mRNA_P-littoralis_Contig669.36.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig669.36.3
Unique NamemRNA_P-littoralis_Contig669.36.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: A0A8D1A7H5_PIG (40S ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=9823 RepID=A0A8D1A7H5_PIG)

HSP 1 Score: 361 bits (927), Expect = 5.020e-118
Identity = 186/191 (97.38%), Postives = 189/191 (98.95%), Query Frame = 2 
Query:  431 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPV 1003
            MFTGA KIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQG RPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCK+DGSK+LKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFP+
Sbjct:    1 MFTGAIKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGTRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKVDGSKILKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPL 191
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: D7G463_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G463_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 3.880e-114
Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 2 
Query:  428 TMFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQDP 1012
            TMFTGATKIVKPEGQEADEFEQ VAQELFNLEMSAADIK++IRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQG+RPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQ+P
Sbjct:  518 TMFTGATKIVKPEGQEADEFEQQVAQELFNLEMSAADIKADIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGIRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQEP 712
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: A0A836C8B1_9STRA (40S ribosomal protein S7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B1_9STRA)

HSP 1 Score: 307 bits (786), Expect = 5.400e-97
Identity = 152/186 (81.72%), Postives = 177/186 (95.16%), Query Frame = 2 
Query:  452 IVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQD 1009
            IVKPEGQ ADEFEQTVAQEL+NL+MSAA+IK++++DLYIT AKQV++ GGKKAII+FVPYRLLR++HKIQ RLV ELEKKFSGRHVVIIA RTILGK++AR++KT+G RPRSRTLTAVQDA+LEDLV+PTEIVGKRTRC++DG+KLLKV LDPKDQVNVETKLDTFS VYKK+TNK+VVFEFPVQ+
Sbjct:    6 IVKPEGQAADEFEQTVAQELYNLQMSAAEIKADLKDLYITSAKQVELAGGKKAIILFVPYRLLRAFHKIQARLVPELEKKFSGRHVVIIAQRTILGKNFARNSKTKGPRPRSRTLTAVQDAILEDLVYPTEIVGKRTRCRVDGTKLLKVHLDPKDQVNVETKLDTFSYVYKKLTNKEVVFEFPVQE 191
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: A0A7S2XZE0_9STRA (40S ribosomal protein S7 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE0_9STRA)

HSP 1 Score: 307 bits (787), Expect = 9.440e-97
Identity = 153/192 (79.69%), Postives = 177/192 (92.19%), Query Frame = 2 
