mRNA_P-littoralis_Contig67.38.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig67.38.1
Unique NamemRNA_P-littoralis_Contig67.38.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: D8LKC5_ECTSI (Light harvesting complex protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKC5_ECTSI)

HSP 1 Score: 397 bits (1019), Expect = 5.640e-132
Identity = 195/216 (90.28%), Postives = 206/216 (95.37%), Query Frame = 2 
Query:    8 MKSAIAALALGAAGANAFVTPNAVVGRVATRSARQVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSNQFH 655
            MKSAIAALALGA G+NAFVTPNAVVGRVA+RSARQVSMAADPDASIALPFT RP NLNGELVGDVGFDPL FSEEGDL K+RRAELKHGRVAMLGVVG IWQEFSVLPGLGY PTKNLFQA++DAPWLA+LQ+ VFVGIFD++STKYD EQGRVPGDIGFDPLKLSKDGINEKWAL+ELKHGRLAMWAMAAIL+QQLLVPDKSPLELTYEWS QFH
Sbjct:    1 MKSAIAALALGAVGSNAFVTPNAVVGRVASRSARQVSMAADPDASIALPFTPRPENLNGELVGDVGFDPLNFSEEGDLAKYRRAELKHGRVAMLGVVGAIWQEFSVLPGLGYTPTKNLFQAVADAPWLAVLQVVVFVGIFDLQSTKYDIEQGRVPGDIGFDPLKLSKDGINEKWALAELKHGRLAMWAMAAILIQQLLVPDKSPLELTYEWSTQFH 216
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A835YVN7_9STRA (Light harvesting complex protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVN7_9STRA)

HSP 1 Score: 244 bits (622), Expect = 9.100e-73
Identity = 133/220 (60.45%), Postives = 165/220 (75.00%), Query Frame = 2 
Query:    8 MKSAIAALALGAAGANAFV--TPNAVVGR---VATRSARQVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSNQF 652
            MK+  A LAL AA A AFV   P+A+       A ++  +VS + D + S++LPF  +P NLNGELVGDVGFDPL FS++GDL KFRRAELKHGRVAMLGV+G I QE   + G  ++ TKNLF A++DA  LA+LQ+F FVG +DV +TK++E  GRVPGDIGFDPL+LSKDGINE WALSELKHGRLAM AM A L+Q L+ P+KS LE T++W+  F
Sbjct:    1 MKAVAALLAL-AAPAAAFVPVAPSALPATQLAAAKQTMSEVS-SGDDERSVSLPFAAKPANLNGELVGDVGFDPLRFSDKGDLAKFRRAELKHGRVAMLGVLGSILQESYSVQGPDFKTTKNLFAAVTDAGPLALLQVFAFVGAYDVATTKWEEANGRVPGDIGFDPLRLSKDGINETWALSELKHGRLAMIAMFAFLIQTLVEPNKSILEQTFDWARSF 218
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A7S1U1W6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1W6_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.060e-51
Identity = 102/206 (49.51%), Postives = 132/206 (64.08%), Query Frame = 2 
Query:   29 LALGAAGANAFVTPNAVVGRVATRSARQVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSN 646
            +AL A  + A   P  V GR       Q++MAAD  A  A+PF  +P NLNGEL GD+GFDP  FS+  DL   R AELKHGRV ML   G++ QE + L      P+ N  +A+  AP L I+QI + +G  + +++ Y    GRVPGD GFDPLKLS++GINEKWAL ELKHGRLAMWA A +LVQ L+ PD   ++ T++W+ 
Sbjct:    6 VALAALASAAAFAPARVGGR------GQMAMAADKSA--AIPFADKPENLNGELAGDIGFDPFRFSDSRDLAYLREAELKHGRVCMLAATGILTQEVTRLSDA--FPSTNCLEALKTAPTLGIIQIILVIGALEAQNSNY---VGRVPGDRGFDPLKLSENGINEKWALMELKHGRLAMWATAGMLVQTLVNPDVPIIQQTFDWAR 198
