mRNA_P-littoralis_Contig669.29.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig669.29.1
Unique NamemRNA_P-littoralis_Contig669.29.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: UPI001CF3474D (uncharacterized protein LOC114950185 isoform X3 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3474D)

HSP 1 Score: 172 bits (436), Expect = 1.220e-51
Identity = 80/164 (48.78%), Postives = 111/164 (67.68%), Query Frame = 1
Query:   67 VYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLTNLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            +Y GH   H L +QSV+ P+G++A ++GP  GRRHDA +L  S L   L  +   N   Y ++GD AY I  H+   FRGA+LT  Q+ +N +++K R+ VEW FGK++Q F ++DF +NLK+ LQP+AKYY +  LL N HTCL+GS TG YFD++ PSLE Y
Sbjct:    1 MYSGHKRVHSLKFQSVMAPNGIIAHLFGPIEGRRHDAFMLGESNLLPLLDRMVKPNGDPYVVYGDPAYGITRHIISPFRGAHLTRPQQLFNAEMNKCRICVEWGFGKILQYFTYLDFQRNLKVLLQPVAKYYLVGALLINCHTCLYGSLTGTYFDLEPPSLETY 164          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: UPI00106A10C3 (uncharacterized protein LOC114539446 n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106A10C3)

HSP 1 Score: 177 bits (450), Expect = 1.420e-51
Identity = 87/168 (51.79%), Postives = 116/168 (69.05%), Query Frame = 1
Query:   58 QEQVYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLT-NLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            Q  ++ GH   H + +QSVV P+G++  ++GP  GRRHDA +L  SGL  +L  ++  EN   + L+GD AYP+ SH+   FRGA L+  Q+ +NR +S VR SVEW FGK+VQ F F+DFSKNLK+ LQP+ K Y +AVLLTN HTCL+GS TG +F +  P LEAY
Sbjct:  171 QRIMFSGHKRTHCIKFQSVVTPNGLICNLFGPIEGRRHDAFMLTASGLLEQLQLHMNNENGEPFVLYGDPAYPVRSHLLAPFRGAQLSPTQQQFNRHMSSVRTSVEWGFGKIVQYFAFMDFSKNLKVLLQPVGKLYCVAVLLTNCHTCLYGSQTGHFFGVDPPQLEAY 338          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: A0A6S7L092_PARCT (DDE Tnp4 domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7L092_PARCT)

HSP 1 Score: 174 bits (442), Expect = 2.740e-51
Identity = 83/167 (49.70%), Postives = 114/167 (68.26%), Query Frame = 1
Query:   58 QEQVYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLTNLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            Q+ ++ GH   H + +QSV  P+G++  ++GP  GRRHDA +L  SG+  +L  +Q  N   Y ++GD AY +  ++   FRG +LT AQ+ +N+++SKVRVSVEW FGK+ Q F F+DF KN K+ LQPIAKYY +  LL N HTCL+GS T  YFD+Q PSLE Y
Sbjct:   93 QQIMFSGHKRTHCIKFQSVHAPNGLILNMFGPIEGRRHDAFMLGVSGIMDKLRRIQQPNGEPYVIYGDPAYGVTDNILAPFRGVDLTVAQKEFNKRMSKVRVSVEWGFGKIAQYFAFLDFKKNQKILLQPIAKYYLVGSLLINCHTCLYGSQTSSYFDVQPPSLETY 259          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: UPI000A2A66BF (protein ALP1-like isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A66BF)

HSP 1 Score: 177 bits (450), Expect = 5.700e-51
Identity = 85/167 (50.90%), Postives = 114/167 (68.26%), Query Frame = 1
Query:   58 QEQVYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLTNLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            Q  +Y GH   H L +QSV  P+G++A ++GP  GRRHDA +L  SGL  +L  LQ  N   Y ++GD AY +  ++   FRGA LT  Q+ +NR++SK+RV+VEW FGK+ Q F F+DF KN+K+ LQP+ KYY +A LLTN HTCL+ S TG YF++  PSLE Y
Sbjct:  228 QRIMYSGHKRVHCLKFQSVQAPNGLIAHLFGPIEGRRHDAFMLGESGLADKLRPLQRPNGEPYVIYGDPAYGLTRNILAPFRGAQLTHDQQEFNRRMSKLRVAVEWGFGKICQQFAFLDFKKNMKVLLQPVGKYYVVAALLTNCHTCLYNSQTGRYFELYPPSLEDY 394          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: UPI00077A7035 (uncharacterized protein LOC107333236 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A7035)