Query:  434 FTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQD 1009
            FTGA KIVKP GQE D+FE++VAQEL+NLEMSAA++K+E+RDLYIT AK+V+VGGGKKAIII VPY  LR++HKIQ RLVRELEKKFSGRHVV+IA RTILGKSY RSTKT+G RPRSRTLT VQ+ +LEDLV+PTEIVGKRT+CK+DGSK+LKV LDPKDQVNVETKLDTFS VYKK+TNKDVVF+FP+Q+
Sbjct:   25 FTGAKKIVKPAGQEIDDFEKSVAQELYNLEMSAAELKAELRDLYITAAKEVEVGGGKKAIIIVVPYVKLRAFHKIQLRLVRELEKKFSGRHVVVIAQRTILGKSYTRSTKTKGPRPRSRTLTHVQEQILEDLVYPTEIVGKRTKCKLDGSKILKVLLDPKDQVNVETKLDTFSFVYKKLTNKDVVFQFPIQE 216
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: A0A6T5NXM7_HETAK (40S ribosomal protein S7 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5NXM7_HETAK)

HSP 1 Score: 301 bits (770), Expect = 3.370e-94
Identity = 152/193 (78.76%), Postives = 173/193 (89.64%), Query Frame = 2 
Query:  431 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQD 1009
            M  G+ KIVKP GQE DEFE  VAQELFNLEMSA +IK+++RDLYIT AK+VDVG GKKAII+ VPY+LLR +++IQ RLVRELEKKFSGRHVVIIA RTILGKSYARSTKT+G+RPRSRTLTAVQD++LEDLV+PTEIVGKRTRC + G KLLKV LDPKDQVNVETKLDTF+ VYKK+TNKDV F+FPVQ+
Sbjct:   26 MSLGSKKIVKPPGQEPDEFEAQVAQELFNLEMSAVEIKADLRDLYITAAKEVDVGPGKKAIIVVVPYKLLRKFNRIQIRLVRELEKKFSGRHVVIIAQRTILGKSYARSTKTKGLRPRSRTLTAVQDSILEDLVYPTEIVGKRTRCAVSGEKLLKVYLDPKDQVNVETKLDTFAYVYKKLTNKDVSFQFPVQE 218
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: A0A2D4C6D5_PYTIN (40S ribosomal protein S7 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6D5_PYTIN)

HSP 1 Score: 294 bits (753), Expect = 4.710e-92
Identity = 147/191 (76.96%), Postives = 170/191 (89.01%), Query Frame = 2 
Query:  431 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPV 1003
            MFTGA KI KPEGQ ADEFEQ VAQELFNLE SAA++K+E++DLYIT AKQVDV  G+KAI+IFVPYRL ++++KIQ RL RELEKKFSGRHVV I  RTILGK +AR+ K  G RPRSRTLTAVQ+A+L+D+V+PTEIVGKRTR ++DGSKLLKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPV
Sbjct:    1 MFTGAAKIKKPEGQTADEFEQQVAQELFNLEASAAELKNELKDLYITAAKQVDVASGRKAIVIFVPYRLHKAFNKIQARLTRELEKKFSGRHVVFITQRTILGKGFARANKATGPRPRSRTLTAVQEAILDDIVYPTEIVGKRTRVRLDGSKLLKVYLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPV 191
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: A0A662XBL9_9STRA (40S ribosomal protein S7 n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XBL9_9STRA)

HSP 1 Score: 294 bits (753), Expect = 4.710e-92
Identity = 147/191 (76.96%), Postives = 172/191 (90.05%), Query Frame = 2 
Query:  431 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPV 1003
            MFTG +KIVKPEGQ  DEFEQ VAQEL+NLE+SAA+IK++++DLYIT AKQVD+  G+KAI+IFVP+RL  S+ KIQ RLVRELEKKFSGRHV+IIA RTILGK +AR+ KT G RPRSRTLTAVQ+A+L+DLV+PTEIVGKRTR ++D SKLLKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPV