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: K8YRV9_NANGC (Light-harvesting protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YRV9_NANGC)

HSP 1 Score: 175 bits (443), Expect = 3.780e-47
Identity = 100/207 (48.31%), Postives = 129/207 (62.32%), Query Frame = 2 
Query:   50 ANAFVTPNAVVGRVATRSARQVSMAADPDA-SIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYE-----PTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSNQF 652
            A+AF+ P  +  R   R         D +  SIALPF  +P NLNGEL GDVGFDP  FS++GD+ KFR AELKH        VGV+ QE        Y+     P+KN  +A+  AP L +LQ+FVF+G +DV ++K++   GRVPGDIGFDPL+LS DG+ E W ++ELKHGRLAM A  A +VQ   + DK  LE T+EW+  F
Sbjct:   13 ASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKH--------VGVLVQEL-------YQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFE---GRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQAS-ISDKPILEQTFEWAKSF 200
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: W7TNE9_9STRA (DNA-directed RNA polymerase subunit n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNE9_9STRA)

HSP 1 Score: 186 bits (472), Expect = 5.240e-47
Identity = 104/202 (51.49%), Postives = 133/202 (65.84%), Query Frame = 2 
Query:   50 ANAFVTPNAVVGRVATRSARQVSMAADPDA-SIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYE-----PTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYE 637
            A+AF+ P  +  R   R         D +  SIALPF  +P NLNGEL GDVGFDP  FS++GD+ KFR AELKHGRVAML VVGV+ QE        Y+     P+KN  +A+  AP L +LQ+FVF+G +DV ++K++   GRVPGDIGFDPL+LS DG+ E W ++ELKHGRLAM A  A +VQ   + DK  LE T++
Sbjct:   13 ASAFLAPVPMHTRTQGRMYMADQAPVDEEVRSIALPFAAKPQNLNGELAGDVGFDPFKFSDKGDVAKFRVAELKHGRVAMLAVVGVLVQEL-------YQWNENFPSKNFLEALKTAPALGLLQLFVFLGAYDVTTSKFE---GRVPGDIGFDPLRLSADGLRENWQVAELKHGRLAMIAFLAFVVQAS-ISDKPILEQTFD 203
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A0G4GWW0_VITBC (Uncharacterized protein n=3 Tax=Sar TaxID=2698737 RepID=A0A0G4GWW0_VITBC)

HSP 1 Score: 168 bits (426), Expect = 2.350e-44
Identity = 87/179 (48.60%), Postives = 116/179 (64.80%), Query Frame = 2 
Query:  110 QVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSN 646
            Q+SM  D + S+ALPF ++P NLNGELVGDVGFDP GF+   DL + R  ELKHGRV ML  +GV+ Q  S        P+KN  +A   AP L ++Q+ + +   +  +  +    GR+PGD GFDPL+LS++GI E W L ELKHGRLAM     ++VQQLL PD+S +E+T  W+ 
Sbjct:   41 QISM-QDIEKSVALPFARKPDNLNGELVGDVGFDPFGFTNNQDLARMREVELKHGRVCMLATLGVLVQ--STYRWNEAFPSKNFLEAPLTAPTLGMIQLLLVISAIEYYNGNF---VGRIPGDRGFDPLRLSREGIRENWQLMELKHGRLAMIGFLGMVVQQLLRPDESIVEMTINWAK 213
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A8J5XNK9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XNK9_DIALT)

HSP 1 Score: 152 bits (383), Expect = 1.050e-38
Identity = 94/201 (46.77%), Postives = 117/201 (58.21%), Query Frame = 2 
