mRNA_P-littoralis_Contig67.5.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: A0A6H5JUF1_9PHAE (Thioesterase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUF1_9PHAE) HSP 1 Score: 379 bits (972), Expect = 4.950e-126 Identity = 180/236 (76.27%), Postives = 202/236 (85.59%), Query Frame = 2
Query: 479 AWAGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFLQGNGEPAVLGFLSNVMAPLL 1186
AWAGGSASSFNKW S +PEAVELHAL+ PGRM RSKED LTSV AIVEGV++ALV GLLDKPFALFGHSFGSLVMFELARKL D G+ PV L+VSGC PPDMC+GGGRSP +SQLPRDALVDHLI LGGMP ELR++TELVDYFLPPIRADY A+E YRY+PRPG+D PITC ++CLGG++D GAPR+DLE W+S TAGEFR++ F GGHFFLQG GE AVL FL NV+ L
Sbjct: 27 AWAGGSASSFNKWTSKMPEAVELHALEFPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLDKPFALFGHSFGSLVMFELARKLKEDAGKIPVYLVVSGCCPPDMCVGGGRSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYEPRPGDDSRPITCPIICLGGEEDGGAPRSDLELWSSLTAGEFRLQMFGGGHFFLQGEGEQAVLTFLGNVLTEKL 262
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: A0A0N1GBM7_9ACTN (Oleoyl-(Acyl-carrier-protein) hydrolase n=1 Tax=Actinobacteria bacterium OK074 TaxID=1592327 RepID=A0A0N1GBM7_9ACTN) HSP 1 Score: 161 bits (407), Expect = 3.330e-42 Identity = 100/232 (43.10%), Postives = 129/232 (55.60%), Query Frame = 2
Query: 482 WAGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLD-KPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFLQGNGEPAVLGFLSNVM 1174
+AGG A+ F W + L V++ A QLPGR +R E +TS + + +++AL T LLD P+ALFGHS G+L F LAR L A G P LIVSGCR P +S+L ALVD L GG P E+ + EL+D LP +RAD + + Y P P DCP L LGG DD+ P L+ W T GEFR+R F+GGHFFL E +VL L ++
Sbjct: 30 YAGGHANLFAPWHTALRPTVDVRAFQLPGRHARRDEPPITSFGPLADRLTDAL--TPLLDGSPYALFGHSMGALAAFALARTLTAH-GTPPAQLIVSGCRAPS----DPPEEPLSRLADAALVDRLRTWGGTPQEVLDNPELLDVVLPVLRADLSVVDSHTYCPAPPLDCP-----LTVLGGTDDAVVPPAGLDAWRRETNGEFRLRLFDGGHFFLH-TAEESVLAELGRIL 248
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: A0A7W1YQQ1_9CHLR (Thioesterase n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1YQQ1_9CHLR) HSP 1 Score: 160 bits (405), Expect = 6.820e-42 Identity = 91/231 (39.39%), Postives = 121/231 (52.38%), Query Frame = 2
Query: 482 WAGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFLQGNGEPAVLGFLSNVM 1174
+AGG A +F W LLP VEL + LPGR R E L S+PA+VE ++ L+ LD+PFALFGHS G L+ FE+ R+L P CL +S R P + R V QLP A ++ L L G P E+ + ELV+ LP +RAD+ FE Y+Y P +TC L GG D R DL W T+ F +R G HFF+ + P +L L+ +
Sbjct: 27 YAGGGALTFRPWQQLLPREVELCLIHLPGREQRLAEPALPSLPALVEALTPKLLPW--LDRPFALFGHSMGGLISFEVVRELRRQQQTEPSCLFLSAIRAPQL---RPREAPVHQLPTAAFLERLRQLNGTPEEVLSNPELVEVMLPALRADFELFERYQYLPAES-----LTCPLTVFGGLQDRDVTREDLMAWREQTSDRFELRMLPGDHFFINTH-RPLLLQLLATAL 246
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: A0A326U590_9CHLR (Surfactin synthase thioesterase subunit n=2 Tax=Thermosporothrix TaxID=768650 RepID=A0A326U590_9CHLR) HSP 1 Score: 159 bits (403), Expect = 1.360e-41 Identity = 83/216 (38.43%), Postives = 118/216 (54.63%), Query Frame = 2
Query: 482 WAGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFLQ 1129
+AGG AS++ W LP+ +EL A+QLPG +R KE T +P++VE ++EAL+ +LD+PFA+FGHS G+L+ FEL R L R+P L +SGCR + P V L + L+D+L G P E+ E++ LP RAD+ +E Y+Y+ P++C + GG DS L+ W T G F G HFFLQ