Sbjct:    1 MFTGRSKIVKPEGQTPDEFEQQVAQELYNLELSAAEIKNDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVIIIAQRTILGKGFARANKTSGPRPRSRTLTAVQEAILDDLVYPTEIVGKRTRVRLDSSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPV 191
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: H3G9W8_PHYRM (40S ribosomal protein S7 n=21 Tax=Peronosporaceae TaxID=4777 RepID=H3G9W8_PHYRM)

HSP 1 Score: 290 bits (741), Expect = 2.450e-90
Identity = 146/189 (77.25%), Postives = 168/189 (88.89%), Query Frame = 2 
Query:  443 ATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQD 1009
            A+KIVKPEGQ ADEFE  VAQELFNLE SAA+IK++++DLYIT AKQVD+  G+KAI+IFVP+RL  S+ KIQ RLVRELEKKFSGRHVVIIA RTILGK Y+R+    G RPRSRTLT VQ+ +L+DLVFPTEIVGKRTRC++DGSKLLKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPVQ+
Sbjct:    2 ASKIVKPEGQTADEFELQVAQELFNLEQSAAEIKTDLKDLYITAAKQVDISSGRKAIVIFVPFRLHASFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRANHGAGPRPRSRTLTHVQEQILDDLVFPTEIVGKRTRCRLDGSKLLKVHLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQE 190
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: A0A7S2C777_9STRA (40S ribosomal protein S7 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C777_9STRA)

HSP 1 Score: 290 bits (741), Expect = 3.230e-90
Identity = 149/195 (76.41%), Postives = 171/195 (87.69%), Query Frame = 2 
Query:  431 MFTGATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVG---GGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQ 1006
            MFTG  KIVKPEGQE+ EFE TVAQELFNLEMSAA+IKSE+RDLYIT AK+V+VG    GK+AIIIFVP++LL+ +HKIQ RLVRELEKKFSG+HV I+A RTILGKSY+RSTKT+G RPRSRTLTAVQDA+LEDLVFPTEIVGKRTRCK+DG+K L V LD KD VNVETKL+TF+ VYK +TNK+V F FP +
Sbjct:    1 MFTGFKKIVKPEGQESTEFENTVAQELFNLEMSAAEIKSELRDLYITAAKEVNVGPASAGKQAIIIFVPFKLLKQFHKIQARLVRELEKKFSGKHVTIVAQRTILGKSYSRSTKTKGPRPRSRTLTAVQDAILEDLVFPTEIVGKRTRCKLDGTKQLNVFLDAKDIVNVETKLETFADVYKHLTNKEVEFAFPTE 195
[Close]
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Match: K3XAM7_GLOUD (40S ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=4782 RepID=K3XAM7_GLOUD)

HSP 1 Score: 286 bits (733), Expect = 3.880e-89
Identity = 146/188 (77.66%), Postives = 167/188 (88.83%), Query Frame = 2 
Query:  443 ATKIVKPEGQEADEFEQTVAQELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHKIQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAVQDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSSVYKKITNKDVVFEFPVQ 1006
            + KIVKPEGQ ADEFE  VAQEL NL+ SAA+IK++++DLYIT AKQVDV  G+KAI+IFVPYRL  ++ KIQ RLVRELEKKFSGRHVVIIA RTILGK Y+RS KT G RPRSRTL AVQ+A+L+DLV+PTEIVGKRTR ++DGSKLLKV LDPKDQVNVETKLDTF++VYKK+TNKDVVFEFPVQ
