prot_P-littoralis_Contig669.25.4 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig669.25.4
Unique Nameprot_P-littoralis_Contig669.25.4
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length688
Homology
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: D7G467_ECTSI (Mitochondrial helicase twinkle n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G467_ECTSI)

HSP 1 Score: 1019 bits (2636), Expect = 0.000e+0
Identity = 501/630 (79.52%), Postives = 562/630 (89.21%), Query Frame = 0
Query:   61 MQYKLAGTQVVVKECPFCDNIGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEAGYVDAVSITFPWIVNQKDMPPQEFKGLQKFVEGKYGGQSILED-VTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPLVDDPSPPKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFAGRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTR---GAKRQGPFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREM 686
            M++++AG +VVVKECPFC + G K DNMWKL IGL++GGAWMCHRC+ASGSWYDLK RAGSGGAR VS+  +P S +  RN+P PRR  G      Q QR AGLRPIPD +R  SYP +LLH+PRF+ V +YL+G++PGQRGI++ VL KYGVG A Y+YP EAGYV+A SITFPWIVN+KD+PP+E KGL+KFV+ KYG +S + D VTVRVK+RA+ NK+WQRLDPAGGR GIFGLHTVPD ATEVVLTEGE+DAMAVYQAT  PAVSLPNGASSLPLEVLPLLERF+KIYLWMDHDG GQAGVDKF+ KLG RRC VVRPL DDP+PPKDANEALLAGRN+++FL+GA+ TKHDDIQTFQDLRQ V+HELQNPLEYSGT LQSFP+FT+IIKGLR GELTV+TGPTGSGKTTILSQLSLDLAA GLSTLWGSFEIKNTRL+QKM+ QFAGRP+AD+  SPDSL AVADRF ALPLSF+RFHGGT+VDEV+DAMDYAVYANDVQHIILDNLQFMLTR++R   G KR GPFDKFDAQDLALDKFRKFAT+HNVHITLVIHPRKEDEG+KLTTSSIFGSAKATQEADLVVILQ+QKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRE+
Sbjct:    1 MEFRVAGGEVVVKECPFCHDTGGKADNMWKLYIGLNNGGAWMCHRCAASGSWYDLKRRAGSGGARFVSQVAMPRSSTSTRNTPNPRRTHGEEFHVTQ-QRAAGLRPIPDEQRARSYPTNLLHNPRFDQVMDYLSGTEPGQRGIKKEVLVKYGVGCAVYKYPGEAGYVEAQSITFPWIVNKKDIPPEEVKGLEKFVKDKYGEKSRIPDAVTVRVKARAVRNKQWQRLDPAGGRWGIFGLHTVPDGATEVVLTEGEYDAMAVYQATGKPAVSLPNGASSLPLEVLPLLERFNKIYLWMDHDGAGQAGVDKFVLKLGTRRCLVVRPLEDDPNPPKDANEALLAGRNLQDFLDGASSTKHDDIQTFQDLRQKVIHELQNPLEYSGTGLQSFPRFTRIIKGLRRGELTVLTGPTGSGKTTILSQLSLDLAAGGLSTLWGSFEIKNTRLMQKMLHQFAGRPVADLAGSPDSLRAVADRFQALPLSFLRFHGGTNVDEVIDAMDYAVYANDVQHIILDNLQFMLTRNSREGHGGKRPGPFDKFDAQDLALDKFRKFATEHNVHITLVIHPRKEDEGYKLTTSSIFGSAKATQEADLVVILQNQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREL 629          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: A0A835ZLV9_9STRA (Mitochondrial helicase twinkle n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLV9_9STRA)

HSP 1 Score: 721 bits (1862), Expect = 1.630e-252
Identity = 371/654 (56.73%), Postives = 465/654 (71.10%), Query Frame = 0
Query:   37 NSTYVSKHRVLEQTEVDTFLDKCGMQYKLAGTQVVVKECPFCDNIGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEAGYVDAVSITFPWIVNQKDMPPQEFKGLQKFVEGKYG-GQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPLVDDPSPPKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFAGRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQG--PFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKED-EGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSL-EVKKNRFDGDLGEVHLVFDPHSSRLRE 685