Sbjct: 29 YAGGGASAYRSWQQQLPDTIELCAVQLPGHETRLKEQAYTHLPSLVEAMAEALLP--VLDRPFAIFGHSMGALLSFELTRYLRKHAQRSPEHLFLSGCRAAHL---PRTEPDVHTLSDEGLIDYLRRFNGTPEEILQNEEMMQLLLPIFRADFTLYETYQYQHEE-----PLSCPITVFGGHQDSSVSYQQLQAWRDHTRGAFAAHMLPGNHFFLQ 234
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: UPI001F5D8756 (alpha/beta fold hydrolase n=1 Tax=Streptomyces sp. MST-110588 TaxID=2833628 RepID=UPI001F5D8756) HSP 1 Score: 158 bits (400), Expect = 5.520e-41 Identity = 91/218 (41.74%), Postives = 120/218 (55.05%), Query Frame = 2
Query: 479 AWAGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVAT-GLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFLQ 1129
A AG S F W +LP EL +QLPGR R +E+ T +PA++ G+S AL AT G P LFGHSFG+LVM++LAR+++A L+VSG P R+ ++S+L L+D L LGG P EL +ET + L +RA Y E Y P P P+TC ++ GG +D A DL+ WA T G FR T GGHFFL+
Sbjct: 34 AGAGSGPSEFVTWHEVLPPDTELWPIQLPGREKRLREEPYTDLPALMAGLSAALEATEGATPLPLVLFGHSFGALVMYDLARRISARQPHRVQGLLVSGLAAPGRPT---RNQEISRLGDADLLDWLRHLGGTPTELLDETWFATWLLRDVRASYRIREAYAAAPAP-----PLTCPVIAFGGQEDFEADAADLDAWARLTTGRFRSHTLPGGHFFLR 243
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: A0A1Q7ZXI5_9BACT (Thioesterase domain-containing protein n=6 Tax=Bacteria TaxID=2 RepID=A0A1Q7ZXI5_9BACT) HSP 1 Score: 157 bits (398), Expect = 8.560e-41 Identity = 88/218 (40.37%), Postives = 119/218 (54.59%), Query Frame = 2
Query: 482 WAGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGC---RPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFL 1126
+AGG A +F +WP +LP + ++ A LPGR R E + ++ ++EAL+ LLDKPFA+FGHS G+L+ +E R L G PV L+VSGC + PD C + LP++ V L L GMP E+ EL++ LP +RAD+ A E Y Y D PP++CS+ LGG D R LE W T G F MR G HFF+
Sbjct: 21 YAGGGAQAFQQWPDILPPSFDVWAANLPGRGKRLMESAFFQLSGLIAALTEALMP--LLDKPFAIFGHSMGALIAYETVRTLKKLHGPMPVHLLVSGCFAPQLPDPC-------HIHHLPQEEFVRELRRLNGMPKEILENQELMELVLPSLRADFTATETYVYN-----DEPPLSCSISVLGGWRDPLTTRESLEAWRIHTTGYFSMRMLPGDHFFI 224
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: UPI001574BDD2 (alpha/beta fold hydrolase n=1 Tax=Rhizobium skierniewicense TaxID=984260 RepID=UPI001574BDD2) HSP 1 Score: 157 bits (398), Expect = 8.800e-41 Identity = 86/220 (39.09%), Postives = 119/220 (54.09%), Query Frame = 2
Query: 482 WAGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFLQGNGE 1141
+AGG+A+ + WP L V++ L LPGR R +E L V I + +EAL+ LD+P+ALFGHS G+ V FE+AR+L P CL VSG P + G + LP DA +D ++ L G P E+ +L+D LP +RAD+ A E Y P P P+TC +V LGG +D P +E W + G FR +F G HFF++ E
Sbjct: 33 YAGGNAALYRDWPKWLGPKVDVCPLHLPGRGRRFREKPLYRVSDIADQAAEALLQH--LDRPYALFGHSMGASVAFEIARRLRRHGAPEPGCLFVSGRSAPHLPKEGDN---IHALPDDAFIDAVMRLNGSPPEVLKHPDLIDLILPTLRADFEAVETYHLTPEP-----PLTCPIVALGGREDPDLPATSIEAWRVHSTGTFRHESFPGDHFFIRAQDE 242
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: A0A1C4W026_9ACTN (Medium-chain acyl-[acyl-carrier-protein] hydrolase n=2 Tax=Micromonospora TaxID=1873 RepID=A0A1C4W026_9ACTN) HSP 1 Score: 157 bits (396), Expect = 1.700e-40 Identity = 91/216 (42.13%), Postives = 120/216 (55.56%), Query Frame = 2
Query: 482 WAGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFLQ 1129
