mRNA_P-littoralis_Contig669.16.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: D7G470_ECTSI (HDAC_interact domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G470_ECTSI) HSP 1 Score: 1680 bits (4350), Expect = 0.000e+0 Identity = 936/1266 (73.93%), Postives = 1029/1266 (81.28%), Query Frame = 2
Query: 635 MTGDDQQENGPAPPRSIHSSQGATGAHRGGQVDTPSGRSTGWLTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGISDIERLEDEYQATERAARSDHGGGAALGHA-GDGDRSVMSVQSGDESDLEDRTVEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQ--ARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGR--STAHRGYQGNYGSRS---NGGTGIDPDRYTSKTQYTSQSLTLNQR--RRLGKGRQMWSRAEDYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDNDWTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAA-DIADALPVKNDPISTA-SRPQSKEGIRALRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALATSKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHESSRSSGDERKGDRQASSPIVTDEAVVI-PVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDFYLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIGYRTLLGHLYDLLEEKITTERYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQATQSQGISPVIYRNHAQELLCHSEKEVVRVQYHPGVPK-AAGWLVKPELKMEFIGRMGTEAKQEGALDTDSTNDGIAQNDAAMA 4390
M GD+ N APP + +SQGA GA G Q R+ WLTVNDAMDYLDAVKLEFR QPE YDEFLAIMGRFK+KQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEG+KI DI+R+EDE E AA+ ++ GG A GHA GDGDRSVMSVQSG+ESD E+R +EFDHAI+YVTTIKRRFS+++GTYKAFLEILHTYQR+QQDT SGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLD AAVEAE RLGRA NGQR QRL H PQ G QRG+ R +PANSSR QS G+R QQR SSS+YR+D+D +Q+WREQR YGR + RGY G YGSRS NGGTG +PDR Y + QR R+ KGRQMWS+AEDYELGPDGVFKGP KR RE DDAG A GRGW DSQG TIKTSPANQLFD ARDVLSSSGDD DWTEFLKCLDLFSNEILGRDELL++V DLFEAHDGF+LMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELP+DYQ T+CSGR+ EDAVLNDTW SVPVGSEDS +FKHMRRNPNEEQLFK+EDERFELDMLID VA+AIARLEP EEEIEALRAT GSALGQ AA A TS EGAS+ + + GDV LP+FQ+RLD+RTLG LHLST+SRLYGDHGPEVVDLLRKNPAVA+PVVLKRLR KEEEWC AREEA GWKELAQKHFH+SLDHR+++FRREDKR TSNRALLQEIKDRKV+EDPQ+AAVVKAARE VHS +QK VL+LGR SPTSTAAD DS++GQGS GE DTAALDGS A A D LPVK+D +T SRP+SKEGIR LR QAEQ PWYMFAHLTL YP EG+ +HKDIMELLTHTLARRPPSEDDVRQAST VADLLPAFF+L S QAAN E A GNGG A+ SSGDERKGDR+ S VT+E + P QG AK D++GR SS PLPQGQ+++FTTTDFYLVLRMHHLLAERLAEAKKLC EAGLSRQTVVA+PQEVLRASAG+ T + + GDKEEIGY+T LGHLYDLLEEKI TERYEEGVRQLVGNQGYVLC+LDKLVVGLLQNLYRASADKVF+KLTQLYYYE+ TQ++G+ P IYR H QELL SEKEVVRVQYHPG K + GWL++P LKMEF+GR+GTEA QEGA++TDS DG AQN+A A
Sbjct: 1 MAGDNG--NHAAPP-AAGASQGAVGARAGAQDSRQCPRNGRWLTVNDAMDYLDAVKLEFRHQPEIYDEFLAIMGRFKTKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGFKIEPDDIQRMEDE----ECAAKEENAGGTAPGHAAGDGDRSVMSVQSGEESDPEERAMEFDHAIHYVTTIKRRFSDDVGTYKAFLEILHTYQRQQQDTHSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDSAAVEAEVRLGRALNGQRGQRLSTHAPQGGSQRGRLDGRARPANSSRGQSRGHRTQQRV-LGGSSSTYRSDDD-EQEWREQRAYGRGRTNTQRGYHGGYGSRSQYSNGGTGSEPDR----NPYAGNNHMQTQRGGRQARKGRQMWSQAEDYELGPDGVFKGPKKRTRESDDAGGAG-GRGWSSMDSQG-TIKTSPANQLFDQARDVLSSSGDDTDWTEFLKCLDLFSNEILGRDELLDMVQDLFEAHDGFDLMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPQDYQVTSCSGRSPNEDAVLNDTWVSVPVGSEDSGSFKHMRRNPNEEQLFKVEDERFELDMLIDGVASAIARLEPAEEEIEALRATAGSALGQN-AAPAATSREGASSISGPDGGDVVLPQFQYRLDRRTLGALHLSTISRLYGDHGPEVVDLLRKNPAVAIPVVLKRLRLKEEEWCVAREEAKGGWKELAQKHFHRSLDHRSYNFRREDKRHTSNRALLQEIKDRKVDEDPQKAAVVKAAREKVHS-AQKDVLILGRVSPTSTAADGDSINGQGSTGETDTAALDGSAAATATDSPGTLPVKSDDTATTGSRPRSKEGIRVLRHQAEQTSPWYMFAHLTLKYPQEGTPGIHKDIMELLTHTLARRPPSEDDVRQASTTVADLLPAFFSLGRSNQAANGEGSTALGGNGGCAQ----------------------SSGDERKGDRRRSPQSVTNEGTALTPDPQGCVPAK--------DSEGRASSNPLPQGQEVMFTTTDFYLVLRMHHLLAERLAEAKKLCSEAGLSRQTVVASPQEVLRASAGVTGTGMHAANGDKEEIGYKTFLGHLYDLLEEKINTERYEEGVRQLVGNQGYVLCSLDKLVVGLLQNLYRASADKVFHKLTQLYYYERTTQTEGVVPAIYRGHVQELLSRSEKEVVRVQYHPGAQKPSGGWLLEPALKMEFLGRVGTEATQEGAIETDSATDGTAQNEAVAA 1219