Query:   47 GANAFVTPNAVVGRVATRSAR-QVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGD---LKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYE 637
            GA AF  P      +A RS R  V M  + D S A+PF  +P NLNGEL+ D+GFDP GF+ +     + KFR AELKHGRV ML V+G + QE             N   AI+  P L ILQI V  GI + ++  Y    GR+PGDIGFDPL LS  GI E WA++E+KHGRLAM A  A  VQ + V  +S L  T++
Sbjct:    8 GALAFQGP-----MLAGRSPRGAVRMVTEDDLSAAIPFVAKPKNLNGELLCDIGFDPAGFTNKASPEKIAKFREAELKHGRVCMLAVLGFVAQELIAPYQAAPFNEVNPINAIAAVPALGILQIIVLCGIIENRTQGY---AGRIPGDIGFDPLGLSAGGIKEDWAIAEIKHGRLAMIAFLAFQVQ-IKVSGESVLSTTFD 199
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A0G4FN06_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FN06_9ALVE)

HSP 1 Score: 146 bits (369), Expect = 5.240e-36
Identity = 81/181 (44.75%), Postives = 111/181 (61.33%), Query Frame = 2 
Query:  164 RPLN-----LNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSNQFH*FDLKLSPTALT 691
            RPL+       G+L GD+G+DPL  +E GD+ + R AEL+HGR+AML  +GV+ Q         + P+KN   A+  AP L I QIF  +G ++ K+  Y+   GR+PGD GFDPL LSK+GI  +W  SEL+HGRLAM+    +LVQQLL P +S +E T  W+       L + P A+T
Sbjct:   83 RPLDAPYQLFGGDLAGDLGWDPLNLAEGGDIVQLREAELRHGRLAMLATLGVLVQSTYRWDSENF-PSKNFLDALFTAPPLGIFQIFAAIGWWEFKNKDYE---GRIPGDRGFDPLGLSKNGIRPQWEKSELEHGRLAMFMFLGMLVQQLLSPKESIVEQTISWTKS-----LGVLPYAIT 254
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BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: A0A7S1TZN6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZN6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.530e-32
Identity = 66/130 (50.77%), Postives = 88/130 (67.69%), Query Frame = 2 
Query:  257 AELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEEQGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVPDKSPLELTYEWSN 646
            AELK GRV ML   G++ QE + L      P+ N  +A+  AP L I+QI + +G  + +++ Y    GRVPGD GFDPLKLS++GINEKWAL ELKHGRLAMWA A +LVQ L+ PD   ++ T++W+ 
Sbjct:    9 AELKQGRVCMLAATGILTQEVTRLSDA--FPSTNCLEALKTAPTLGIIQIILVIGALEAQNSNY---VGRVPGDRGFDPLKLSENGINEKWALMELKHGRLAMWATAGMLVQTLVNPDVPIIQQTFDWAR 133
[Close]
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Match: L1IG04_GUITC (Light-harvesting Chl a protein 2 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IG04_GUITC)

HSP 1 Score: 133 bits (335), Expect = 5.930e-32
Identity = 88/200 (44.00%), Postives = 110/200 (55.00%), Query Frame = 2 
Query:   23 AALALGAAGANAFVTPNAVVGRVATRSARQVSMAADPDASIALPFTQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVIWQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEE------QGRVPGDIGFDPLKLSKD-GINEKWALSELKHGRLAMWAMAAILVQQLL 601
            A L L AA + +   P A+  R A  S + + M    D S A+PF  RP  L+G + GDVGFDPLGFS   DLK  R AELKHGRV MLG +G + QE   LP  G+   K   +A    P   + QIF  +G  ++ S             GR PGD+GFDPL LS D     ++ L+ELKHGRLAM  +  +L QQLL