            ++T+VS+H  L  +++  +L K  ++Y++AG+QV VK CPFC +   ++DNMWKL  G +SGGA+ CHRC ++GSWYD K R G      +  A L  S SG        RAG         + D   +P+P+ R   +Y G L+  P    V+E+LTG  PGQRGI+  VL KYGVGSA Y +P E GY +A  +TFPW   + +M  +EF  L    E   G G   ++ V  R+K RA++NK WQRLDPAGGR G+FG HTVP  ATEVVLTEGEFDA+AVYQAT +PAVSLPNG  SLP++VLP+LERF  IYLWMD+D PGQ G  KF +KLG RR  +VRP  DD +P KDANEALLAG+++   L  A   + D+I  F DLR+SV+HE+ NP+E+ GT L+SFP+ T+I+KG R GEL+V TG TG+GKTT+LSQ+SLDLA +G+STLWGSFE++NTRLV+KM+QQF GRP   +     +LSA+ DRF ALPL FM FHGGTDVDEVL+AM+YAVY NDV HIILDNLQFML+R    AKR G   +DKFDAQD+A++KFRKFAT+ NVHITLVIHPRKED E  +L+ +S+FGSAK TQEADLV+ILQ   G + L EV+KNRFDG +G V L FD  S  LRE
Sbjct:   21 HTTFVSRHVQLPLSDITEYLRKKDLEYRVAGSQVNVKRCPFCHDTRGQIDNMWKLYFGAESGGAYFCHRCGSNGSWYDFKRRVGGVEMTGLDAAALERSSSGST------RAG---------EHDTPGKPMPNQRLARAYAGQLMSHPGKARVREFLTGKAPGQRGIDRAVLLKYGVGSAVYSFPTEHGYREADCVTFPWHALRTEMSTEEFTELLAGTEADSGAGGQPVDSVITRLKVRAVDNKAWQRLDPAGGRWGLFGWHTVPPDATEVVLTEGEFDALAVYQATGVPAVSLPNGCRSLPVDVLPMLERFTTIYLWMDNDAPGQEGAAKFARKLGERRVRIVRPPADDAAPAKDANEALLAGKDLAALLAAARPLQRDEILHFSDLRESVLHEIMNPMEFVGTPLESFPRLTEIVKGFRQGELSVFTGGTGAGKTTVLSQISLDLARRGVSTLWGSFEVRNTRLVKKMLQQFGGRPPEALAGDAPALSALMDRFEALPLCFMGFHGGTDVDEVLEAMEYAVYVNDVSHIILDNLQFMLSRSATSAKRGGMAQWDKFDAQDIAMEKFRKFATERNVHITLVIHPRKEDDEKQRLSLTSVFGSAKMTQEADLVLILQRVAGERKLIEVRKNRFDGAVGSVPLYFDRDSGCLRE 659          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: A0A8K1FKX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKX8_PYTOL)

HSP 1 Score: 597 bits (1538), Expect = 1.090e-201
Identity = 328/653 (50.23%), Postives = 433/653 (66.31%), Query Frame = 0
Query:   37 NSTYVSKHRVLEQ-TEVDTFLDKCGMQYKLAGTQVVVKECPFCDNIGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEAG-YVDAVSITFPWIVNQKDMPPQEFKGLQKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPLVDDPSPPKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFAGRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGPFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREMG 687
            +ST+VS +  L+  TE+ +F+D+ G+  +   +  VVKECPFC     K+DN++KL I   S G + CHRC A+GSW+D K +       L    ++  SV G+ +       G  G  A+   R+A +  + D ++  +   +L  DP FE +++YL      +RGI E+VL KYGVG+    +  E G  V A  I+FPW+  Q D+   +  G+ +             DV +R+K RALE+K  QRL P GG  G+FG +TVP SA E+V+TEGEFDAMAVYQAT +PAVSLPNG  SLP  VLPLLERF KIYLWMD+D PGQA V+KF  KLGI RCF+VRP  D   P KDAN+ALLAG ++++ +  A +  HD I TF+ LR+ V  E+ NP+   G   ++ P   +++KG R GE+T++TGPTG GKTT+LSQLSLDL  +G++TLWGSFEIKNTRL+ KM+ Q AG+ +   V   ++  AVAD+F ALP+ F+RF G TDVDEVLDAM+YAVYA DVQHI+LDN+QFM+    RG      +DKF+ QD ALDKFRKFA+  NVH+TLVIHPRKE E   LT +S+FG+AKATQEAD V+ILQ  +G   L+V+KNRFDG LG + L+FD  S+ L+E G
Sbjct:    7 SSTFVSSYYQLDDATEILSFMDRKGLVRRETDSHWVVKECPFCHPTRGKVDNLFKLYIHK-SKGVYKCHRCGAAGSWFDFKQK-------LQGNVSVG-SVGGMLH-------GDGGPGASLDPREAKVISVLDNQKAMAIQRNLFDDPDFEPIRQYLIE----KRGISEQVLMKYGVGAIEQPFRNENGEQVVAKCISFPWMARQGDL---DTMGVLRSSSSPSSADKNQFDV-IRLKIRALEDKSQQRLVPKGGSWGLFGWNTVPTSAEEIVVTEGEFDAMAVYQATGMPAVSLPNGCQSLPPNVLPLLERFKKIYLWMDNDAPGQASVEKFATKLGITRCFIVRPPADSKKPIKDANDALLAGADLKKLIHLAEIIPHDQIATFEQLRRDVYEEIVNPIRACGVQSRTLPSLNRLLKGHRLGEVTILTGPTGCGKTTLLSQLSLDLCGQGVNTLWGSFEIKNTRLIHKMLTQLAGKNLRGDV---NAFEAVADKFEALPMYFLRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNVQFMMAGQGRG------YDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQRTRGQTKLDVRKNRFDGTLGSLPLMFDADSNCLKEYG 626          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: A0A1Z5K003_FISSO (SF4 helicase domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K003_FISSO)