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: A0A1Z5JWN0_FISSO (Paired amphipathic helix protein Sin3a n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWN0_FISSO) HSP 1 Score: 400 bits (1027), Expect = 7.120e-113 Identity = 373/1257 (29.67%), Postives = 535/1257 (42.56%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGISDIERLEDEYQATERAARSDHGGGAALGHAGDGD-----------------------------------------RSVMSVQSGDESDLEDRTVEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRSNGGTGIDPDRYTSKTQYTSQSLTLNQRRRLGKGRQMWSRAEDYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDND--WTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMV-HSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKNDPISTASRPQSKEGIRALRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALATS---KQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDS---DHESSRSS------GDERKGDRQASSP------IVTDEAVV-------------------------------IPVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDFYLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIGYRTLLGHLYDLLEEKITTE----RYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQATQSQGISPVIYRNHAQELLCHSEKEVVRVQYH 4240
L V DA+ YLD VK EF+ QP Y+EFL IM FK++++ P VI V++LFRG N L+L FN FLPEGYKI + D+++ E E QA E A + A AG ++ V + + VEFDHAI+YVT IKRRF+ + Y FL+ILH YQREQ+ GI VLEQ+ LF D PDLL+EFT+FLPD VQ QAKERL RAA E+E R +A+ +Q +H+ K+ T S L +RA+ E KR+ E D + ++ Q FD ++ L++ D W EFLKCLD+++ +IL R E+L V L +L +EFK ++ G+ P ++ ++ L+EI+F + C+PSYR LP+DY CS R+ E VLND W S+PVGSE+S F+HMRRN EE LF++EDERFE+DM++D AA + RL P+ EEI L L +A+S++ +G GA RFQ+ D +TLG +H +T+SR+YGD G E+++L+ KNP VA+P+V++RL+QK+ EW A RE WKELA+ +++KSLDHR +R DKR TS R ++ EIKDR + + +K E + Y + +G DT A N ++ +P + H++L Y E ++ V +D +L L R S D + + + L +F L+ + + A +E A K IA P++S DD+S + E++ S GD+ + D + P I D ++ +PV + G K E + R + P G +L F T YL R+H +L +RL AK+L + Q S G Y L LY L+ + T +YE+ VR L+G+ Y L LDKL+ + +NL + D+ L QLY Q T + P +R A L S+ EV+ H
Sbjct: 223 LRVEDALIYLDDVKREFKQQPAIYNEFLLIMKNFKTQEVDTPGVIERVSKLFRGYNKLILGFNTFLPEGYKISLEDLQKKEAEEQAMEAAEVASKTNEAPPVVAGPPAAKPAPIRKMAALPTAQVKAKSPPKPIKTAPVAAPVRSSPTLKAKAPVAQQPAPPQQHQAVEFDHAISYVTKIKRRFANDPSIYHQFLQILHNYQREQR----GIKEVLEQVAHLFQDHPDLLKEFTFFLPDAVQEQAKERLHRAAAESEHRKRQAEE---IQEREIHR--------------------------------------------------------------------------------------KSNSTDPSPRLID----------MTRAQQEEAS--------RKRSLE----------------DPESCVYNSAVERQFFDATKEALTAYTRDGGQAWAEFLKCLDMYAQDILSRQEMLNFVEPLLGKRHT-KLFEEFKRILASAGQPRPT-EESWYSVPLAEIDFSRCRRCSPSYRALPRDYPSHPCSDRSPEEAKVLNDVWVSLPVGSEESYTFRHMRRNTYEETLFRVEDERFEIDMVLDSNAATLQRLLPIAEEIAILAKEETLPL-DIMASSSDATGLGAK-------------RFQYTFDSKTLGVIHRNTISRIYGDSGGEMLELMVKNPTVAIPLVVQRLQQKDREWRAVRERLNRHWKELAELNYYKSLDHRGLTWRNIDKRATSTRIMISEIKDRAANGGAEGSEALKQKLEKAKEEHGTFYEVTMG-----------------------DTMAT-----------------NLDLTFLPKPDRR----------------IFTPHMSLFY--ENNSWVQRDAFRILAFALERGSTSPADKERCHRLWVEFLGPWFGLSLNWMQQPAVAYQESTAAS----QTKVSIASSAPLVSEDDESMVNNAEATEKSAVDNANGDDDETDHHSLPPDTIVSTIYGDGTILEYRKAERIYVVQLLSCGAKGYLRPTSILCSLLPVEKSGYTQK-----LRESDRTRLARP----GDQLAFGTQSLYLFFRLHLILVQRLNTAKRLAYSVDKDSSLITLIEQVPTGNSKATGRAR------------YEAYLSLLYASLDGGVGTSAEGGKYEDRVRSLLGHGAYELATLDKLISYIWKNLQSLAGDETMWNLIQLYRRHQETGT--FHPEAFRQEAAFL---SDGEVMYAFQH 1248
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: G4YSZ3_PHYSP (HDAC_interact domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=G4YSZ3_PHYSP) HSP 1 Score: 404 bits (1038), Expect = 1.620e-112 Identity = 382/1283 (29.77%), Postives = 575/1283 (44.82%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGI-SDIERLEDEYQATERAARSDHGGGAAL--GHAGDGDRS---VMSVQSGDESDLEDRT------------------------------------------VEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRSNGGTGIDPDRYTSKTQYTSQSLTLNQRRRLGKGRQMWSRAE-DYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDNDWTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKNDPISTASRPQSKEG-IRALRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALATSKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHESSRSSGDERKGDRQASSPIVTDEAVVIPVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDF----------YLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIG-YRTLLGHLYDLLEEKITTERYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQATQSQGISPV-------IYRNHAQELLCHSEKEVVRVQYHPGV--------------------------------PKAAGWLVKPELKMEFIGRM 4309
L V DA+ YLD VK +F DQP+ Y++FL +M FK++ + P VI+ V+ LFRG +L+L FN FLP GY+I + IE + + +S + G A +A G R + +L T VEFDHAI+YVTTIK+RF++E TYK FL ILHTYQ+EQ+ I VL+Q++ LF D PDLLREFT+FLPD VQ QAKERL+RAA +A+ R Q Q K SS+ +R R SS++ + M +D YG+ + RGY+ D R + K L +R + RA+ +++ + G +RA + + +F+ + +L S ++W EFLKCL+L+S E+L R+E+L L+ +LF H EL++EF L+ G ++ P++ P + L+E + + TPSYR LP Y CS R+A+E V ND+W SVP GSED + FK MR+N EE LFK EDERFE+DM+I+ A+ I+ LEP+ EIE L+ + NGD + + +DK T HL+ ++R+YGD G E++DLLRK PA A+PV+LKRL+QK+EEW ARE+ WKE+ +K++HKSLDH + +F+++DK+QTS + ++QE K +K+E D +R K ASP++ +A A+ VS + A+DIADAL + + S A++ + +G + A Q + W H + S +HK+ LL++ A + S D + S V FF L EEE A L V + E + ++ KG + + +A + P +E A P P L Q D+ Y LR++ +L RL A LC +A +R P A+ + S KE+ G Y+ + LY L++ + +YE+ R L+G+ Y L +DKLV +L+ + + D +LT+ + Q P Y N + + + R++++PGV P+++ WL++PEL +E++G M