Sbjct:    2 SAKIVKPEGQTADEFELQVAQELANLQQSAAEIKNDLKDLYITAAKQVDVASGRKAIVIFVPYRLHSAFKKIQARLVRELEKKFSGRHVVIIAQRTILGKGYSRSNKTNGPRPRSRTLVAVQEAILDDLVYPTEIVGKRTRVRLDGSKLLKVFLDPKDQVNVETKLDTFATVYKKLTNKDVVFEFPVQ 189
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig669.36.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8D1A7H5_PIG5.020e-11897.3840S ribosomal protein S7 n=1 Tax=Sus scrofa TaxID=... [more]
D7G463_ECTSI3.880e-11497.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8B1_9STRA5.400e-9781.7240S ribosomal protein S7 n=1 Tax=Tribonema minus T... [more]
A0A7S2XZE0_9STRA9.440e-9779.6940S ribosomal protein S7 n=1 Tax=Fibrocapsa japoni... [more]
A0A6T5NXM7_HETAK3.370e-9478.7640S ribosomal protein S7 n=1 Tax=Heterosigma akash... [more]
A0A2D4C6D5_PYTIN4.710e-9276.9640S ribosomal protein S7 n=1 Tax=Pythium insidiosu... [more]
A0A662XBL9_9STRA4.710e-9276.9640S ribosomal protein S7 n=2 Tax=Nothophytophthora... [more]
H3G9W8_PHYRM2.450e-9077.2540S ribosomal protein S7 n=21 Tax=Peronosporaceae ... [more]
A0A7S2C777_9STRA3.230e-9076.4140S ribosomal protein S7 n=1 Tax=Dictyocha speculu... [more]
K3XAM7_GLOUD3.880e-8977.6640S ribosomal protein S7 n=3 Tax=Pythiaceae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig669contigP-littoralis_Contig669:127419..133819 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G463
Preferred nameRPS7
PFAMsRibosomal_S7e
Model size2207
Max annot lvl2759|Eukaryota
KEGG koko:K02993,ko:K11592
KEGG Pathwayko03010,ko05206,map03010,map05206
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
GOsGO:0000184,GO:0000956,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0014020,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016071,GO:0016072,GO:0016331,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0021915,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030097,GO:0030154,GO:0030162,GO:0030234,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031647,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035148,GO:0035239,GO:0035295,GO:0042176,GO:0042177,GO:0042254,GO:0042274,GO:0042886,GO:0042981,GO:0043009,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045861,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051726,GO:0055105,GO:0055106,GO:0060255,GO:0060429,GO:0060562,GO:0060606,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072175,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1902253,GO:1902255,GO:1902531,GO:1902533,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2001233,GO:2001235,GO:2001242,GO:2001244
Exons6
Evalue1.92e-122
EggNOG OGsKOG3320@1|root,KOG3320@2759|Eukaryota