HSP 1 Score: 579 bits (1493), Expect = 2.300e-196
Identity = 317/670 (47.31%), Postives = 426/670 (63.58%), Query Frame = 0
Query:   35 RENSTYVSKHRVLEQTEVDTFLDKC------GMQYKLAGTQVVVKECPFCDN-IGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEAGYVDAVSITFPWIVNQKDMPPQE-FKGLQKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVP--DSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPLVDDPSP------PKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFAGRPMA-DIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGP--FDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRE 685
            R  S +VSKH        +  +++         +Y+     V+++ECPFC      K +N +KL I L  GGA+ CHRC   GSW+D KA+  S   ++V  A+                     I + +      L P+P  R    Y   LL  P   +V  YLT +    RG+  + L KYG+G A Y +  +  +     +TFPWI+   D+  QE  +G++  VE      S L   T R+K RALENK WQRLDPAGG  G FG HT+   D +  +V+TEGE+DAMAV+QAT IPA+SLPNG  SLP+EVLPLLE ++KIYLWMD+DGPGQ G   F QK+G+ RCF+V+P ++          PKDAN+ALL G +++  +  A    H+ + +F DL+ SV+HE+ +P +Y GT L S PKF+ ++KGLR GELTV+TGPTGSGKTT L Q+SLDLA +G++ LWGSFE++NTRL+ K++QQFA +P+      S D L  +A RFG LPL F++FHG ++++EVLDAM+YAVY +D +HI+LDNLQFM++R    A R G   FDKFDAQD+A++KFRKFAT+ NVH++LV+HPRKEDE  +L  SSI+GSAKATQEAD V+ILQ     K L+V+KNRF GDLG   + FD  ++R RE
Sbjct:   20 RHKSVFVSKHNQSLNVTAEDIINQVKWNVESSPKYRTTNNHVILEECPFCTKPTKGKAENTFKLYIQL-GGGAYFCHRCGQGGSWFDFKAKT-SKDPQVVKSASQT-------------------IYSPKMHASQPL-PMPSSRLQALYNSQLLDQPD-NDVLRYLTET----RGLTVKTLRKYGIGRAKYSFNNDGAWEPVECVTFPWIMKASDVSFQEELRGVKHPVEDP---NSFL---TRRIKVRALENKAWQRLDPAGGGWGFFGYHTLDGADKSQPIVVTEGEYDAMAVWQATGIPAISLPNGCRSLPVEVLPLLEDYEKIYLWMDNDGPGQEGARVFSQKIGLGRCFMVQPTLESTGCLEFADLPKDANDALLQGHDLKRIIMEAKPVPHEQVLSFSDLQDSVLHEILHPEKYEGTKLPSLPKFSAVVKGLRRGELTVVTGPTGSGKTTFLGQMSLDLAEQGVNVLWGSFEVRNTRLIHKLLQQFARQPLPRGDPSSADKLKDIAKRFGELPLHFLKFHGASELEEVLDAMEYAVYVHDCEHIVLDNLQFMISRQNL-ASRSGNSNFDKFDAQDIAIEKFRKFATERNVHLSLVVHPRKEDESARLGISSIYGSAKATQEADNVLILQKDNQKKYLDVRKNRFSGDLGATEIFFDRATNRYRE 655          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: A0A1E7FNP2_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FNP2_9STRA)

HSP 1 Score: 569 bits (1466), Expect = 1.710e-192
Identity = 318/673 (47.25%), Postives = 414/673 (61.52%), Query Frame = 0
Query:   37 NSTYVSKHRVLEQTEVDTFLDKCGMQ------YKLAGTQVVVKECPFCDN-IGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRF-----------ENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEA--GYVDAVSITFPWIVNQKDMPPQEFKGLQKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPLVDDPSPPKDANEALL-AGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFA--GRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGPFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGN-KSLEVKKNRFDGDLGEVHLVFDPHSSRLRE 685