Sbjct: 245 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLILGFNTFLPPGYRIRPDTSIEVIPSQMGGRGGVQQSMYSGVGAQQSSNANMGHRPPPVTIXXXXXXXXELHKPTPSSRQQLAPAGQMKAGXXXXXXXXXXXXXXXXNAAARSSTNPVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQR----SIRQVLDQVSHLFRDHPDLLREFTFFLPDAVQEQAKERLNRAAEKAQQRKD--------------------QMAQKARKYGTSSQGYQQSDRRDDRGADSPSSAAMKGGRMMVEDEDAYMKYGKKGSGRGYKD------------DDHRLSGKA--------LERREKXXXX--XXXRAQFNHKRAKRRPYDGKERRAYL-----------------AISDVLLDKEEWNIFEKIKKILPSR---DNWREFLKCLELYSQEVLDRNEMLSLIRNLFGRHT--ELVEEFDHLLCSHG-VQKTPKEIWPFIPLAETDLSQCRRATPSYRGLPASYPIPPCSHRSALEKQVCNDSWVSVPTGSEDFS-FKSMRKNQYEEALFKCEDERFEIDMVIEANASTISVLEPLAHEIEVLKKS---------------------------NGDDD-KMWNYVVDKGTFRVTHLNAITRIYGDAGTEILDLLRKYPAGAIPVILKRLKQKDEEWRRAREDLNRQWKEVNEKNYHKSLDHSSFYFKQKDKKQTSMKMMMQEAK-KKLEADEKRIEEAKTTESS--------------ASPSTVSATAEVVSAKAPPQ-------------ASDIADAL--RKEQSSAAAKIPAADGKVAAALSQPVSSGKWK--PHFVYKF---ASVQIHKEAFGLLSYA-AEKNLSVADKEKISKVWQAFFFPFFHL--------EEEWLVRKPQRTTVTLEKAKTLSVGTEVSTEFGEGTVQQYNKEKGYFTINLAAIGCQAYLQP----------GALTIQEAADFPPGLPALDSKQDAAKVKADYKSLFYGNQHAYAFLRLYQVLHNRLERAFDLCEKAKRNRNRRTINP-----AARALAHAHHSLSASTKEKTGDYQAFVSKLYSLIDGSVDNSKYEDSCRSLMGSTSYFLFTMDKLVTLVLKQMQHLANDDTCQELTKAFTEVQGEPKPSTDPAGAEAKATAYLNKTKSIF--EGEGAFRIEFNPGVLRKTPLEARGGTTPSGASEPFKIWAPSPRVKAPESSKWLIEPELAIEYLGSM 1368
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: A0A421GSE3_9STRA (HDAC_interact domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GSE3_9STRA) HSP 1 Score: 397 bits (1020), Expect = 3.700e-111 Identity = 387/1286 (30.09%), Postives = 576/1286 (44.79%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGI-SDIERLEDEYQATERAAR----SDHGGGAALGHAGDGDR----------------------------------------------SVMSVQSGDESDLEDRT--VEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRSNGGTGIDPDRYTSKTQYTSQSLTLNQRRRLGKGRQMWSRAEDYELGPDGVFKGPTKRA-REPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDNDWTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKNDPISTASRPQSKEGIRALRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALATSKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHESSRSSGDERKGDRQASSPIVTDEAVVIPVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDF----------YLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIG-YRTLLGHLYDLLEEKITTERYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQATQSQGISPVIYRNHAQELLCHSE-----KEVVRVQYHPGV-------------PKAAG--------------------WLVKPELKMEFIGRM 4309
L V DA+ YLD VK +F DQP+ Y++FL +M FK++ + P VI+ V+ LFRG +L+L FN FLP GY+I + IE + + A S GG +A G R V + +G + T VEFDHAI+YVTTIK+RF++E TYK FL ILHTYQ+EQ+ I VL+Q++ LF D PDLLREFT+FLPD VQ QAKERL+RAA +A+ R + + + QSG Q+ S R+D R+ G S + +G G D D Y K + + RR GK + R E + KRA R P D + R + + +F+ + +L S ++W EFLKCL+L+S E+L R+E+L L+ +LF H EL+DEF L+ G ++ P++ P + L+E + + TPSYR LP Y CS R+A++ +V ND+W SVP GSED + FK MR+N EE LFK EDERFE+DM+I+ A+ I+ LEP+ EIE L+ S EG WS + +DK T HLS ++R+YG+ G +++DLLRK PA A+PV+LKRL+QK+EEW ARE+ WKE+ +K++HKSLDH + +F+++DK+QTS + ++QE K +K+E + + KA S ++ +A+P A+DIADAL K + + AS+P + I+ Q W H + S +HK+ LL++ A + S D + S V FF L EEE A LPV + E + ++ KG + V +A + P + +E A P P L + T D+ Y LR++ +L RL A LC +A +R T + + A+ + S KE+ G Y+ L LY L++ + + +YE+ R L+G+ Y L +DKLV +L+ + + D +LT+ + EQ +S+ + + L ++ + R++++PGV P A WL++PE+ +E++G M
Sbjct: 39 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLILGFNTFLPPGYRIRPDTSIEVIPSQISARGGGGNIPMYSGVGGQQQSSNANMGHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQMKTGGKPKKQQVPTPGAGGNAASRSSTNPVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQR----SIRQVLDQVSHLFRDHPDLLREFTFFLPDAVQEQAKERLNRAAEKAQQRKDL------MAQKHKYASQSGYQQ-------------------------------SRRDDG---------RSMGDSPSSAAMKGR------GLLAEDDDAYL-KYGKKDAGMYKDDRRLSGKALE---RREKXXXXXXXRAQFNHKRAKRRPYDG---KERRAYLALSD---VLLDKEEWGIFEKIKKILPSR---DNWREFLKCLELYSQEVLDRNEMLSLIRNLFGRHT--ELVDEFDHLLCSHG-VQKTPKEIWPFIPLAETDLSQCRRATPSYRGLPASYPIPPCSSRSALDKSVCNDSWVSVPTGSEDYS-FKSMRKNQYEEALFKCEDERFEIDMVIEANASTISILEPLSHEIEVLK-----------------SKEGEDDKLWS-----------YVVDKGTFRVTHLSAITRIYGESGTQILDLLRKYPAGAIPVILKRLKQKDEEWRRAREDLNRQWKEVNEKNYHKSLDHSSFYFKQKDKKQTSMKTMMQEAK-KKLEVEEKHTDATKADSSTSPSTVSATAVVSAKAAPQ-----------------------------ASDIADAL--KKEQSAGASKPPATMAIKITVAQPVPTTEWK--PHFAYKF---ASVQIHKEAFGLLSYA-AEKNLSVADKEKISKVWQSFFFPFFHL--------EEEWLVRKPQRTTLTIEKAKTLPVGTEVSTEFGEGTVQQFNKEKGFLTVNLAGVGCQAYLQP----------SAITIQEAADFPPGLPALDNLKDAAKTQADYTALFYGNQHAYAFLRLYQMLHNRLERAYDLCEKAKRNR-----TRRTINPAARALAHAHHSLAASTKEKTGDYQAFLSKLYSLIDGSVDSSKYEDCCRNLMGSTSYFLFTMDKLVTLVLKQMQHLANDDTCQELTKAFS-EQHGESKPSNLADAETKSAAYLSKTKSIFEGEGAFRIEFNPGVLRKTPLEARGGTTPSGAPMEPFKIWAPSPRVKAQEPSKWLIEPEVSIEYLGSM 1161