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-02_001435.1
Descriptionstructural constituent of ribosome
Cds size660
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig669.36.3prot_P-littoralis_Contig669.36.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig669 128611..133464 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791390.6998234-UTR-P-littoralis_Contig669:127418..1286101680791390.6998234-UTR-P-littoralis_Contig669:127418..128610Pylaiella littoralis U1_48UTRP-littoralis_Contig669 127419..128610 -
1680791390.7952816-UTR-P-littoralis_Contig669:133464..1338191680791390.7952816-UTR-P-littoralis_Contig669:133464..133819Pylaiella littoralis U1_48UTRP-littoralis_Contig669 133465..133819 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791390.720374-CDS-P-littoralis_Contig669:128610..1287061680791390.720374-CDS-P-littoralis_Contig669:128610..128706Pylaiella littoralis U1_48CDSP-littoralis_Contig669 128611..128706 -
1680791390.73179-CDS-P-littoralis_Contig669:129188..1292841680791390.73179-CDS-P-littoralis_Contig669:129188..129284Pylaiella littoralis U1_48CDSP-littoralis_Contig669 129189..129284 -
1680791390.744203-CDS-P-littoralis_Contig669:130072..1301991680791390.744203-CDS-P-littoralis_Contig669:130072..130199Pylaiella littoralis U1_48CDSP-littoralis_Contig669 130073..130199 -
1680791390.7537067-CDS-P-littoralis_Contig669:130539..1306521680791390.7537067-CDS-P-littoralis_Contig669:130539..130652Pylaiella littoralis U1_48CDSP-littoralis_Contig669 130540..130652 -
1680791390.7660534-CDS-P-littoralis_Contig669:130959..1310191680791390.7660534-CDS-P-littoralis_Contig669:130959..131019Pylaiella littoralis U1_48CDSP-littoralis_Contig669 130960..131019 -
1680791390.7821126-CDS-P-littoralis_Contig669:133296..1334641680791390.7821126-CDS-P-littoralis_Contig669:133296..133464Pylaiella littoralis U1_48CDSP-littoralis_Contig669 133297..133464 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig669.36.3

>prot_P-littoralis_Contig669.36.3 ID=prot_P-littoralis_Contig669.36.3|Name=mRNA_P-littoralis_Contig669.36.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=220bp
MWFQQATQYCTQVPSLLSVPAVSGTMFTGATKIVKPEGQEADEFEQTVAQ
ELFNLEMSAADIKSEIRDLYITGAKQVDVGGGKKAIIIFVPYRLLRSYHK
IQTRLVRELEKKFSGRHVVIIATRTILGKSYARSTKTQGVRPRSRTLTAV
QDAMLEDLVFPTEIVGKRTRCKIDGSKLLKVQLDPKDQVNVETKLDTFSS
VYKKITNKDVVFEFPVQDP*
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mRNA from alignment at P-littoralis_Contig669:127419..133819-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig669.36.3 ID=mRNA_P-littoralis_Contig669.36.3|Name=mRNA_P-littoralis_Contig669.36.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=6401bp|location=Sequence derived from alignment at P-littoralis_Contig669:127419..133819- (Pylaiella littoralis U1_48)