Sbjct:    4 AILVLAAAASASAFAPAALPTRAARSSTQGLKM---QDRSYAVPFLSRPPALDGTMAGDVGFDPLGFSNYFDLKWLREAELKHGRVCMLGTLGFLVQEKFQLPLPGFGE-KLPIEAFFTVPTGGLWQIFFTLGAIEILSNNGRISPGDMFADGRAPGDLGFDPLNLSSDESALRRFELAELKHGRLAMIGLGGMLHQQLL 199
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKC5_ECTSI5.640e-13290.28Light harvesting complex protein n=2 Tax=Ectocarpu... [more]
A0A835YVN7_9STRA9.100e-7360.45Light harvesting complex protein n=1 Tax=Tribonema... [more]
A0A7S1U1W6_9STRA1.060e-5149.51Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
K8YRV9_NANGC3.780e-4748.31Light-harvesting protein n=2 Tax=Monodopsidaceae T... [more]
W7TNE9_9STRA5.240e-4751.49DNA-directed RNA polymerase subunit n=1 Tax=Nannoc... [more]
A0A0G4GWW0_VITBC2.350e-4448.60Uncharacterized protein n=3 Tax=Sar TaxID=2698737 ... [more]
A0A8J5XNK9_DIALT1.050e-3846.77Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A0G4FN06_9ALVE5.240e-3644.75Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S1TZN6_9STRA1.530e-3250.77Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
L1IG04_GUITC5.930e-3244.00Light-harvesting Chl a protein 2 n=2 Tax=Guillardi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig67contigP-littoralis_Contig67:249500..254794 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKC5
Preferred nameLHCA1
PFAMsChloroa_b-bind
Model size2077
Max annot lvl2759|Eukaryota
KEGG koko:K08907
KEGG Pathwayko00196,map00196
Hectar predicted targeting categorychloroplast
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006091,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009314,GO:0009409,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009534,GO:0009535,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009637,GO:0009639,GO:0009642,GO:0009644,GO:0009645,GO:0009765,GO:0009768,GO:0009941,GO:0009987,GO:0010114,GO:0010218,GO:0010287,GO:0015979,GO:0016020,GO:0016168,GO:0019684,GO:0019904,GO:0031409,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046906,GO:0048037,GO:0050896,GO:0055035,GO:0097159,GO:1901363
Exons3
Evalue2.89e-140
EggNOG OGs28MEX@1|root,2QTYF@2759|Eukaryota
Ec32 ortholog descriptionLight harvesting complex protein
Ec32 orthologEc-01_009740.1
Descriptionphotosynthesis, light harvesting
Cds size651
COG categoryU
BRITEko00000,ko00001,ko00194
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791394.185264-UTR-P-littoralis_Contig67:249499..2495061680791394.185264-UTR-P-littoralis_Contig67:249499..249506Pylaiella littoralis U1_48UTRP-littoralis_Contig67 249500..249506 +