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: H3H283_PHYRM (HDAC_interact domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H283_PHYRM) HSP 1 Score: 399 bits (1025), Expect = 6.910e-111 Identity = 377/1281 (29.43%), Postives = 566/1281 (44.18%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGI-SDIERLEDEYQATERAARSDHGGGAALGHAGDGDRS---------------------------------------------VMSVQSGDESDLEDRTVEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRSNGGTGIDPDRYTSKTQYTSQSLTLNQRRRLGKGRQMWSRAE-DYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDNDWTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKNDPISTASRPQSKEG-IRALRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALATSKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHESSRSSGDERKGDRQASSPIVTDEAVVIPVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDF----------YLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIG-YRTLLGHLYDLLEEKITTERYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQATQSQGISPV-------IYRNHAQELLCHSEKEVVRVQYHPGV--------------------------------PKAAGWLVKPELKMEFIGRM 4309
L V DA+ YLD VK +F DQP+ Y++FL +M FK++ + P VI+ V+ LFRG +L+L FN FLP GY+I + IE + + +S + G +A G R S VEFDHAI+YVTTIK+RF++E TYK FL ILHTYQ+EQ+ I VL+Q++ LF D PDLLREFT+FLPD VQ QAKERL+RAA +A+ R + Q + ++ Q G Q+ +R R G SS++ + M D YG+ RGY+ D R + K L +R + RA+ +++ + G +RA + + +F+ + +L S ++W EFLKCL+L+S E+L R+E+L L+ +LF H +L++EF L+ G ++ P++ P + L+E + + TPSYR LP Y CS R+A+E V ND+W SVP GSED + FK MR+N EE LFK EDERFE+DM+I+ A+ I+ LEP+ EIE L + S G W+ + +DK T HL+ ++R+YGD G +++DLLRK PA A+PV+LKRL+QK+EEW ARE+ WKE+ +K++HKSLDH + +F+++DK+QT + ++QE K +K+E D +RA K S V + +P A+DIADAL K +A P + +G A+ QA + W H + S +HK+ LL++ A + S D + S V FF L EEE A LP+ + E + ++ KG + + +A + P +E A P P L Q D+ Y LR++ +L RL A LC +A +R P A+ + S KE+ G Y+ L LY L++ + +YE+ R L+G+ Y L +DKLV +L+ + + D + +LT+ + +Q P Y N + + + R++++PGV P+++ WL +PEL +E++G M
Sbjct: 247 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLILGFNTFLPPGYRIRPDTSIEVIPSQMTGRGGVQQSMYSGVGQSSNANMGHRPPPVTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRSSTNPVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQR----SIRQVLDQVSHLFRDHPDLLREFTFFLPDAVQEQAKERLNRAAEKAQQR--KDQMALKARKFG----QGGYQQS----------------DRRDDRGGDSPSSAAMKGGRLMGDDEDAYMKYGKKG--RGYKD------------DDQRLSGKA--------LERREKXXXX--XXXRAQFNHKRAKRRPYDGKERRAYL-----------------AISDVLLDKEEWNIFEKIKKILPSR---DNWREFLKCLELYSQEVLDRNEMLSLIRNLFGRHT--DLVEEFDHLLCSHG-VQKTPKEIWPFIPLAETDLSQCRRATPSYRGLPASYPIPPCSHRSALEKRVCNDSWVSVPTGSEDYS-FKSMRKNQYEEALFKCEDERFEIDMVIEANASTISILEPLAHEIEVLNSKKSS---------------GDDDKLWN-----------YVVDKGTFRVTHLNAITRIYGDSGAQILDLLRKYPAGAIPVILKRLKQKDEEWRRAREDLNRQWKEVNEKNYHKSLDHSSFYFKQKDKKQTGMKMMMQEAK-KKLEADEKRAEESKTDSSAAPSTVSATVAVASVKAPPQ----------------------------ASDIADALK-KEQFAHSAKAPIAADGKAAAISAQASSSAKWK--PHFAYKF---ASVQIHKEAFGLLSYA-AEKNLSVADKEKVSKVWQAFFFPFFHL--------EEEWLVRKPQRTTVTLEKAKTLPMGTEASTDFGEGTVEQFNKAKGYFSINLATIGCQAYLQP----------GAITIQEAAAFPPGLPALDSKQDAAKVQADYKSRFYGNQHAYAFLRLYQMLHNRLERAFDLCEKAKRNRNRRTINP-----AARALAHAHHSLSASTKEKTGDYQAFLSKLYSLIDGSVDNSKYEDSCRSLMGSTSYFLFTMDKLVTQVLKQMQHLANDDICQELTKAFGEQQGEPKPSADPAGAEAKAAAYLNKTKSIF--EGEGAFRIEFNPGVLRKTPLEARGGSTPSGFSEPFKIWAPSPRVRAPESSKWLFEPELAIEYLGSM 1366
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: A0A3M6VN31_9STRA (HDAC_interact domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VN31_9STRA) HSP 1 Score: 394 bits (1012), Expect = 3.120e-109 Identity = 375/1267 (29.60%), Postives = 571/1267 (45.07%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGI-SDIERLEDE-----------YQATER-----------------------------AARSDHGGGAALGHAGDGDRSVMSVQSGDESDLEDRT----VEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRSNGGTGIDPDRYTSKTQYTSQSLTLNQRRRLGKGRQMWSRAEDYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDNDWTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKNDPISTASRPQSKEGI-RALRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALATSKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHESSRSSGDERKGDRQASSPIVTDEAVVIPVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDFYLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIG-YRTLLGHLYDLLEEKITTERYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQATQSQGISPV-------IYRNHAQELLCHSEKEVVRVQYHPGV--------------------------------PKAAGWLVKPELKMEFIG 4303