GGAAATGGCGAAGTCTATTGCACAGACGAAAATCCCGTCGAAGAGTCCAG
GGGTTGAGCTTGTATCTCAGGGGTTGATTTAATGTTCGTGTAACGTCGTG
TGTTGGTGCCAGCCATTCCTCCTAAGTGGCCAGCTCTAAGCGCTGTGCAC
CACTGCTGTGTAGCAGCACTCGTGCTACATCTTTTCGCCTTCGTACATAA
GCTCACGAACAACAAAAATAGGCTGGAGCGTCTTCTTCTGATGCACAGCT
GACTTTCGAATCCACCCCTCCCTGCATCCTCTCTTATTCGGTGTCGGACA
CTCTCATCTTCTCCGTCTCTCTCTCTCTCGCTCTGTATACCTATCGACCC
TGCCGATGTGGTTTCAACAAGCAACGCAGTACTGCACTCAGGTTCCCTCT
CTCCTGTCTGTCCCCGCTGTCTCAGGCACCATGTTCACGGGAGCGACGAA
GATCGTCAAGCCTGAGGGCCAGGAGGCCGATGAGTTTGAGCAGACGGTAG
CCCAGGAGCTTTTCAACCTCGAGGTGTGATGGTACACGAATTGGCTTCAT
TACTGCGGCTCAGGACACGTAACGCAAAGCTTATTTTCTGTTGTGGACTC
GGAAGGACTGTTTCGTCCCACTCAAACTCCGCCTACAGGATGGTTCAGAC
TCCACAGATACAGCAGCCCTGCGTATGCTGCTGGGACAGATACTTCAGAT
TATCACGTGATTTCAAATTATGTAATCTTGATGTCGTTGTGTGCAAAGTA
TCTCTCTCATGAAAGTAGTCATCCCGTACGTTTCAGCTGGTGGGAGAACA
AGTACAAGTATGTCCTTTGATGCCAAGGCATCAAGACATGGCACAAATTA
GTGTAGTTGGGAGGATCATCGCTCTGTAGTTCAGGTGTCGACAAACGCGT
TTGGTTATCTTGTCACGATGCTCAAAACCACTCACAAGCTCGGCGGGATA
CGATATACTCGGAGTATGATGTCGACAACGACGCGATTGGTACCTACTAC
GCATGAGGAGGACTGTTGTATTTGTCTTCGTGAAACCGCAGAGACCGCAT
TTACAGGACAGGCCGGTATACTAAAACAGAGAGTTCGACCATGATGTTAC
CTAGCAGCCATGAGGAGTTTGCCAAACAAAAACAGCCGATTTTCAATACC
GCAGTTAATACGAAGAATGTTCTCATGCAGGTTTGGATATACCTGTACCC
GTACAGCAGTCGAACTAGTGGGCATGAGATTTCTCAAAACTTTTCTCTGG
ATCATTTTTTGGGATTGCGTCTGGAAGTAGAACCTGCGTCTGCCGTACGA
TAGTATTGTAAAAAATATCGAGGAAAACCCGCAGGTGACGAGCCGTAAAG
CCCTGTATTAATATTAACACTGTTCAGGAAATCAAGATTAGAAAGAATCA
AAGTCAAAGTTGGTCTATGATTGGTCGACGCTCTCAAGACCTACCGACGA
CAATTTTGATTTCTTGGACGTCACCGGCAGACTAAAGTCCAAGAAGACTT
AATTGCCAGGAAATCGAAATAAAAATTGGGGGTCTTGACCCGATCGAAGG
CTTTCTGAACGATGTGGCTCGCGCACCGCACCGCAGACAAGCAGATAGAG
GCACAGGGCACGCCGACGCAACCCACGGAACACAGAGAGAGGTGTGCCGT
CGCACGAGGTATATCAAAGCCAGAACCACACCTAGAGTAGAACGAAGACA
AGACAGACTCGCATGATGAGGCACCAAACAACACCTAGAGCAGGACAACG
ACAACCAAAACAACAGCAGACAGACGCGTACAGCAGTCTCGAGTCCATGA
TGAGCCAACACACAAACAAACGCGGTGTCTCAGCGACGTAGCATCAGCGT
GTTGCATTGCAGTGCTGCTCTGGATACATGTATCTGTACTGCTGCTGTTG
TTGTTATTCTGTTTGCAGCAGTGCGGATCGATGGTGACACCATCATCAAT
CAGAGGTTTTGGATCTCGGTGGCGTTTACAGGCCTTTGCCAAGCTGGTCC
GTTAATATGGCTCGCAGTGTTTTTCGCCAAATCAAACTTTGATTTTTCAA
TTTTGATTTCCTGATTGTCGTTAACACAGGGCCTAACCGGTGGCTTTCAC
CTGAACGTGTTCGTTTATGGTCCACGATCCAAATTTGAAAGCTCCCGATG
AAATTCGCCCGCCCATGACTTTCACGACACGTGGGCCGTTTTATTATTAT
TTATCGGGGTCCATCTTGCGCAAAAGTAAACATTTCACGAAGTAGTTATA
CGAAGTACAATATAAGCCCTTTTTTTTGCCAGCCCTGGAACTGTCGAAAG
CGCAACAACACATTCAGCACGAGGCGCGTACTGCCTTTTGGATATGTTTT
CAATATTAATCATTTGATCGCCCCGTCCATGTAAAAAACAAGTGGGTGCC