HSP 1 Score: 172 bits (436), Expect = 6.270e-50
Identity = 81/167 (48.50%), Postives = 113/167 (67.66%), Query Frame = 1
Query:   58 QEQVYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLTNLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            Q+ +Y GH   H + +QSV  P+G++A ++GP  G+RHDA +L  SGL  +L   Q  N   Y ++GD AY +  ++   +RG  LTD Q+ +N Q+SK+R  VEW FGK+ Q+F F+DF KNLK+ LQPI KYY +AV+L N HTCL+GS TG YF++  P+LE Y
Sbjct:  132 QQIMYSGHKRTHCIKFQSVQAPNGLIAHMFGPIEGKRHDAFMLGVSGLADKLRRFQRPNGEPYVIYGDPAYGLSRNILAPYRGVRLTDDQQEFNSQMSKMRCCVEWGFGKISQLFAFLDFKKNLKVLLQPIGKYYLVAVILINCHTCLYGSQTGAYFNLDPPTLETY 298          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: UPI001CF1F378 (protein ALP1-like isoform X1 n=3 Tax=Acropora TaxID=6127 RepID=UPI001CF1F378)

HSP 1 Score: 172 bits (436), Expect = 1.770e-49
Identity = 85/167 (50.90%), Postives = 110/167 (65.87%), Query Frame = 1
Query:   58 QEQVYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLTNLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            Q  ++ GH   HGL +QSVV P+G++A ++GP  GR HDA +L  S L  RL    A  P+ + L+GD AYP+  H+   +RGA LT  Q+ +N ++SKVR SVEW FGKVVQ F F+DF KNLK+ LQP+ KYY +  LL N HTCL+GS T  YF +Q P L  Y
Sbjct:  174 QRILFSGHKRTHGLKFQSVVCPNGLIANLFGPVAGRHHDAFMLHESNLIPRLQAKFAALPI-FTLYGDPAYPLCQHILGPYRGAQLTPDQQLFNERMSKVRESVEWSFGKVVQYFAFLDFRKNLKVLLQPVGKYYVVGSLLINCHTCLYGSVTSSYFGLQPPDLGTY 339          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: UPI000C039C62 (uncharacterized protein LOC111324059 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C039C62)

HSP 1 Score: 169 bits (429), Expect = 4.970e-49
Identity = 83/164 (50.61%), Postives = 110/164 (67.07%), Query Frame = 1
Query:   67 VYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLTNLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            +Y GH   H L +QSV  P+G++A ++GP  GRRHDA +L  SGL   L   +  N   Y ++GD AY I  ++   FRGA LT  Q+ +N Q+SKVR SVEW FGK++Q F ++DF KNLK+ LQ +AKYY + VLLTN HTCL+GS T  +F++  PSLE Y
Sbjct:  122 MYSGHKRTHCLKFQSVHAPNGLIAHLFGPIEGRRHDAFMLGESGLIHILQRFRKPNGEPYIIYGDPAYGITRNILAPFRGARLTADQQEFNSQMSKVRCSVEWGFGKIIQNFAYLDFKKNLKVLLQSVAKYYVVGVLLTNCHTCLYGSPTSTFFNLDPPSLETY 285          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: A0A6J8AX30_MYTCO (DDE Tnp4 domain-containing protein n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AX30_MYTCO)

HSP 1 Score: 171 bits (433), Expect = 5.500e-49
Identity = 79/168 (47.02%), Postives = 115/168 (68.45%), Query Frame = 1
Query:   58 QEQVYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRL-TNLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            Q  +++GH   H + +QS+V P+G++A ++GP  GRRHDA LL  SG+ G L T++       Y ++GD AYP+ +H+ + FRG  ++ AQ  +N+++S VR  VEW FGK++ +F F+D+ KNLKL LQP+ KYY +  +L N HTCL+GS TG YFD+  PSLE Y
Sbjct:  176 QRILFNGHKRVHAIKFQSIVAPNGLVANMYGPIEGRRHDAGLLRESGICGELQTHMTTPTGDIYVIYGDPAYPMTTHIIKTFRGGVISAAQARFNKKISAVRTCVEWTFGKILTLFAFLDYKKNLKLYLQPVGKYYLVGTILVNCHTCLYGSETGHYFDIDPPSLENY 343          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: UPI00077A71E6 (uncharacterized protein LOC107340903 n=3 Tax=Acropora TaxID=6127 RepID=UPI00077A71E6)