L V DA+ YLD VK +F DQP+ Y++FL +M FK++ + P VI+ V+ LFRG +L+L FN FLP GY+I + IE + + Y A + A+R G + G + + + R+ VEFDHAI+YVTTIK+RF++E TYK FL ILHTYQ+EQ+ I VL+Q++ LF D PDLLREFT+FLPD VQ QAKERL+RAA +A+ R + Q QR ++ +SS +R R SS++ ++ M D Y + + R Y+ D R + K L +R + RA+ F + R D+ A + + +F+ + +L S ++W EFLKCL+L+S E+L R+E+L L+ +LF H +L++EF L+ G ++ P++ P + L+E + + TPSYR LP Y CS R+A+E V ND+W SVP GSED + FK MR+N EE LFK EDERFE+DM+I+ A+ I+ LEP+ EIE L+ E+G + + +DK T HL+ ++R+YGD G ++++LLR+ PA A+PV+LKRL+QK+EEW ARE+ WKE+ +K++HKSLDH + +F+++DK+QTS + ++QE K +K+E D +RA KAA ASP++ +A VS + A+DIADAL + S P K I +A+ A H + S +HK+ LL++ A + S D + S V FF L EEE A LP+ + E + + K + V +A + P + A D S+ + ++ + L + Y LR++ +L RL A LC +A +R P A+ + S KE+ G Y+ + LY L++ + +YE+ R L+G+ Y L +DKLV +L+ + + D V +L + + Q P+ Y N + + + R++++PGV P+A+ WL+KPEL +E++G
Sbjct: 236 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLILGFNTFLPPGYRIRPDTSIEVIPSQMAGRGGVQPSMYGAQQSSNTNMGHRPPPVTIXXXXXXXXXXXXXAPASRQQLPSGGQMKAGGKPQKMQQQAPTTSSGNATARSSTNPVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQR----SIRQVLDQVSHLFRDHPDLLREFTFFLPDAVQEQAKERLNRAAEKAQQR--KDQLAQRARKY------------------GSSSHGYQQSDRRDDRGSASPSSAAMKSGRMMGDDEDAYLKYDKKGSGRSYKD------------DDHRLSGKA--------LERREKXXXX--XXXRAQ---------FNHKRAKRRPYDEKERHAYL-------AISDVLLDKEEWSIFEKIKKILPSR---DNWREFLKCLELYSQEVLDRNEMLSLIRNLFGRHT--DLVEEFDHLLCSHG-VQKTPKEIWPFIPLAETDLSQCRRATPSYRGLPASYPIPPCSHRSALEKQVCNDSWVSVPTGSEDFS-FKSMRKNQYEEALFKCEDERFEIDMVIEANASTISILEPLALEIEVLKTNK-------------------------ESGGEDDQLWNYVVDKGTFRVTHLNAITRIYGDSGTQILELLRQYPAGAIPVILKRLKQKDEEWRRAREDLNRQWKEVNEKNYHKSLDHSSFYFKQKDKKQTSMKMMMQEAK-KKLEADEKRAEEYKAA---------------SNASPSTVSATTAVVSAKVPPQ-------------ASDIADALKKEQ------SAPSVKVPIMKAMAPIAHSTHSIKWKPHFAFKF---ASVQIHKEAFGLLSYA-AEKNLSVADKEKISKVWQTFFFPFFYL--------EEEWLVRKPQHATVTHEKAKTLPIGTEVSTEFGEGTVQQFNREKTYFTINLAAVGCQAYLQPSALTIQEAADFPSSLPALDSKQDAAKIQADYKSLFYGNQHAYAFLRLYQVLHNRLERAYDLCEKAKRNRNRRTINP-----AARALVHAHHSLSASTKEKTGDYQAFVSKLYSLIDGSVDNSKYEDSCRSLMGSTSYFLFTMDKLVAQVLKQMQHLANDDVCQELIKAFAEVQGGPKPSTDPIEAEAKITAYLNKTKSIF--EGEGAFRIEFNPGVLRKTPLEARGGTTPSGVFEPFKIWAPSPRIKAPEASKWLIKPELAIEYLG 1354
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: A0A7S3P4U3_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4U3_9STRA) HSP 1 Score: 388 bits (997), Expect = 3.650e-108 Identity = 375/1257 (29.83%), Postives = 537/1257 (42.72%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGISDIERLEDEYQATERAARSDHGGGAALGHAGDGDRSVMSVQS------------------GDESDLEDRT----------------------------------------------------VEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRSNGGTGIDPDRYTSKTQYTSQSLTLNQRRRLGKGRQMWSRAEDYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDND--WTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKL---EPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKNDPISTASRPQSKEGIRALRQQAEQNPPWYMFA-HLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALAT----SKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHE-------SSRSSGDERKGDRQ-------------ASSPIVT-------------DEAVVIPVSQGG------------------TRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDFYLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIGYRTLLGHLYDLLEEKITTE---RYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLY 4129
L V DA+ YLD VK EFR++P Y+EFL IM FK++++ P VI V+RLFRG N L+L FN FLPEGYKI ++D+ERL+ E + R A G D ++++QS ++ RT VEFDHAI+YVTTIKRRF+ + TY +FLEILHTYQ+EQ+ GI VLEQ+ LF D PDLLREFT+FLPD VQ QAKERL+RAA ++E+RL + ++ Q RAG QR + A Q GS ++ + S+T Q+ E Y V+ +R Q FD AR+ L++ D W EF+KCLD+++ EIL R E+L +V L + +L +EFK ++ G PP D+ ++ LSEI+F + C+PSYR LP+DY CS R+ E VLND W S+PVGSE+S F+HMRRN EE LF++EDERFE+DM++D AA + RL P+ EEI + L Q A S E A++ A +E + RFQ+ DK LG +H ++++R+YGD G E++DL+ KNP VA+P+V++RLRQK++EW R WK+LA+++++KSLDHR+ +R DKR TS R +L EIKDR + ++ E + + +ADSVS ++D L P +F HL+L Y E + V +D +L L R S D + + + L +F L+ S A +E + D+PV+ S++D D + R +E + + SP+ T D + ++ GG + D A + RP G +L T +L LR+HH+L RL+ A L G Q + T+ ++V G + Y L +Y LL+ + +YE+ VR L+G+ Y L LDKL+ + +NL + D+V L QLY