CGCGGCTTGTTTTCGTCTCAAGCGTGTTGTGATGCCATGGTCAAATAACT
TACGGGAGTACGTAACAGCGGCGTTTCAGCCCCGTGGTGCCGTTGCCCTT
TTCCCGCAAGAGCAGTACAGTATTCTCTTCGCACTTTCGAGTTCCATCAG
GGGTTTCGTCGCCCCTCTCGACCAGATACACACAACACGGTGTTACTTTG
GGTCGTATTACACGTAATGACGGTTACCAGCGACGTCGCTGCATCAGTGG
GCTGTCGTCACCTGAGACGACACCCACACACCCTTTCGCAACAGCAAAAC
GCCCAAATCATAAATCGCGCGGGCTAGCTTGATTGTAGCGTTCAGGACAT
CATCATTGCTGACGATTTTCGTCTATTTTACTGCGCGTCTTTTATTCCAG
ATGTCTGCTGCCGACATCAAGTCGGAGATCCGCGACCTCTACATCACCGG
CGCGAAGCAGGTGCGTAGACCATGGGGGTTAAGCATATCACGGGCCGCCA
AGGTGTGGAGTGGTCACACCAGGTTGCACTTTCTCAGCTGTACGACGAGA
GGGTTCGAGCAGTCGACTGTTGAAACATGTTCCGGATTGTGATGCACATG
AGATGGTATTTTTGGCTCTTTTGGTTGGCACAAAAGTTGCAGCAGCATAT
TTTTGACGGAACAACGTGTGGAACACACGAGACCCATCCGTTGTTTGTCA
TGCCTGGCTGCTGCTTTGTCACATCCCCAACGCTTATCAAGTACCGCGAA
CTCCAACGCCGCGACAGGTGGATGTTGGGGGCGGCAAGAAGGCCATCATC
ATCTTCGTACCGTACCGTCTGCTGAGGTCTTACCACAAGATCCAGACGCG
TTTGGTGCGAGAGCTGGAGAAGAAGTTCAGGTGAGAAACGATGGAGAAAC
CAAAATGTACTCTGAAGTGCCTAAGGATGTTTTTTCCAACGGCAACGGTG
GAAGTTCATCGACTCTGCATTTCGTTGGTGTTAGGCGTCCTGCGACATTA
CCGGTGTGTGTTGGGATATTGATGAAGCATGTAGATCAGCCGCTTGCAAT
GGGGGCCGTGCTGGAAAACATGTAGCCACAGCATTTACGGCTCCCTCACA
TCTCTTGTAGAGGAAGTCTCGAAGACAGTCCATCCTAAGCCAAAATGATG
TTTTAAAATTCGCTTCCCGTGAGTCACGTTTACTCCATTACCTTGATTGT
GTGCACTACATTCCTTGCAGCGGCCGCCACGTCGTGATCATCGCGACCCG
CACTATCCTCGGCAAGAGCTACGCTCGCTCCACCAAGACTCAGGGAGTCC
GCCCACGCTCGCGCACCCTCACGGCCGTCCAGGACGCCATGCTCGAGGTA
ATTTCAATCTGTGCTGGTCCATGCACTCAACCCCATGGGCTGGTTAGATG
TTACATGTAGATGCGTCTGGAATCCTATCGCCGCTGTGCCATCATATCAA
ATATAGAAAGTTTAAAAAAGGTTCTTCTAAAGTACAGTTCGGTACGTCCA
CGACCAATTTGTTGAACTTGGTTTTTGGGGAATATGGCGCAGTGGGTACT
CGCAAGAGCCCATGCAATGCATGCACGTCTGATACATGAGAAATGGCTGG
GGAAGACACCCAGCGGAAAAGAATGTGCGTCCAGCACTGCAGCGTGAGCG
GATGACGGGCGAGCATGCGAGGGGGATTTAGGGACGTGGGGGATTGCCTG
GACCGCGGAGTTCGTGTCCGCAGGACTTCTCATGACGAAGGACACTTCTT
GCGGCCATTCCTGCAGTTTTTGTGTCAGAGTGCGCTGGCTCTCACCGGCT
TGGCTGTGCTGGCTACAACCCAGGACCGAGAACGCCTTTTTCATAGTTCT
TCGAAGAAAATGTCTTGCACGCGAGGCGCCGAGGCAGTACTACTTATGCA
ACGCCCGACCCGGGTTCACCCGCTACATGGATAGTGTCGACCCTGTCGTT
TCATTAAAAACCCCACGTCTCATTTCGTACATTCGAAAGCTCTTTTCTGG
TGTTGCTGCGTCTGGCCCGACCGCTGACGAACAAATCCTCGGCAGTTTTA
CTCGGCTGTCCGCCTTATCGACAACGGCTGCCTCCGACACGTGGGTTTGC
CGCCGGTCTAATGTTCCGTGTCTGTTGATCCGCAGGACCTCGTGTTCCCC
ACCGAGATCGTTGGCAAGCGCACACGGTGCAAGATTGACGGCTCGAAGTT
GCTCAAGGTCCAACTCGATCCCAAGGACCAGGTGAGGATAGGACCATTTC
GTTGCTCTTCGTACAGTTTGAGGTCATTGTGGCCCAAGACTAACCTTGAG
GTTCTGGCGATGTGAGCTTCTGAAATCGGCACGCACAACTCTTGCAGCAA
CAATAACGCCTTCGACAGAGCATTCGGTCAACAGCGAGTGACGAGGCTTC
ATACTCCAGACGCCCCCTCCTGTTCGTGCATACAGCAGAGTAAAGCTTCG
TGTGCTGCTGATTGTATCGACTCCCTTACGGGTCTTTCTTGTGCGTATTC
TCAACCTCCGCGTCGAATCATTTCGGAGGTTTAAGTGCACGGTATTTTTT