            +S +VS+H        DT +D C          +   T VV++ECPFC     ++  N++KL+I +  GGA+ CHRC   GSWYDLKA+                              GG  +       D       D + + S                       +V  YLT      RG+  + L KYGVG   Y++P +   GY +   ITFPWI+  +++P   F                   VT R+K+RALE K WQRLDP GG  G+FGLHT+P+ ATE+VLTEGE+DAMAV QAT   AVSLPNG  SLP++ LPLLERFDKIYLWMD+D PG+ G +KF +KLG+ R ++V+ L       KDAN+ALL    ++ + +E AT+T HD I TF+DLR  V+ EL  P +YSGT + S P+FT+IIKG R GE+TV+TGPTG+GKTT L Q+SLDLA +G + LWGSFEIKNTRL+ K+M+QF+    P++  V + +   A+ADRF  LPL FM+FHGG+D+DEVLDAM+YAVY NDV+HIILDN+QFM+TR+ +    +  FDKF+ QDLA++KFRKFAT+HNVH+TLV+HPRKED   KL+ SS FGSAKATQEAD V+I+Q+     K L++KKNRFDG LG   + F   S R  E
Sbjct:   24 SSAFVSRHNHSLNITPDTIVDYCSSHGASVEGARTTSTHVVLRECPFCPKPTRNEASNLYKLHIQI-GGGAYFCHRCGTGGSWYDLKAK-----------------------------FGGFNVERDHPNND-------DSKNIDSTNDXXXXXXXXXXXXXXXXXXKNDVLRYLTEV----RGLNTKTLRKYGVGKGAYQFPCDVSGGYRETECITFPWIM--REIPTGAF-------------------VTRRIKARALEKKAWQRLDPPGGGWGLFGLHTIPNDATEIVLTEGEYDAMAVSQATGRHAVSLPNGCRSLPVQTLPLLERFDKIYLWMDNDEPGREGAEKFAKKLGVNRTYIVQCL-----EAKDANDALLNKDIDLNQVIENATLTPHDRIVTFKDLRNDVLQELLEPDQYSGTPVPSLPRFTQIIKGFRRGEMTVLTGPTGAGKTTFLGQVSLDLAEQGENVLWGSFEIKNTRLLHKLMKQFSRDSLPVSTEVNAREKFEALADRFETLPLYFMKFHGGSDMDEVLDAMEYAVYVNDVEHIILDNMQFMITRNGK----KSSFDKFEVQDLAIEKFRKFATEHNVHVTLVVHPRKEDAAAKLSISSFFGSAKATQEADTVIIIQNDANRRKCLDIKKNRFDGTLGFSPIYFQSKSGRYVE 625          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: K3WZ52_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ52_GLOUD)

HSP 1 Score: 568 bits (1463), Expect = 1.690e-190
Identity = 315/673 (46.81%), Postives = 420/673 (62.41%), Query Frame = 0
Query:   33 VYRENSTYVSKHRVLEQT-EVDTFLDKCGMQYKLAGTQVVVKECPFCDNIGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGS-------------GGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEAGYVDAVS-ITFPWIVNQKDMPPQEFKGLQKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPL----VDDPSPPKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFAGRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGPFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREM 686
            V    +T+VS +  LE   E+  FL +  +  +   T  VV++CPFC     K DN++KL +   + G + CHRC ASGSW+D K++  S             GGA  ++ A LP  +  + N+                             +  +   +LL +P F++V  YLT +    RGI++ VL KYGVG+    +  + G ++    I+FPW+  Q+D+   +  G+    E    G   L +V +R+K RA+++K  QRL P GG  G+FG +TVP ++ E+V+TEGEFDAMAVYQAT +PA+SLPNG  SLP  VLPLLERF KIYLWMD+D  GQA V+KF  K+G+ RC++VRP          P KDAN+ALLAG ++   +  A    H  I TF +LR+ V  E+ NPL   G   ++ P   +++KG R GE+TV+TGPTG GKTT+LSQLS+DL  +G+STLWGSFEIKNTRL+ KM+ Q AGR +   + + +S    AD+F ALP+ FMRF G TDVDEVLDAM+YAVYA DVQHI+LDN+QFM+    RG      FDKF+ QD ALDKFRKFA+  NVH+TLVIHPRKE E   LT +S+FG+AKATQEAD V+ILQ  +GN  L+V+KNRFDG LG + L FD  S+ LRE+