Sbjct: 297 LRVEDALLYLDDVKREFRNRPAVYNEFLTIMKNFKTQEVDTPGVIQRVSRLFRGYNRLILGFNTFLPEGYKISLADLERLDAERERQARLA-------VQRGEPPPEDVGLITLQSQPKQQQHPPLGVPPSAHQSQQNAAPARTKPSFPPXXXXXANAKTSTVATSANPPQARKEYAPKPPPQQPRATAAPAPTQAVEFDHAISYVTTIKRRFANDPSTYHSFLEILHTYQKEQR----GIKEVLEQVAVLFQDHPDLLREFTFFLPDAVQDQAKERLNRAAADSESRLQKEYAMRQQQXXXXXXX-------------------------XXXRAG-------------------HQRIIDMTEARAPAQDASGS--------------ARKRTLEHSVTAAQQ------------PESY------VYNSAVER--------------------------------QFFDFAREALTAYTRDGGQAWAEFMKCLDMYAQEILSRSEMLNMVEPLLGKKNA-KLFEEFKRILAAAGATGGSAPPLEDSWYSVPLSEIDFSRCRRCSPSYRALPRDYPPPPCSDRSDEEVKVLNDIWVSLPVGSEESYTFRHMRRNTYEEVLFRVEDERFEIDMVLDSNAATLQRLIPIAEEI--------AKLSQEEAVSVE-----AASKAPTEGAGMGGKRFQYSFDKNILGVIHRNSIARIYGDSGNEMLDLMVKNPTVAIPLVVERLRQKDKEWRNVRARLNVHWKDLAEQNYYKSLDHRSLTWRTIDKRTTSVRHMLSEIKDRSQNGGREGKEAIRQKIEKAKEEHGTFFEIT----------NADSVSQ-----DLDLTFLP-----------------------------------------KPERLLFTPHLSLKY--ENVSIVQRDAYRILAFALERGSTSPHDKERCHRLWNEFLGPWFGLSMTWMQSPAVAYQE----------ATPSTKTPDIPVVVSEEDEDESMDEDIDVAGRVVTEETQKNENLDGAKVKDHHPLPVGSPVSTLYGPGTIEEFRQSDNLYCVKLAFGGKGYLRPATVLCSILPVEKSEYTDQLRAEDRSRLMRP-------GDQLAIGTQGLFLFLRLHHILVRRLSIAYNLAYSVGTDPTMATLVEQ--------MPDTNPTNV-GRRR---YEAFLALVYTLLDGGVNGSEGGKYEDRVRSLLGHGAYELAALDKLISNIWKNLQSLAQDEVMWNLVQLY 1333
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: A0A484E430_BRELC (HDAC_interact domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E430_BRELC) HSP 1 Score: 390 bits (1001), Expect = 6.240e-108 Identity = 363/1294 (28.05%), Postives = 576/1294 (44.51%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGI-SDIERLEDEY-------QATERAARSDHGGGAALGH------------------------------------AGDGDRS--VMSVQSGDESDLEDRT--VEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRSNGGTGIDPDRYTSKTQYTSQSLTLNQRRRLGKGRQMWSRAEDYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDNDWTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSN-SQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKNDPISTASRPQSKEGIRA--LRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFA----LATSKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHESSRSSGDERKGDRQASSPIVTDEAVVIPVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQ----------KLLFTTTDFYLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIG-YRTLLGHLYDLLEEKITTERYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQATQSQGIS-------PVIYRNHAQELLCHSEKEVVRVQYHPGV--------------------------------PKAAGWLVKPELKMEFIGRMGTEAKQ 4327
L V DA+ YLD VK +F DQP+ Y++FL +M FK++ + P VI+ V+ LFRG +L+L FN FLP GY+I + IE + + Q+ + + G+ +GH +G ++ +S SG+ + T VEFDHAI+YVTTIK+RF++E TYK FL ILHTYQ+EQ+ I VL+Q++ LF D PDLLREFT+FLPD VQ QAKERL+RAA +A+ R + Q + ++ P P +R+ R G SS++ + + M D YG+ R ++ D D + T ++L ++ + + P + G +RA + + +F+ + +L S ++W EFLKCL+L+S E+L R+E+L L+ +LF H +L+DEF L+ G ++ P++ P + L+E + + TPSYR LP Y CS R+ +E V ND W SVP GSED + FK MR+N EE LFK EDERFE+DM+I+ A+ I+ LEP+ +EI+ L+ S + + D + + +DK T HL+ ++R+YG+ G ++++LLRK PA A+P++LKRL+QK+EEW ARE+ WKE+ +K++HKSLDH + +F+++DK+QT + ++ E K R +E D +RA K+ S S + ++ +A P AADIA+AL K + + +++P + +A Q P W H + S +HK+ LL++ + D + P F+ L Q A KA R+ D+ + H + G S I +A + P + +E A P P L Q L + Y +R++ +L RL A LC +A +R P A+ + S KE+ G Y+ L LY L++ + +YE+ R L+G+ Y L +DKLV +L+++ ++D+ +L + + E+ +S + V Y N + + + R+++ PGV P+ WL++PEL + ++G M + ++
Sbjct: 237 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLILGFNTFLPPGYRIRPDTSIEVIPSQMAGRGGGQQSMYSSVGAPQSNGSNMGHCPPPVTIPPPPYSPPELHKSTPLSCQPVAPPSQIKTSGKPKKTQQTLSTSSGNAAATRSSTNPVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQR----SIRQVLDQVSHLFRDHPDLLREFTFFLPDAVQEQAKERLNRAAEKAQLR--KDQMALKAKKYSSAVPSYQP-------------------DRLDDRGGDSPSSAAMKGERSMVNDEDAYMKYGKKGVSRSFK-------------DDDLHL-----TGKALERREKXXXXXXXXSQFNHKRIKRRP---YDGKERRAYL-----------------AISDVLLDKEEWHIFEKIKKILPSR---DNWREFLKCLELYSQEVLDREEMLSLIRNLFGRHT--DLVDEFDHLLCSHG-VQKTPKEIWPFIPLAETDLSQCRRATPSYRSLPASYPIPPCSQRSVLEKEVCNDLWVSVPTGSEDFS-FKSMRKNQYEEALFKCEDERFEIDMVIEANASTISILEPLAQEIDVLKENEKS----------------------NRDNDK---LWNYVVDKGTFRVTHLNAITRIYGEAGSQILELLRKYPAGAIPIILKRLKQKDEEWRRAREDLNRQWKEVNEKNYHKSLDHTSFYFKQKDKKQTGMKMMMLEAKKR-LEGDEKRAEEAKSGLSASPSTVSATFAVVSAKAPPK-----------------------------AADIANAL--KKEQLLGSAKPLAAADSKAPPTVSQTSLLPTWK--PHFVYKF---ASVKIHKEAFGLLSYAADKNLSVVDKEKLCKVWQTFFFPFFYLEEEWLVRKPQYATVTPEKAKT-------LRVGTDVSTEFGEGTVQH------FNRENGYLTISITISGCQAYLQP----------SAVTVQEAADFPPGLPELDSKQDAIKVQMNHKSLFYGNQHAYAFVRLYQILHNRLERAFDLCEKAKRNRNRRTINP-----AARALAHAHHSLSASTKEKTGDYQAFLSELYSLIDGSVDNFKYEDSCRSLMGSTSYFLFTMDKLVAQILKHMQHLASDETCQELIKAFTDEKRDESASVDLTSAEAKAVAYLNRTKTIF--EGEGAFRMEFKPGVLRKTPLETRGGSTPLGVPEPFKIWAPSPRVKAPEYTKWLIEPELAIMYLGSMDDDGEE 1368