+AGG AS F WP+ +E+ A+QLPGR SR + V +V V L GLLD+PFALFGHS G+LV FE AR+LAA P L VS P + P+ LP D L+D + +GG PA++ + L+ LP +RAD+ + Y ++P P DCP + LGG DD AP LE WA T G FR+ F+GGHF+L+
Sbjct: 38 YAGGGASVFASWPAGTGPDIEVCAVQLPGRESRLGQRPFQDVRTLVSAVEAGL--GGLLDEPFALFGHSMGALVAFEFARRLAARGRPAPAHLFVSARPAPHLPRPW---PRAHLLPDDQLIDRIRQIGGTPAQVLADARLMRLVLPVLRADFAVNDGYVHRPGPLLDCP-----VTALGGRDDPEAPPRVLEAWARHTTGPFRLHRFDGGHFYLR 243
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: A0A7V4U0V4_9BACT (Thioesterase n=1 Tax=Caldithrix abyssi TaxID=187145 RepID=A0A7V4U0V4_9BACT) HSP 1 Score: 155 bits (393), Expect = 4.080e-40 Identity = 80/214 (37.38%), Postives = 117/214 (54.67%), Query Frame = 2
Query: 485 AGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFL 1126
AGG++++F WP LPE +E+ A+++PG SR ED + + +V+ ++E + LD+PFA FGHS GSL+ FELA L G PV L SG P + R + LP+ V H+ + G P E+ EL+D +P +RAD+ E Y+Y P+P P C + GG D ++DL+ W T+G F +R F G HF+L
Sbjct: 30 AGGNSTAFRNWPDYLPETMEVAAVEIPGHGSRLAEDTIRRLIPLVKAIAEGI--DPYLDRPFAFFGHSMGSLLSFELAHYLRLKKGVEPVHLFFSGRGAPHL---PAREEPIHGLPQAEFVQHIRNYNGTPKEVLEHQELMDILIPILRADFEVCETYQYFPKP-----PFNCPITAFGGLQDPSTTKDDLQGWKKHTSGAFNLRMFPGDHFYL 233
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Match: A0A410RS52_CORCK (Thioesterase domain-containing protein n=7 Tax=Myxococcaceae TaxID=31 RepID=A0A410RS52_CORCK) HSP 1 Score: 155 bits (391), Expect = 4.150e-40 Identity = 93/232 (40.09%), Postives = 122/232 (52.59%), Query Frame = 2
Query: 485 AGGSASSFNKWPSLLPEAVELHALQLPGRMSRSKEDCLTSVPAIVEGVSEALVATGLLDKPFALFGHSFGSLVMFELARKLAADTGRTPVCLIVSGCRPPDMCLGGGRSPQVSQLPRDALVDHLIDLGGMPAELRNETELVDYFLPPIRADYGAFECYRYKPRPGEDCPPITCSLVCLGGDDDSGAPRNDLEHWASFTAGEFRMRTFEGGHFFLQGNGEPAVLGFLSNVMAP 1180
AGG AS F W LPE VE AL+LPGR +R +E + +V+G+++ L LLD+PFALFGHS G L+ FEL R+L P L +S P SPQV + +A + L+ L G P E+ L+D +P IRAD+ E Y Y+ P P+ L LGG+DD R LE WA T F ++ F GGHFFL+ N EP +L V+ P
Sbjct: 9 AGGGASVFRTWHRDLPETVEGCALELPGRGARIRELPSLRLEPLVQGLADTLEP--LLDRPFALFGHSMGGLISFELVRELRRRHAPLPCHLFISAFAAPQHSRW---SPQVHLMSNEAFLQFLVRLEGTPPEVLASPGLMDMLMPIIRADWAVIESYTYRREP-----PLPVPLTVLGGEDDKAVARVALEEWAEQTRESFALKMFPGGHFFLRTNAEP-LLQLFRQVLQP 229 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig67.5.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig67.5.3 >prot_P-littoralis_Contig67.5.3 ID=prot_P-littoralis_Contig67.5.3|Name=mRNA_P-littoralis_Contig67.5.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=264bp MASPLSGTSTWSVRCRAQPLWGGPSDQAWAGGSASSFNKWPSLLPEAVELback to top mRNA from alignment at P-littoralis_Contig67:34445..38653- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig67.5.3 ID=mRNA_P-littoralis_Contig67.5.3|Name=mRNA_P-littoralis_Contig67.5.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4209bp|location=Sequence derived from alignment at P-littoralis_Contig67:34445..38653- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig67:34445..38653- >mRNA_P-littoralis_Contig67.5.3 ID=mRNA_P-littoralis_Contig67.5.3|Name=mRNA_P-littoralis_Contig67.5.3|organism=Pylaiella littoralis U1_48|type=CDS|length=792bp|location=Sequence derived from alignment at P-littoralis_Contig67:34445..38653- (Pylaiella littoralis U1_48)back to top |