HSP 1 Score: 172 bits (435), Expect = 8.260e-49
Identity = 82/168 (48.81%), Postives = 112/168 (66.67%), Query Frame = 1
Query:   58 QEQVYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLTN-LQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            Q  ++ GH   H L +QSVV P+GM+  ++GP  GRRHDA +LA SGL  +L   L   N   Y ++GD AYP+  H+   FRGA LT  +  +N+ +S VR+SVEW +GK+V+ F F+DF+KNLK+ LQP+ K Y +  +L N HTCL+GS TG +FD+  PSLE Y
Sbjct:  221 QRIMFSGHKRVHCLKFQSVVSPNGMICHLFGPVEGRRHDAFMLAESGLLPKLERRLNKPNGEPYVIYGDPAYPVRRHILAPFRGARLTPDEERFNKDMSTVRISVEWGYGKIVRYFAFLDFNKNLKVLLQPVGKMYVVGAILANCHTCLYGSQTGDFFDLDPPSLETY 388          
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Match: UPI00077A99CC (uncharacterized protein LOC107345875 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A99CC)

HSP 1 Score: 167 bits (422), Expect = 2.900e-48
Identity = 77/167 (46.11%), Postives = 112/167 (67.07%), Query Frame = 1
Query:   58 QEQVYDGHHCAHGLAWQSVVFPHGMMA-IWGPEVGRRHDALLLARSGLNGRLTNLQAENPVQYKLFGDAAYPIISHVDRGFRGANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIAKYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAY 555
            Q  ++ GH   H + +QS+  P+G++A ++GP  GRRHDA +L  S L  +L      N   Y ++GD AYPI  ++   FRG NLT  ++ +NR++SKVRV+VEW FGK+ Q F ++DF KNLK+ LQP+ KYY +A +L N HTCL+GS T  +F+++ P+LE Y
Sbjct:   95 QRIMFSGHKRTHCIKFQSIQAPNGLIAHMFGPIEGRRHDAFMLGMSDLLPKLQGFVQPNGQPYVIYGDPAYPITCNILAPFRGVNLTIQEQEFNRKMSKVRVNVEWGFGKICQNFAYLDFKKNLKVLLQPVGKYYLVATILINCHTCLYGSQTSSFFELEPPTLETY 261          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig669.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001CF3474D1.220e-5148.78uncharacterized protein LOC114950185 isoform X3 n=... [more]
UPI00106A10C31.420e-5151.79uncharacterized protein LOC114539446 n=1 Tax=Dendr... [more]
A0A6S7L092_PARCT2.740e-5149.70DDE Tnp4 domain-containing protein n=1 Tax=Paramur... [more]
UPI000A2A66BF5.700e-5150.90protein ALP1-like isoform X1 n=2 Tax=Exaiptasia di... [more]
UPI00077A70356.270e-5048.50uncharacterized protein LOC107333236 n=1 Tax=Acrop... [more]
UPI001CF1F3781.770e-4950.90protein ALP1-like isoform X1 n=3 Tax=Acropora TaxI... [more]
UPI000C039C624.970e-4950.61uncharacterized protein LOC111324059 n=1 Tax=Stylo... [more]
A0A6J8AX30_MYTCO5.500e-4947.02DDE Tnp4 domain-containing protein n=2 Tax=Mytilus... [more]
UPI00077A71E68.260e-4948.81uncharacterized protein LOC107340903 n=3 Tax=Acrop... [more]
UPI00077A99CC2.900e-4846.11uncharacterized protein LOC107345875 n=1 Tax=Acrop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig669contigP-littoralis_Contig669:102201..102767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog7668.SPU_016560-tr
PFAMsDDE_Tnp_4
Model size568
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.19e-43
EggNOG OGs2AWDH@1|root,2RZYI@2759|Eukaryota,3A38W@33154|Opisthokonta,3BS4I@33208|Metazoa,3D9UV@33213|Bilateria
DescriptionDDE superfamily endonuclease
Cds size567
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791390.404969-CDS-P-littoralis_Contig669:102200..1027671680791390.404969-CDS-P-littoralis_Contig669:102200..102767Pylaiella littoralis U1_48CDSP-littoralis_Contig669 102201..102767 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig669.29.1prot_P-littoralis_Contig669.29.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig669 102201..102767 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig669.29.1