1680791394.2442183-UTR-P-littoralis_Contig67:253375..2547941680791394.2442183-UTR-P-littoralis_Contig67:253375..254794Pylaiella littoralis U1_48UTRP-littoralis_Contig67 253376..254794 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791394.2055786-CDS-P-littoralis_Contig67:249506..2496111680791394.2055786-CDS-P-littoralis_Contig67:249506..249611Pylaiella littoralis U1_48CDSP-littoralis_Contig67 249507..249611 +
1680791394.2218072-CDS-P-littoralis_Contig67:250739..2508591680791394.2218072-CDS-P-littoralis_Contig67:250739..250859Pylaiella littoralis U1_48CDSP-littoralis_Contig67 250740..250859 +
1680791394.2338407-CDS-P-littoralis_Contig67:252949..2533751680791394.2338407-CDS-P-littoralis_Contig67:252949..253375Pylaiella littoralis U1_48CDSP-littoralis_Contig67 252950..253375 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig67.38.1prot_P-littoralis_Contig67.38.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig67 249507..253375 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig67.38.1

>prot_P-littoralis_Contig67.38.1 ID=prot_P-littoralis_Contig67.38.1|Name=mRNA_P-littoralis_Contig67.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp
MKSAIAALALGAAGANAFVTPNAVVGRVATRSARQVSMAADPDASIALPF
TQRPLNLNGELVGDVGFDPLGFSEEGDLKKFRRAELKHGRVAMLGVVGVI
WQEFSVLPGLGYEPTKNLFQAISDAPWLAILQIFVFVGIFDVKSTKYDEE
QGRVPGDIGFDPLKLSKDGINEKWALSELKHGRLAMWAMAAILVQQLLVP
DKSPLELTYEWSNQFH*
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mRNA from alignment at P-littoralis_Contig67:249500..254794+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig67.38.1 ID=mRNA_P-littoralis_Contig67.38.1|Name=mRNA_P-littoralis_Contig67.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5295bp|location=Sequence derived from alignment at P-littoralis_Contig67:249500..254794+ (Pylaiella littoralis U1_48)
CAACACCATGAAGTCCGCCATCGCTGCTCTCGCTCTTGGCGCCGCCGGTG
CCAATGCCTTCGTCACCCCTAACGCCGTCGTGGGTCGCGTCGCAACCAGA
TCCGCACGACAGGTAAGCATTGCATCCTTTTGTTTTGTGTGATCCCCTCT
CCTGTTTCAAGCCTTCGAATTGTCACAGCATAGGTGTACGTGCATGACTT
GGTAATGGTAACATACCATTCTCATCATGCGTATCGTGCACTCGACTAAC
GCTCAAGGTTGGTATGGACGACAACCGTGGTTTAGGTTGATGAAGTTTTT
GAAGCTGGGAAAGTCAGAGGACGTGCACTGTTGAGATGGTTTTCGACCTA
ATATGTACAGCAATGTGAACACCCGGCCAGAGGTCCAGAGGAAACACAGG
AGGGCATCCGACCAGGCATTAGGGTGATGCTCAACTTCAGCCAAAGGGAA
ACCGGATGGAATGGCAGTAGGGATGGACGAGGCAGCTGGAGATTATGTCG
ATCACGGACGGAGGAGCTTGGCGATGCTCTGCCTCAGTTCGTCGGCCGAC
TGCATGCACAACAATCATGCTTGATGACAGAGGAGACCCTCGATTTGCAC
CGCTCTCGAACATGAAAAATCATAAAATCGTGTCAAATCATCTGACTTCG
TCCTCAGTATCAAAAAGCCATGACAAAAACGACGTGTCGCTCTTGACACA
AGCAGCATCAGTGCGTACGTTTGATGACATTTTTTGTTCGTGTGTAATTT
TACGCGTGTGCGACAGAATATGCTGGATGTTTAGGATGAGAACCAAAGAT
CGACCCCATAGTTTGCGTCAACCAGTAACCTGTTCCTTCTCCCAACCGCA
CGGGGCACCGTCCTCACCATTCGTAAAGGACGAGCCTGGCCTGCTACCAT
TCGATCGTCAACATTCCATTTGACCCGATACATCATATTCTGCTCGGTAG
TGCTGCTGCTCTGTTCGCGCTCGAAAGACGACTACGAGCATATGATATGC
TCCGGAGTATATAGCAGCCTGCACTTCGTCCTGTTGAACATGTAGGGGTG