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: A0A0P1AYW3_PLAHL (Paired amphipathic helix protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AYW3_PLAHL) HSP 1 Score: 388 bits (997), Expect = 2.050e-107 Identity = 379/1287 (29.45%), Postives = 584/1287 (45.38%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGI-SDIERLEDEYQATERAARSDHGGG------AALGHA-------------GDGDRSVMSVQS-----------------------GDESDLEDRT--VEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEAR----------LGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRSNGGTGIDP-DRYTSKTQYTSQSLTLNQRRRL--GKGRQMWSRAEDYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDNDWTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKND------PISTASRPQSKEGIRALRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALATSKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHESSRSSGDERKGDRQASSPIVTDEAVVIPVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDFYLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIG-YRTLLGHLYDLLEEKITTERYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQATQSQGISP-------VIYRNHAQELLCHSEKEVVRVQYHPGV--------------------------------PKAAGWLVKPELKMEFIGRM 4309
L V DA+ YLD VK +F DQP+ Y++FL +M FK++ + P VI+ V+ LFRG +L+L FN FLP GY+I + IE + + +S + GG LGH D +S S Q G + + + T VEFDHAI+YVTTIK+RF++E TYK FL ILHTYQ+EQ+ I VL+Q++ LF D PDLLREFT+FLPD VQ QAKERL+RAA +A+ R G + G + +RL H S SS++ + + D YG+ RG++ G S G ++ ++ SQ +RR GK R+ + D L + + +F+ + VL S ++W EFLKCL+L+S E+L R E+L L+ +LF H +L++EF L+ G ++ ++ P + L+E + + TPSYR LP Y CS R+A+E V NDTW SVP GSED + FK MR+N EE LFK EDERFE+DM+I+ A+ I+ LEP+ +EIEAL+++ GS N D L + + ++K T HL+ ++R+YG+ G ++++LLRK PA A+P++LKRL+QK+EEW ARE+ WKE+ +K++HKSLDH + +F+++DK+QT + ++QE K +K+E AV K A E ++S ASP++ +A + V + AADIA+AL + + P+S S+ S L Q + P ++++ S +HK+ LL++ + + D + + A P FF L +EE I L V + + E + + KG + +A + P + A D E + ++ L + L F Y +R++ +L RL A LC +A +R P A A S+ KE+ G Y+ + L+ L++ + +YE+ R L+G+ Y L +DKLV +L+ + + D V +L + + Q+ Q P + Y N + + + R+++ PGV P+ + WL++PEL +E++G M
Sbjct: 241 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLILGFNTFLPPGYRIRPDTSIEVIPSQMTGRGGVQQSMYPGGPQQANSTPLGHRPPPVTIPXXXXXXXDLHKSTPSRQQLAPSGQLKPGAKTKKQQQVPAPGGTNAVVRNSTNPVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQR----SIRQVLDQVSHLFRDHPDLLREFTFFLPDAVQEQAKERLNRAAEKAQQRKDQMALKARKYGSSSQGYQPERLDDHGADS-------------------------------PSSAAMKGGRTLSNDEDAYVKYGKKG--RGFKDEDGRLS--GKALERREKXXXXXXXXSQFNHKRTKRRPYDGKERRAYLAISDVLLDKEEWY---------------------------------------IFEKIKKVLPSR---DNWREFLKCLELYSQEVLDRHEMLSLIRNLFGRHT--DLVEEFDHLLCSHG-VQKTSKEIWPFIPLAETDLSQCRRATPSYRGLPASYPIPPCSHRSALEKEVCNDTWVSVPTGSEDFS-FKSMRKNQYEEALFKCEDERFEIDMVIEANASTISILEPLAQEIEALKSSNGS-----------------------NNADDKL--WNYVVEKGTFRVTHLNAITRIYGEAGSQILELLRKFPAGAIPIILKRLKQKDEEWRRAREDLNRQWKEVNEKNYHKSLDHTSFYFKQKDKKQTGMKMMMQEAK-KKLE------AVEKCA-ETAKTDSN--------ASPSTVSATSTIVDSKAPPQ-------------AADIANALKKEQNLGFAKPPVSADSKDGSTASQPTLLTQWK---PHFVYSF--------ASVQIHKEAYGLLSYAIDKSLGVTDKDKISKVWQAFFFP-FFHL--------KEEWLVRKPQHSILTYEKTKTLRVGTEVNTEFGEGTMQHFHQEKGYLTINMTASGCQAYLQPSAVTVQEAVDFPPGLPELDSMQDAAKVLTDRKSLFFGNQHAYAFVRLYQILHNRLERAYDLCEKAKRNRNRRTINPAARALAHAH------HSLTASKEKAGDYQAFVSKLFSLIDGSVDNTKYEDSCRSLMGSTSYFLFTMDKLVAQVLKQMQHLANDDVCQELIKAFVEIQSEQKSISDPADAEAKAIAYLNKTKTIF--EGEGAFRIEFKPGVLRKTPLETRGGATPSGASEPFKIWAPSPRVKAPEYSKWLIEPELAIEYLGSM 1360
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Match: A0A225WNY7_9STRA (Paired amphipathic helix protein Sin3 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WNY7_9STRA) HSP 1 Score: 388 bits (996), Expect = 2.830e-107 Identity = 375/1285 (29.18%), Postives = 571/1285 (44.44%), Query Frame = 2