Sbjct:    6 VQANRNTFVSSYYQLEDPQEIAEFLGRKKLVSRETDTHFVVRDCPFCHPTHGKADNIFKLYV-QKAQGVYKCHRCGASGSWFDFKSKLQSNIAVNSMEGVMHGGGASSIAEAMLPKVIQALDNA-----------------------------KAMAIQQNLLEEPEFQSVLRYLTET----RGIKKEVLQKYGVGAIEQPFRNDVGDLETSKCISFPWMARQQDL---DAMGVICDSETPQSGDKNLFNV-IRLKIRAVDDKAKQRLVPKGGSWGLFGWNTVPTASDEIVITEGEFDAMAVYQATGMPAISLPNGCQSLPPSVLPLLERFKKIYLWMDNDASGQANVEKFSSKIGVTRCYIVRPSPPVGAQRTKPIKDANDALLAGLDLGAIVRAAERIPHSQITTFDELRREVYEEILNPLRACGVQSRTLPSLNRLLKGHRMGEVTVLTGPTGCGKTTLLSQLSIDLCGQGVSTLWGSFEIKNTRLMHKMLNQLAGRSLQGDINAFES---AADKFEALPMYFMRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNIQFMMAGQGRG------FDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQRTRGNSKLDVRKNRFDGTLGSIPLTFDSESNCLREL 631          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: B8LE42_THAPS (Predicted protein n=2 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LE42_THAPS)

HSP 1 Score: 564 bits (1453), Expect = 8.370e-190
Identity = 310/655 (47.33%), Postives = 407/655 (62.14%), Query Frame = 0
Query:   57 DKCGMQYKLAGTQVVVKECPFCDN-IGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAA----QRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEAG-------YVDAVSITFPWIVNQKDMPPQEFKGLQKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPLVD---DPSPPKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQF------AGRPMADIV-----QSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGPFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRE 685
            D     ++   + V+++ECPFC      ++DN +KL + +  GGA+ CHRC A GSWYD K+  G       S A      SG       R+   N I +       + + G+          +Y GS+L         +YLT +    RG++  VL KYGVG A+Y + ++ G       YV ++ +TFP   +   +P                          R+K R++E K WQRLDP GG  G+FG HTVP +ATE+++TEGEFDAMAVYQAT  PAVSLPNG  SLP+EVL LLE FD +YLWMD+DGPG+ G + F +KLG+ RC +V+P       P PPKDANEALL G +I E LE A+   H+ I  F DLR  V+HE+ NP +Y GT + S P FT +IKG R GELTV+TGPTGSGKTT L Q SLDL  +G++ LWGSFEIKNTRL+ K++QQ+       G    D+       +  +L+++AD+F +LP+ FM+FHGG+DVD+VLDAM+YA Y +DV+HIILDN+QFM++R +   K    FDKFD QD+A++KFRKFAT++NVH+TLV+HPRKEDEG KL  SS +GSAKATQEAD V+ILQS    K ++VKKNRFDG +G   L F   S R  E
Sbjct:   88 DASSSDFRYTSSHVILQECPFCPKPTKGRVDNQYKLYVSV-GGGAYFCHRCGAKGSWYDFKSELGGFSVEQHSNACANSDSSGQGG----RQQASNSINSQPWNWNTKNNNGM----------NYLGSIL---------QYLTNT----RGLDRSVLRKYGVGCASYNFHSKDGSTVSGASYVSSMCVTFPCSTHGPYIPR-------------------------RIKVRSIEKKAWQRLDPPGGGFGLFGWHTVPHNATEIIITEGEFDAMAVYQATGRPAVSLPNGCRSLPMEVLLLLENFDTVYLWMDNDGPGREGAEMFARKLGVERCLLVQPSGKRGAPPEPPKDANEALLTGWDINELLEEASELPHERILKFSDLRDQVIHEIINPEKYRGTPIPSLPGFTSLIKGFRRGELTVLTGPTGSGKTTFLGQTSLDLVEQGINVLWGSFEIKNTRLMHKLLQQYMKDVLPVGLAEKDLSVEERQNAMTALTSLADKFESLPMYFMKFHGGSDVDDVLDAMEYAAYVHDVEHIILDNMQFMISRQSVEGKGSS-FDKFDMQDIAIEKFRKFATEYNVHVTLVVHPRKEDEGAKLGMSSFYGSAKATQEADTVLILQSDGKRKFVDVKKNRFDGTIGHSPLYFQRKSGRYSE 688          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: A0A5D6XVL9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVL9_9STRA)

HSP 1 Score: 561 bits (1446), Expect = 1.840e-187
Identity = 315/661 (47.66%), Postives = 417/661 (63.09%), Query Frame = 0
Query:   38 STYVSK-HRVLEQTEVDTFLDKCGMQYKLAGTQVVVKECPFCDNIGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEAG-YVDAVSITFPWIVNQKDMPPQEFKGL------QKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRP----LVDDPSPPKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFAGRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGPFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREM 686