TGTCGATTGTAGTTTGTTTTGCGAACATGCTTCTCGAACCTGGTCGAGGT
TGAAGCTTGTTTTCCCCAACATCTGCAACGTCGAACTTGCGATATGGTCT
CGTGATGTCCACGTGTCACGTGCAATACTTGCTTGTACCCGCGTTTTATC
TCGTACTTGACAGGTGAACGTGGAGACGAAGCTCGACACCTTTTCCTCGG
TGTACAAGAAGATCACCAACAAGGACGTTGTGTTCGAGTTCCCGGTGCAA
GACCCATAAACGCAGATAGAGCCCCTTGGCATGTCGTTGCTCATACACGG
ACAGCGTGTGACGTTGGCGCCGCATTTCTAACAAGTTTTTGAGCGTGCAT
TCAATTTTGCCTATTGTGGCGTTGGCCGTGCAGCATGGCCGATTTGGTCG
TTCTTTGGACGAACCCACCATTCCGCGACATGTACCTAGCTCCTGCTGGT
GGGTCATACGACTCACTCCTTGCCTCTCTGTACCTTTCGAGGGGTTTCTC
GAGGATGCGCACCGCTCGAGCTGCCTGGTGTATGTCACGATCGTTGTTTT
CTGGGGACGCCTGGACAGGCGAGACACGCGCGAGAAAATTATTCCCAGTG
CCCTCAACAAGCCATACACAATACTTCACGTTTCACAGAGCTACAGCCGT
GAAGTCAGGTGATCCGAAGGGGTCACTTATTTGATACCCCGCATAATACA
TTTGGCTCAGCGAGGGCGTTCATGCAAATAGGGTGCGGTCGTCGGAGCCA
TCACTTGCTTAAGCGGGGATGGTAAATGTGGTGAACATGGTGTCTCCTCT
CTCCGGTCCAATGGAAAGGGGCGTTAACGAAAAACCATCAGATAGTGGCG
ATTGATATCAAGAAGTATGCCATCCAGCTAAATGTTTTCGACCAGCAAAC
GCCCTGGTTGTGTTCAATAATGGTGCGTTGACGCCCGCAAAAAAAAGTAT
TATGGACCCGAGGATATTGTCATCGCGTTCCTTGAAGGAATCTTAATCTT
TCCTCAAACCGCCACGATGTATGGACTTGAACGGAAAAGTGTCGTAGCAC
CTGCTCTTTGGCGAATTTTTTGCAACGTCTCTCTTTCGTGTTCCTTGCAA
GGTTCTGGAGCAGAGCCCCAAACCGGGGTCTTCTCTGATTTCTCAGTACA
GCGCTACCTTCACGCACTTCTTTGCTTCCCGTGGGTTGGGTAGTTGCAGT
GGGCGTCAAACAAGGCGATGTTGGTCGGCTCGGCAAAACGTTGGGTCTGG
CCGTTTCTCCAAAACGCCTTGAGAATCACCAAAAAAACGTCTCAAAAAAT
TCCGATGTGGAGGCTTTCAACCGGTGAAAAGGAATTTTTCGCGGGTGCCC
CCATCTGCTTTCCGATCGTGTGGTAATGTGTTCGTGGCATTACTCAAAAC
CTCGGTTTTGGGCTCTGCTCCAGATCCTCGGTAGGACAGCAAACAATCCG
C
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Coding sequence (CDS) from alignment at P-littoralis_Contig669:127419..133819-

>mRNA_P-littoralis_Contig669.36.3 ID=mRNA_P-littoralis_Contig669.36.3|Name=mRNA_P-littoralis_Contig669.36.3|organism=Pylaiella littoralis U1_48|type=CDS|length=660bp|location=Sequence derived from alignment at P-littoralis_Contig669:127419..133819- (Pylaiella littoralis U1_48)
ATGTGGTTTCAACAAGCAACGCAGTACTGCACTCAGGTTCCCTCTCTCCT
GTCTGTCCCCGCTGTCTCAGGCACCATGTTCACGGGAGCGACGAAGATCG
TCAAGCCTGAGGGCCAGGAGGCCGATGAGTTTGAGCAGACGGTAGCCCAG
GAGCTTTTCAACCTCGAGATGTCTGCTGCCGACATCAAGTCGGAGATCCG
CGACCTCTACATCACCGGCGCGAAGCAGGTGGATGTTGGGGGCGGCAAGA
AGGCCATCATCATCTTCGTACCGTACCGTCTGCTGAGGTCTTACCACAAG
ATCCAGACGCGTTTGGTGCGAGAGCTGGAGAAGAAGTTCAGCGGCCGCCA
CGTCGTGATCATCGCGACCCGCACTATCCTCGGCAAGAGCTACGCTCGCT
CCACCAAGACTCAGGGAGTCCGCCCACGCTCGCGCACCCTCACGGCCGTC
CAGGACGCCATGCTCGAGGACCTCGTGTTCCCCACCGAGATCGTTGGCAA
GCGCACACGGTGCAAGATTGACGGCTCGAAGTTGCTCAAGGTCCAACTCG
ATCCCAAGGACCAGGTGAACGTGGAGACGAAGCTCGACACCTTTTCCTCG
GTGTACAAGAAGATCACCAACAAGGACGTTGTGTTCGAGTTCCCGGTGCA
AGACCCATAA
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