TCCTGGCTCTGGTCCCCCATTTGGTCATACCTTTCTCCTCGGTGACCCGG
GCTGACCGGCCAGGTTTAGATTGGTGTCCACAACAGATGGAATTCCAAGC
ACAAACTGTGGTAACAAATTCTATAATTCAAAGTATCAGATTGTGCCCAC
TGGTGTCAACCCACCATGTCAACCGATAATACTTTCCCAGGTGTCGATGG
CCGCGGACCCGGACGCATCGATCGCGCTGCCTTTCACGCAGCGGCCGTTG
AACCTCAACGGCGAGCTCGTGGGCGACGTGGGATTTGACCCCTTGGGCTT
CTCAGAGGAGGTGAGCTATAGGAGAGGCACTGGGGGGTATAGGTATTTAG
GGACAGCGATGATGTGATCGTGGTACAGCAGCATACTATGACATCATGTT
ATTAAAACGTTCATGTGCAAGGGTCGGCCCCACCGCGTCATGTTGCGGAC
ATGGCCCTGTACCCTGCATGCATACTTTCGGCAGGAGTTGCCGACGGACC
CTTCCATATTATATTGAGGTTGGAGGTTGTGTACTCGCCATGGCCTGTGC
ATAAGGCTGCTTGTAACGAAAGGGTCATGGCCTGATATACTTGCGAAGCT
AAAGCGTTTGTGGAATCGTGATACGTACTGCCGAGCCAAATCCCTGTCTT
CCTGACCACCAGGCCCAAATCGAACACCGTCGATACATGTCTTTCACGTC
GACACGCCAAGATACTCAATGTGCGGGGCAATCCTTCACAAGGTGGTGTA
AAATGTCGGTGTTATTCAGGGCACCTAATTGAAATCAATACATCATTATT
ACCTTGCAAATCCCTTCAAGTACTGCTGCATCCCGATGGCCAATTCTCTT
ACGACGGGAATTCAAACTACGAGGGAAGGGTATGTACGCCGTATCACATC
ATATGCACAGCCTTTTCTCCCCAACTTCGCTTCAAAAGCAGTATCATCTG
TGCAGCAAAACGAGTGCTTTAGCCACTAGGTGCCTTTCGTGCATCCTTCA
CCTTTCGCTCTTTGGCGCTCGTAGATACTTTCGACCAAGCTCGCAAAAAC
ACTTCAGCTGCTTGAAATCAAATACGAAAAAAAATTCAAGTCGCTCGTCA
GACTTCGACTTTGCACATCAAAAATGTGTGTTCTCCGAGGGGACGTAACA
GTTCATGAGATGCGTTCAAGATTTCCGGGTTTTCCCGTTTTATCGAACCG
GTCGCCCCGGTGGTCTAGTGGTTCCCCGTTAACCTATTACTCGAAGTACT
AGTTGTAAGGTCGTGGGTCCGACTCTCTCTGAGAGCGTGTCTTGCGACTT
AACAGTGTAAAGCGATGAGTAAACAGAGGGAAGGAACTGCTGTACCCCAC
TCGCATCAATATTAGAGGTACGTACCGCAGGAGGAAGGTTTGGGCAATAA
AACAAAATACGAAGTAAAAAACAAAAAAAAACTGTTGTGTGACCTTCCCT
CACACACACGCACACATACGCACACAAATCTATCGTAGTCGCAGAAAAAA
CCATACCTGTGTCTCAATACGCTGTGTCTCCAAAAGGCACGAGGATAAAT
TATTGTTGTAAACGTAAACGATTCCTGACGCAACGCAGTCACCGCACACA
GACATGCGAAATTATGCACGTTTTTCACCACTTTTTTCGGTTCGCAAAAC
CCAAACTTGACTAACTTCATGCACATGCGTGCGTGCAACGGCGGTCTTTT
TTTCTTAACCGACGGTTCGGTTGAAATTTTCCCGCGCTAACGTATTTTGT
GAGAGTGCCGACCTCATTCGCCATTCAGATCTCTGGTACAGTATACTTTG
GTCTTTGGCTATCAAAAGATACTTGGACCAATCGGCCGCGTGTGGGCAAA
GTGGTAGATAATCCGCAGTCAAAATTTACAACGCCGCGTGAGTTTTTACG
AGTAGGCGTGTCTGCATGGGGGTGAGAACGCCGTCGTCAAACAGCAAGCA
TAGCAAGGTTTTTGCCCCGTATTTGTTTTGGCGTAAATTAATTTCAGTCG
GTCCCCGTGAAATACAGATGTCGAACAAGGTTTCGCTCAACATTACTTAC
GTATCCTTGGTCGGAACATTTTAAAAGTTGGGAGGCCATGTTGTACCGGC
GGTGCTGGCGTTTATGGACGCCTACTGTACGATACTTCCATGTGTTTTTT
TTCATCGCACGCGGGTAGACACCCATCTTTTGACGGCGGACTTCGCGAAA
TGTCTTTTATCCCTTCTTGAACGTTCAAAACGACAGCTATACAAACAGGT
ATGCACGGTTGGCGTGAATCATGCGTGCGAGGTGGAAGTGTGCTCTTTCG
TGCCCCCTCTCCCGCGTCGTACAAATACCATTATTTTCACTTTACGTCAC
TTTTTTTGTCGCCCCGCTCCCCCACCCTGATGCCTTCCATCCAATCGTAG
GGCGACCTCAAGAAGTTCCGCAGGGCGGAACTCAAGCACGGCCGCGTTGC
CATGCTCGGCGTCGTCGGTGTCATCTGGCAAGAGTTCAGCGTGCTCCCGG
GACTCGGCTACGAGCCTACGAAGAACTTGTTCCAGGCCATTTCTGACGCG
CCGTGGCTCGCGATCCTCCAGATCTTTGTCTTCGTGGGAATCTTCGACGT
GAAGAGCACCAAGTACGATGAGGAGCAGGGACGCGTGCCCGGAGACATCG