            ST+VS  H+  E  ++  FL +  +  +   T  VV+ECPFC     + DN++KL +    G  + CHRC ASGSW+D K++       L S   +  S  G+ +       GGN I  A   +   +    D  +  +   +LL +P F+ V  YLT     QRGI   VL KYGVG+    +  E G  V A  I+FPW+  Q D+   +  G+       +   G   G   L +V +R+K RA+++K  QRL P GG  G+FG +TVP ++ E+V+TEGEFDAMAV+QAT +PA+SLPNG  SLP  VLPLLERF K++LWMD+D  GQA V+KF  K+G+ RC++VRP    +     P KDAN+ALLAG ++ + + GA    H  I TF +LR+ V  E+ NPL   G   ++ P   +++KG R GE+TV+TGPTG GKTT+LSQLS+DL  +G+STLWGSFEIKNTRL+ KM+ Q AGR +   +++       AD+F ALP+ FMRF G TDVDEVLDAM+YAVYA DVQHI+LDN+QFM+    RG      FDKF+ QD ALDKFRKFA+  NVH+TLVIHPRKE E   LT +S+FG+AKATQEAD V+ILQ  +G   L+V+KNRFDG LG + L +D  SS L+E 
Sbjct:   31 STFVSSYHQPAEPHDIAAFLSRKLLPARETDTHFVVRECPFCHPTHGRADNLFKLYVHKAQG-VYKCHRCGASGSWFDFKSK-------LQSNVGVS-SADGVLHG------GGNSIADAAAPK---VIQALDNAKAMAIQKNLLEEPEFKAVLTYLTE----QRGIRLDVLQKYGVGAIEQPFRNENGDQVPAKCISFPWMARQHDL---DAMGVICDDLASRPAGGTANGDKNLFNV-IRLKIRAVDDKSKQRLVPKGGSWGLFGWNTVPTASDEIVITEGEFDAMAVHQATGLPAISLPNGCQSLPPSVLPLLERFSKVFLWMDNDASGQANVEKFASKIGVARCYIVRPSAASVTTAGKPVKDANDALLAGLDLAQIMHGAERIPHSQITTFDELRREVYEEILNPLRACGVQSRTLPSLNRLLKGHRMGEVTVLTGPTGCGKTTLLSQLSIDLCGQGVSTLWGSFEIKNTRLIHKMLNQLAGRSLEGDIKA---FEGAADKFEALPMYFMRFFGSTDVDEVLDAMEYAVYAYDVQHILLDNIQFMMAGQGRG------FDKFERQDAALDKFRKFASQKNVHLTLVIHPRKEQEDVDLTLTSVFGTAKATQEADNVLILQRTRGKSKLDVRKNRFDGTLGSIPLGYDSESSSLKEF 656          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: A0A6A3F712_9STRA (Twinkle protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3F712_9STRA)

HSP 1 Score: 551 bits (1421), Expect = 5.030e-184
Identity = 318/665 (47.82%), Postives = 417/665 (62.71%), Query Frame = 0
Query:   40 YVSKH-RVLEQTEVDTFLDKCGMQYKLAGTQVVVKECPFCDNIGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARA-GSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRY-PAEAGY-VDAVSITFPWIVNQKDM------------PPQEFKGLQKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVR-PLVDDPSPPKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFAGRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGPFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREMG 687
            ++S+H ++ +  +V  FL +  +  +   +  VV++CPFC     K DN++K+ +    G  + CHRC A+GSW+D K +  GS G      A    S            AG  G +A  +   A      D  +  +   +LL DP FE+V +YLT      RG+ + VL KY VG+    +   E+G  V+A  I+FPW+  Q DM            P  E K L               DV VR+K RA+E+K  Q+L P GG  G+FG +TVP +A E+VLTEGEFDAMAV+QAT IPAVSLPNG  SLP  VLPLLERF +IYLWMD+D  GQ+ V+KF  KLG+ RC++VR P     SP KDAN+AL AG ++   ++ A    H  I TF++LR+ V  E+ NPL   G   ++FP   +++KG R GE+TV+TGPTG GKTT+LSQLSLDL  +G+STLWGSFEIKNTRL+ KM+ Q A R ++  V   ++  A AD+F ALP+ F+RF G T+VDEVLDAM+YAVYA DVQHI+LDN+QFM+    RG      FDKF+ QD ALDKFRKFA+  NVH+TLVIHPRKE E   LT +S+FG+AKATQEAD V+ILQ  +G   L+++KNRFDG LG + L FDP S+ L E+G
