GI + ++  Y    GR+PGDIGFDPL LS  GI E WA++E+KHGRLAM A  A  VQ + V  +S L  T++
Sbjct:    8 GALAFQGP-----MLAGRSPRGAVRMVTEDDLSAAIPFVAKPKNLNGELLCDIGFDPAGFTNKASPEKIAKFREAELKHGRVCMLAVLGFVAQELIAPYQAAPFNEVNPINAIAAVPALGILQIIVLCGIIENRTQGY---AGRIPGDIGFDPLGLSAGGIKEDWAIAEIKHGRLAMIAFLAFQVQ-IKVSGESVLSTTFD 199          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A0G4FN06_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FN06_9ALVE)

HSP 1 Score: 146 bits (369), Expect = 7.010e-40
Identity = 77/165 (46.67%), Postives = 105/165 (63.64%), Query Frame = 0
Query:   53 RPLN-----LNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWS 212
            RPL+       G+L GD+G+DPL  +E GD+ + R AEL+HGR+AML  +GV+ Q         + P+KN   A+  AP L I QIF  +G ++ K+  Y+   GR+PGD GFDPL LSK+GI  +W  SEL+HGRLAM+    +LVQQLL P +S +E T  W+
Sbjct:   83 RPLDAPYQLFGGDLAGDLGWDPLNLAEGGDIVQLREAELRHGRLAMLATLGVLVQSTYRWDSENF-PSKNFLDALFTAPPLGIFQIFAAIGWWEFKNKDYE---GRIPGDRGFDPLGLSKNGIRPQWEKSELEHGRLAMFMFLGMLVQQLLSPKESIVEQTISWT 243          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A7S1TZN6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZN6_9STRA)

HSP 1 Score: 132 bits (333), Expect = 4.500e-36
Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 0
Query:   84 AELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWS 212
            AELK GRV ML   G++ QE + L      P+ N  +A+  AP L I+QI + +G  + +++ Y    GRVPGD GFDPLKLS++GINEKWAL ELKHGRLAMWA A +LVQ L+ PD   ++ T++W+
Sbjct:    9 AELKQGRVCMLAATGILTQEVTRLSDA--FPSTNCLEALKTAPTLGIIQIILVIGALEAQNSNY---VGRVPGDRGFDPLKLSENGINEKWALMELKHGRLAMWATAGMLVQTLVNPDVPIIQQTFDWA 132          
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: L1IG04_GUITC (Light-harvesting Chl a protein 2 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IG04_GUITC)

HSP 1 Score: 133 bits (335), Expect = 2.200e-35
Identity = 88/200 (44.00%), Postives = 110/200 (55.00%), Query Frame = 0
Query:    6 AALALGAAGANAFVTPNAVVGRVATRSARQVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEE------QGRVPGDIGFDPLKLSKD-GINEKWALSELKHGRLAMWAMAAILVQQLL 198
            A L L AA + +   P A+  R A  S + + M    D S A+PF  RP  L+G + GDVGFDPLGFS   DLK  R AELKHGRV MLG +G + QE   LP  G+   K   +A    P   + QIF  +G  ++ S             GR PGD+GFDPL LS D     ++ L+ELKHGRLAM  +  +L QQLL
Sbjct:    4 AILVLAAAASASAFAPAALPTRAARSSTQGLKM---QDRSYAVPFLSRPPALDGTMAGDVGFDPLGFSNYFDLKWLREAELKHGRVCMLGTLGFLVQEKFQLPLPGFGE-KLPIEAFFTVPTGGLWQIFFTLGAIEILSNNGRISPGDMFADGRAPGDLGFDPLNLSSDESALRRFELAELKHGRLAMIGLGGMLHQQLL 199          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKC5_ECTSI1.760e-13990.28Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835YVN7_9STRA5.280e-7960.45Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A7S1U1W6_9STRA8.220e-5749.76Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TNE9_9STRA4.190e-5251.49DNA-directed RNA polymerase subunit n=1 Tax=Nannoc... [more]
K8YRV9_NANGC5.690e-5248.31Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
A0A0G4GWW0_VITBC5.170e-4948.88Uncharacterized protein n=3 Tax=Sar TaxID=2698737 ... [more]
A0A8J5XNK9_DIALT6.840e-4346.77Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A0G4FN06_9ALVE7.010e-4046.67Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S1TZN6_9STRA4.500e-3651.16Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
L1IG04_GUITC2.200e-3544.00Light-harvesting Chl a protein 2 n=2 Tax=Guillardi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 54..196
e-value: 4.4E-36
score: 124.8
NoneNo IPR availableGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 43..216
e-value: 7.4E-41
score: 142.2
NoneNo IPR availablePANTHERPTHR21649:SF125CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 27..205
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 38..206
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 27..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig67contigP-littoralis_Contig67:249507..253375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig67.38.1mRNA_P-littoralis_Contig67.38.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig67 249500..254794 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig67.38.1 ID=prot_P-littoralis_Contig67.38.1|Name=mRNA_P-littoralis_Contig67.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp
MKSAIAALALGAAGANAFVTPNAVVGRVATRSARQVSMAADPDASIALPF
TQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVI
WQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEE
QGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVP
DKSPLELTYEWSNQFH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022796Chloroa_b-bind
IPR001344Chloro_AB-bd_pln