Query: 761 LTVNDAMDYLDAVKLEFRDQPETYDEFLAIMGRFKSKQMLPPDVIVEVARLFRGRNSLVLRFNRFLPEGYKIGI-SDIERLEDEYQATERAARSDHGG-------GAALGH-----------------------------------AGDGDRSVMS-VQSGDESDLEDRT--VEFDHAINYVTTIKRRFSEEIGTYKAFLEILHTYQREQQDTQSGINHVLEQITDLFADEPDLLREFTYFLPDTVQAQAKERLDRAAVEAEARLGRAQNGQRLQRLPVHKPQSGPQRGQARGKPANSSRDQSHGNRMQQRAGPRESSSSYRNDNDMDQDWREQRTYGRSTAHRGYQGNYGSRS------NGGTGIDPDRYTSKTQYTSQSLTLNQRRRLGKGRQMWSRAEDYELGPDGVFKGPTKRAREPDDAGAAAQGRGWPPTDSQGATIKTSPANQLFDHARDVLSSSGDDNDWTEFLKCLDLFSNEILGRDELLELVHDLFEAHDGFELMDEFKDLVYRRGKLEPPPRDAMPTLGLSEINFQSAKMCTPSYRELPKDYQGTACSGRNAVEDAVLNDTWASVPVGSEDSNNFKHMRRNPNEEQLFKMEDERFELDMLIDCVAAAIARLEPVEEEIEALRATTGSALGQTLAASAETSGEGASTTAWSENGDVSLPRFQFRLDKRTLGPLHLSTVSRLYGDHGPEVVDLLRKNPAVAVPVVLKRLRQKEEEWCAAREEATSGWKELAQKHFHKSLDHRTHHFRREDKRQTSNRALLQEIKDRKVEEDPQRAAVVKAAREMVHSNSQKYVLLLGRASPTSTAADADSVSGQGSAGEVDTAALDGSGAGAADIADALPVKNDPISTASRPQSKEGIRALRQQAEQNPPWYMFAHLTLPYPTEGSTAVHKDIMELLTHTLARRPPSEDDVRQASTVVADLLPAFFALATSKQAANEEEGKAPDGNGGIAKARIAIDLPVLSSDDDSDHESSRSSGDERKGDRQASSPIVTDEAVVIPVSQGGTRAKDAGSASEEDAQGRPSSPPLPQGQKLLFTTTDF----------YLVLRMHHLLAERLAEAKKLCREAGLSRQTVVATPQEVLRASAGIGSTDVSSVVGDKEEIG-YRTLLGHLYDLLEEKITTERYEEGVRQLVGNQGYVLCNLDKLVVGLLQNLYRASADKVFNKLTQLYYYEQA-----TQSQGISP--VIYRNHAQELLCHSEKEVVRVQYHPGV--------------------------------PKAAGWLVKPELKMEFIGRM 4309
L V DA+ YLD VK +F DQP+ Y++FL +M FK++ + P VI+ V+ LFRG +L+L FN FLP GY+I + IE + + +S + G A +GH +G + + SG T VEFDHAI+YVTTIK+RF++E TYK FL ILHTYQ+EQ+ I VL+Q++ LF D PDLLREFT+FLPD VQ QAKERL+RAA +A+ R +DQ M Q+A R YG S ++G + + G S GG +D + K + + R GK + R ++ + R P D + R + + +F+ + VL S + W EFLKCL+L+S E+L R+E+L L+ +LF H +L++EF L+ G ++ P++ P + L+E + + TPSYR LP Y CS R+A+E V ND+W SVP GSED + FK MR+N EE LFK EDERFE+DM+I+ A+ I+ LEP+ +EIE L+ ++G W+ + +DK T HL+ ++R+YG+ G ++++LLRK PA A+PV+L+RL+QK+EEW ARE+ WKE+ +K++HKSLDH + +F+++DK+QTS + ++QE K +K+E D +RA E +NS ASP++ +A + VS + A+DIADAL K + +P I + + + P + + S +HK+ LL++ + D + + A P F EEE + A LPV + E + + KG + + +A + P + +E A P P L Q D+ Y LR++ +L RL A LC +A +R P A+ + S KE+ G Y+ + LY L++ + +YE+ R L+G+ Y L +DKLV +L+ + + D +LT+ + QA T G Y N + + + R++++PGV P+A+ WL++PEL +E++G M
Sbjct: 231 LRVEDALLYLDQVKQQFGDQPDIYNQFLDVMKDFKAQAIDTPGVILRVSTLFRGYPNLILGFNTFLPPGYRIRPDTSIEVIPSQMSGRGGVQQSMYPGVGAQQSSNANMGHRPPPVTIPPXXYSPPELHKPTPSSRQQLPGGQMKNSGKPKKQQPAPTPSGGNVAARSSTNPVEFDHAIHYVTTIKQRFADEPETYKEFLAILHTYQKEQR----SIRQVLDQVSHLFRDHPDLLREFTFFLPDAVQEQAKERLNRAAEKAQQR-----------------------------------KDQ-----MAQKA----------------------RKYGSSQGYQGDRHDRGGDSPSSAAMKGGRLMDDEDAYMKYGKKGRGYKDDDHRLSGKA--LERREKEXXXXXXRAQFNHKRNKRRPYDG---KERRAYLAISD---VLLDKEEWNIFEKIKKVLPSR---DSWREFLKCLELYSQEVLDRNEMLSLIRNLFGRHT--DLVEEFDHLLCSHG-VQKTPKEIWPFIPLAETDLSQCRRATPSYRGLPASYPIPPCSHRSALEKQVCNDSWVSVPTGSEDFS-FKSMRKNQYEEALFKCEDERFEIDMVIEANASTISILEPLAQEIEVLKKSSGD-----------------DDKMWN-----------YVVDKGTFRVTHLNAITRIYGEAGSQILELLRKFPAGAIPVILQRLKQKDEEWRRAREDLNRQWKEVNEKNYHKSLDHSSFYFKQKDKKQTSMKMMMQEAK-KKLEADEKRA-------EEAKTNSV--------ASPSTVSATSAVVSAKAPPQ-------------ASDIADAL--KKEQSVGLPKPSITAPIPSQPTTSTKWKPHFAYKF--------ASVQIHKEAFGLLSYAAEKNLSVADKEKISKVWQAFFFPFFH---------REEEWLVQKPQHTTVTLQKAKTLPVGTDVSTEFGEGTVQQFNREKGYFTINLATIGCQAYLQP----------SALTIQEAADFPPGLPALDSKQDAAKVQVDYKSRFYGNQHAYAFLRLYQVLHNRLERAFDLCEKAKRNRNRRTINP-----AARALAHAHHSLSASTKEKTGDYQAFVSKLYSLIDGSVDNSKYEDSCRSLMGSTSYFLFTMDKLVTLVLKQMQHLANDDTCQELTKAFAEVQAEPKPSTDLAGAETRATAYFNKTKSIF--EGEGAFRIEFNPGVLRKTPLEARGGSTPSGASEPFKIWAPSPRVKAPEASKWLIEPELAVEYLGSM 1341 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig669.16.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig669.16.2 >prot_P-littoralis_Contig669.16.2 ID=prot_P-littoralis_Contig669.16.2|Name=mRNA_P-littoralis_Contig669.16.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1315bp MIRTGNSGQSGVDPKTAETDRHNRGDTSEGRGVVRARKRREEINYQGREPback to top mRNA from alignment at P-littoralis_Contig669:46356..64681+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig669.16.2 ID=mRNA_P-littoralis_Contig669.16.2|Name=mRNA_P-littoralis_Contig669.16.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=18326bp|location=Sequence derived from alignment at P-littoralis_Contig669:46356..64681+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig669:46356..64681+ >mRNA_P-littoralis_Contig669.16.2 ID=mRNA_P-littoralis_Contig669.16.2|Name=mRNA_P-littoralis_Contig669.16.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3945bp|location=Sequence derived from alignment at P-littoralis_Contig669:46356..64681+ (Pylaiella littoralis U1_48)back to top |