Sbjct:   43 FMSRHYQMQDPRDVGDFLRRKSLAVRETDSHFVVRDCPFCHTTHGKADNLFKMYVHKTQG-VYKCHRCGAAGSWFDFKRKLQGSVGVASAGSALYGGSS-----------AGAPGFSAEVKVIQA-----LDNEKAMAIQKNLLDDPEFESVLKYLTDV----RGLSKEVLQKYCVGAIEQPFWDHESGERVNAKCISFPWMARQMDMGAMGVVCQDQQKPATEDKNLY--------------DV-VRLKIRAVEDKAKQQLVPKGGSWGLFGWNTVPTAANELVLTEGEFDAMAVHQATGIPAVSLPNGCQSLPPSVLPLLERFKRIYLWMDNDASGQSNVEKFASKLGMTRCYIVRMPANASSSPAKDANDALRAGLDLGAIVKSAERIPHSQITTFEELRRDVYEEIVNPLRACGVQSRAFPSLNRLMKGHRMGEVTVLTGPTGCGKTTLLSQLSLDLCGQGVSTLWGSFEIKNTRLMHKMLTQLAQRNLSGDV---NAFEAAADQFEALPMYFLRFFGSTEVDEVLDAMEYAVYAYDVQHILLDNVQFMMAGQGRG------FDKFERQDAALDKFRKFASAKNVHLTLVIHPRKEQEDQDLTLTSVFGTAKATQEADNVLILQRTRGESKLDIRKNRFDGTLGSIPLKFDPDSASLCEVG 662          
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Match: A0A1V9YIU2_9STRA (Twinkle protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YIU2_9STRA)

HSP 1 Score: 548 bits (1413), Expect = 7.240e-184
Identity = 310/650 (47.69%), Postives = 413/650 (63.54%), Query Frame = 0
Query:   39 TYVSKHRVL-EQTEVDTFLDKCGMQYKLAGTQVVVKECPFCDNIGDKLDNMWKLNIGLDSGGAWMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGGNGITAAQRQRDAGLRPIP--DPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQRGIEERVLTKYGVGSATYRYPAEAGYVDAVSITFPWIVNQKDMPPQEFKGLQKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTVPDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDKIYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPLVDDPSPPKDANEALLAGRNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFTKIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNTRLVQKMMQQFAGRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDEVLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGPFDKFDAQDLALDKFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQSQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLRE 685
            T+VSK+  + + T +D FL + G+  K   T  VV++CPFC     K DN+WKL +   +G  ++CHRC ASGSW+ L+ + G+          +P ++               G + + R +D   + I   D  +  +   +L  D   ++V +YL  +    RG++  VL KY VG+    +  +AG V    +TFPW+    D+      G++   +      + L +V VR+K RA+++K  QRL P GG  G+FG +TVP SAT +V+TEGEFDAMAVYQAT +PAVSLPNG  SLP  VLPLLERF+ IYLWMD D  GQ  +DKF+QKLG+ R ++VR      S  KDAN+ALL+  N++  ++ A    H  I TF +LR+ V+ EL NPL  SG   ++ P     +KG R GE+TV+TGPTG GKTT+LSQLS+D  A+G+STLWGSFEIKNTRLV KM+ Q AG P+A  +   D     AD F  LP+ F+RF G TDVDEVLDAM+YAVYA+DVQHI+LDN+QFM++   RG      +DKF+ QD ALDKFRKFAT  NVHITLV+HPRKE +   L+ SS+FG+AKATQEAD V+ILQ  +G   L+++KNRFDG LG + LVFD  S+ LRE
Sbjct:   40 TFVSKYYEMPDHTIIDDFLRRKGLALKETPTHYVVRDCPFCHATKGKPDNLWKLYVAKTNG-VYLCHRCGASGSWFSLRQKMGA-------NDVVPAAM---------------GYSDSMRYQDDEPKVISVLDNNKAIALQRNLHEDDDCKHVLDYLKTT----RGLKPEVLKKYCVGAIEQPFYDDAGQVHKWCVTFPWMARDADLA---LMGVE--ADANMSADANLFNV-VRLKVRAIDDKSKQRLVPKGGSWGLFGWNTVPASATSIVVTEGEFDAMAVYQATGLPAVSLPNGCRSLPPAVLPLLERFETIYLWMDSDVHGQDSLDKFVQKLGVPRTYIVR------SQAKDANDALLSEMNLQAAIDKAERKPHAQIATFDELRRDVLEELLNPLRASGVQSRTLPALNTYMKGFRNGEVTVLTGPTGCGKTTLLSQLSIDWCAQGVSTLWGSFEIKNTRLVHKMLTQMAGEPLACNLALFDK---TADAFEQLPMYFLRFFGSTDVDEVLDAMEYAVYAHDVQHILLDNIQFMMSGQGRG------YDKFERQDAALDKFRKFATAKNVHITLVVHPRKEQDDTDLSLSSVFGTAKATQEADNVLILQRIRGEVKLDIRKNRFDGTLGSIPLVFDRQSNCLRE 641          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig669.25.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G467_ECTSI0.000e+079.52Mitochondrial helicase twinkle n=2 Tax=Ectocarpus ... [more]
A0A835ZLV9_9STRA1.630e-25256.73Mitochondrial helicase twinkle n=1 Tax=Tribonema m... [more]