>prot_P-littoralis_Contig669.29.1 ID=prot_P-littoralis_Contig669.29.1|Name=mRNA_P-littoralis_Contig669.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=189bp
GSSTGHSGGTAAQGGDPAVQEQVYDGHHCAHGLAWQSVVFPHGMMAIWGP
EVGRRHDALLLARSGLNGRLTNLQAENPVQYKLFGDAAYPIISHVDRGFR
GANLTDAQRTYNRQLSKVRVSVEWQFGKVVQMFPFVDFSKNLKLRLQPIA
KYYAIAVLLTNAHTCLFGSTTGFYFDMQAPSLEAYFAF*
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mRNA from alignment at P-littoralis_Contig669:102201..102767-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig669.29.1 ID=mRNA_P-littoralis_Contig669.29.1|Name=mRNA_P-littoralis_Contig669.29.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=567bp|location=Sequence derived from alignment at P-littoralis_Contig669:102201..102767- (Pylaiella littoralis U1_48)
GGTTCATCGACGGGACACTCAGGAGGAACTGCCGCCCAGGGGGGGGACCC AGCAGTGCAGGAGCAGGTGTACGACGGTCACCACTGTGCTCACGGTCTTG CTTGGCAATCGGTTGTGTTTCCGCACGGAATGATGGCGATCTGGGGGCCG GAGGTTGGGCGGCGGCATGACGCCCTTCTTCTAGCAAGGAGCGGACTCAA CGGGCGACTCACCAATCTGCAGGCAGAAAACCCTGTGCAGTACAAGTTGT TCGGCGATGCTGCGTATCCCATCATCAGTCACGTCGACCGGGGTTTCCGC GGCGCGAACCTTACAGATGCGCAGAGGACCTACAACAGACAGCTCTCGAA GGTCAGGGTCTCAGTGGAGTGGCAATTCGGAAAAGTCGTTCAGATGTTCC CGTTTGTCGACTTCAGCAAGAATCTGAAGCTAAGGCTGCAGCCGATCGCG AAGTACTACGCCATAGCTGTACTGCTGACGAACGCGCACACCTGCCTCTT CGGGAGCACTACGGGCTTCTACTTCGACATGCAGGCCCCGTCACTAGAGG CGTACTTTGCGTTCTAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig669:102201..102767-

>mRNA_P-littoralis_Contig669.29.1 ID=mRNA_P-littoralis_Contig669.29.1|Name=mRNA_P-littoralis_Contig669.29.1|organism=Pylaiella littoralis U1_48|type=CDS|length=567bp|location=Sequence derived from alignment at P-littoralis_Contig669:102201..102767- (Pylaiella littoralis U1_48)
GGTTCATCGACGGGACACTCAGGAGGAACTGCCGCCCAGGGGGGGGACCC
AGCAGTGCAGGAGCAGGTGTACGACGGTCACCACTGTGCTCACGGTCTTG
CTTGGCAATCGGTTGTGTTTCCGCACGGAATGATGGCGATCTGGGGGCCG
GAGGTTGGGCGGCGGCATGACGCCCTTCTTCTAGCAAGGAGCGGACTCAA
CGGGCGACTCACCAATCTGCAGGCAGAAAACCCTGTGCAGTACAAGTTGT
TCGGCGATGCTGCGTATCCCATCATCAGTCACGTCGACCGGGGTTTCCGC
GGCGCGAACCTTACAGATGCGCAGAGGACCTACAACAGACAGCTCTCGAA
GGTCAGGGTCTCAGTGGAGTGGCAATTCGGAAAAGTCGTTCAGATGTTCC
CGTTTGTCGACTTCAGCAAGAATCTGAAGCTAAGGCTGCAGCCGATCGCG
AAGTACTACGCCATAGCTGTACTGCTGACGAACGCGCACACCTGCCTCTT
CGGGAGCACTACGGGCTTCTACTTCGACATGCAGGCCCCGTCACTAGAGG
CGTACTTTGCGTTCTAG
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