GCTTCGACCCCCTCAAGCTGTCGAAGGACGGGATCAACGAGAAGTGGGCG
CTTTCCGAGCTCAAGCACGGCCGCCTGGCCATGTGGGCCATGGCAGCAAT
CCTCGTGCAGCAGCTTCTTGTGCCCGACAAGTCTCCCCTCGAGCTCACCT
ACGAGTGGTCGAACCAGTTCCACTGATTTGACTTAAAATTAAGCCCGACC
GCCCTAACACCCGTGTGCCGATGTTTTGTGTGTTTTTTTTTGTGGAGGGG
AGAGGTGGGGGGTCGTAGCCGTCCCGCCGGTCAGGTTCTGTTTTGCACTT
TATTTTGCCGAGCTAGTGTCTGGTGTCTCTTTGTTTTTTTAGCGCGTGTG
TGGGTTCAGTGGGCTCTGCAGTCGGCTTGGAACGAGTCAAGTATCCGGAG
TTGTGCCCTCGCGGCGTTTGGTTTCGTAGAACGTTGTTGCCCAGCAGTGT
TTGCATGCACGAGGCTGCATTTAGCGTCTTGACATCACTTGGGTTACCCC
TTCCTTCGCGCCCGTAATCCTGCGCTCGCCGTCATTAGAGCTTCATCAGG
GGCAGGGTTGTGGCGCAAGCGTGCATCTCGTTGCCCTTTCGAAAGTCAAG
ATACGACCCGAGACATCAGGTTCACCGGGCAGATGTTTCGTCTTTTCGAG
GGATAGTTTTCGCAAGGACTCGGGTTTGCGGGGTAACGGTTTTGATTCGC
CCCCCCTTTCTTTCCCTTTAAGCAGGCATTCTGGTGGTTTAAACGCGAAT
GCATCCAGCCGTGGTGCGTTATTGTTCGCGTGTCCCATCCATCCCGTGTT
CACGCACCAAAGAACCGTGAAAAAAAGTTGCACAAACACGGTTTGTTCTT
GATGATTCCTCAAAGTTTTCGTTCCGCTCTGGCAACGTAACGCCATCACC
GAGGTAATCGAAGACCTTATCATTCGAAATTTCTTTGACCTGGTTTCTCC
CTGCCACAAAACTTTCACCCATGTTTGTTTCGCCCCTCAGTGGCTCCAAC
TTTATACCGAAAGGTGGTGCCCAAAATGAATTGGACGAAGACACACCTGA
TCCTGGTCTCGTGCATAATTATTGTATTTGTATCATACGCCTTCAAAGAC
ATTATCCCAGACCGGCGTATTGAAAATGAGACGGGTTGCTGAGAAATGAT
AGCAAGTCTACTTGCTGTTCAGGACAGGACGTTGGCTACAAATAGCGTAT
ATATGTAGCGCGGAAGTTCTTGTCTGATGCATTGCGCATTCAACGCCCGA
CGAAAGCCAATGGAAGTTTCATGTCATTTATCACTCATTTCAATCGGATG
CTGAGTGTGGGGCCGCACAAGTTGAACCGGGGTGCACTCGAAGTGAGAAT
TTAGACGACGGATGAGGGTGGTTCCTGTCCCCGCGGCATGCCCAAATCTA
AAATCTAAAATCAAAATTAAAAGGGGTTGGGTCCACCCAGCAGCACCTGC
GTTCATCTAAAATCTAAAAAGCGGAGGTACAACAAAAAATGAAAGGAAGA
GGCACGACCAGCAAGTCGGAGATAGATGGTCGTGGAATGCAAGCAGTGAA
CTTTGTTAAGCTAGTGCGGGAGCTACCATACGTCTAACGCAGTGC
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Coding sequence (CDS) from alignment at P-littoralis_Contig67:249500..254794+

>mRNA_P-littoralis_Contig67.38.1 ID=mRNA_P-littoralis_Contig67.38.1|Name=mRNA_P-littoralis_Contig67.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=651bp|location=Sequence derived from alignment at P-littoralis_Contig67:249500..254794+ (Pylaiella littoralis U1_48)
ATGAAGTCCGCCATCGCTGCTCTCGCTCTTGGCGCCGCCGGTGCCAATGC
CTTCGTCACCCCTAACGCCGTCGTGGGTCGCGTCGCAACCAGATCCGCAC
GACAGGTGTCGATGGCCGCGGACCCGGACGCATCGATCGCGCTGCCTTTC
ACGCAGCGGCCGTTGAACCTCAACGGCGAGCTCGTGGGCGACGTGGGATT
TGACCCCTTGGGCTTCTCAGAGGAGGGCGACCTCAAGAAGTTCCGCAGGG
CGGAACTCAAGCACGGCCGCGTTGCCATGCTCGGCGTCGTCGGTGTCATC
TGGCAAGAGTTCAGCGTGCTCCCGGGACTCGGCTACGAGCCTACGAAGAA
CTTGTTCCAGGCCATTTCTGACGCGCCGTGGCTCGCGATCCTCCAGATCT
TTGTCTTCGTGGGAATCTTCGACGTGAAGAGCACCAAGTACGATGAGGAG
CAGGGACGCGTGCCCGGAGACATCGGCTTCGACCCCCTCAAGCTGTCGAA
GGACGGGATCAACGAGAAGTGGGCGCTTTCCGAGCTCAAGCACGGCCGCC
TGGCCATGTGGGCCATGGCAGCAATCCTCGTGCAGCAGCTTCTTGTGCCC
GACAAGTCTCCCCTCGAGCTCACCTACGAGTGGTCGAACCAGTTCCACTG
A
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