A0A8K1FKX8_PYTOL1.090e-20150.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1Z5K003_FISSO2.300e-19647.31SF4 helicase domain-containing protein n=2 Tax=Fis... [more]
A0A1E7FNP2_9STRA1.710e-19247.25p-loop containing nucleoside triphosphate hydrolas... [more]
K3WZ52_GLOUD1.690e-19046.81Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
B8LE42_THAPS8.370e-19047.33Predicted protein n=2 Tax=Thalassiosira pseudonana... [more]
A0A5D6XVL9_9STRA1.840e-18747.66Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3F712_9STRA5.030e-18447.82Twinkle protein n=5 Tax=Phytophthora TaxID=4783 Re... [more]
A0A1V9YIU2_9STRA7.240e-18447.69Twinkle protein n=1 Tax=Achlya hypogyna TaxID=1202... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 458..671
e-value: 0.0037
score: 26.5
NoneNo IPR availablePFAMPF13155Toprim_2coord: 308..397
e-value: 7.0E-7
score: 29.5
NoneNo IPR availableGENE3D3.40.1360.10coord: 293..413
e-value: 4.0E-24
score: 87.0
NoneNo IPR availablePFAMPF13481AAA_25coord: 443..623
e-value: 3.3E-21
score: 75.7
NoneNo IPR availablePANTHERPTHR12873:SF0TWINKLE PROTEIN, MITOCHONDRIALcoord: 34..682
NoneNo IPR availableSUPERFAMILY56731DNA primase corecoord: 290..402
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 439..687
e-value: 2.0E-44
score: 153.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 447..676
IPR027032Twinkle-like proteinPANTHERPTHR12873T7-LIKE MITOCHONDRIAL DNA HELICASEcoord: 34..682
IPR007694DNA helicase, DnaB-like, C-terminalPROSITEPS51199SF4_HELICASEcoord: 435..687
score: 46.71603
IPR006171TOPRIM domainPROSITEPS50880TOPRIMcoord: 305..390
score: 9.836308
IPR034154Archaeal primase DnaG/twinkle, TOPRIM domainCDDcd01029TOPRIM_primasescoord: 306..382
e-value: 1.97806E-10
score: 55.3542

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig669contigP-littoralis_Contig669:90003..108484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig669.25.4mRNA_P-littoralis_Contig669.25.4Pylaiella littoralis U1_48mRNAP-littoralis_Contig669 89037..108589 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig669.25.4 ID=prot_P-littoralis_Contig669.25.4|Name=mRNA_P-littoralis_Contig669.25.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=688bp
MLRVFRRLCRPTRAQSPPTACSWSHLPPATAEVYRENSTYVSKHRVLEQT
EVDTFLDKCGMQYKLAGTQVVVKECPFCDNIGDKLDNMWKLNIGLDSGGA
WMCHRCSASGSWYDLKARAGSGGARLVSRATLPPSVSGIRNSPTPRRAGG
NGITAAQRQRDAGLRPIPDPRRVGSYPGSLLHDPRFENVKEYLTGSKPGQ
RGIEERVLTKYGVGSATYRYPAEAGYVDAVSITFPWIVNQKDMPPQEFKG
LQKFVEGKYGGQSILEDVTVRVKSRALENKRWQRLDPAGGRCGIFGLHTV
PDSATEVVLTEGEFDAMAVYQATNIPAVSLPNGASSLPLEVLPLLERFDK
IYLWMDHDGPGQAGVDKFIQKLGIRRCFVVRPLVDDPSPPKDANEALLAG
RNIREFLEGATVTKHDDIQTFQDLRQSVMHELQNPLEYSGTVLQSFPKFT
KIIKGLRTGELTVITGPTGSGKTTILSQLSLDLAAKGLSTLWGSFEIKNT
RLVQKMMQQFAGRPMADIVQSPDSLSAVADRFGALPLSFMRFHGGTDVDE
VLDAMDYAVYANDVQHIILDNLQFMLTRDTRGAKRQGPFDKFDAQDLALD
KFRKFATDHNVHITLVIHPRKEDEGHKLTTSSIFGSAKATQEADLVVILQ
SQKGNKSLEVKKNRFDGDLGEVHLVFDPHSSRLREMG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR027032Twinkle-like
IPR007694DNA_helicase_DnaB-like_C
IPR006171TOPRIM_domain
IPR034154TOPRIM_DnaG/twinkle