prot_P-littoralis_Contig668.20.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig668.20.1
Unique Nameprot_P-littoralis_Contig668.20.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length100
Homology
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5KZC8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZC8_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 4.720e-56
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQ ADFLTK LPK+ FCAHRDFVMNIR
Sbjct:   79 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 177          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5L610_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L610_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 6.290e-56
Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW  IFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQ ADFLTK LPK+ FCAHRDFVMNIR
Sbjct:   33 MKEAIFLRYLWKIIFPGCDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 131          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 7.040e-52
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQ ADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  478 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 576          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5KHN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN8_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 7.220e-52
Identity = 83/99 (83.84%), Postives = 89/99 (89.90%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW  I+P  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQ ADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  317 MKEAIFLRYLWKLIYPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 415          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5KGK7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGK7_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 7.800e-51
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQ ADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  702 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 800          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5KAC2_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAC2_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 1.770e-50
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQ ADFLTK LPK+ FCAHRDFVMNIR
Sbjct: 1778 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1876          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5JN01_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN01_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 9.350e-50
Identity = 83/99 (83.84%), Postives = 91/99 (91.92%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            MKE IFLRYLW+FIF + DVGCTLVHEDNVGA++LASNPATTPNSKHIDI+H  IRERVARGEFR+VHVRS LQ ADFLTKAL K+AFCAHRDFVMN+R
Sbjct:  746 MKETIFLRYLWSFIFSNRDVGCTLVHEDNVGAIHLASNPATTPNSKHIDIRHQCIRERVARGEFRIVHVRSDLQRADFLTKALSKEAFCAHRDFVMNLR 844          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5K5L3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L3_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 1.230e-49
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            M EAIFLRYLW  IF  LDVGCT V EDNVGA++LASNPATTPNSKHIDI+HHFIRERVARGEF+VVHVRS LQ ADFLTK LPK+ FCAHRDFVMNIR
Sbjct:  465 MTEAIFLRYLWKIIFSVLDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 563          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE)

HSP 1 Score: 169 bits (427), Expect = 1.370e-49
Identity = 77/98 (78.57%), Postives = 90/98 (91.84%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNI 98
            MKEAIFLRYLW+FIFPD DVGCT++ EDNVGA++LA+NPATTPNSKHID++HHFIRERV RGEF+VV+V S LQHADFLTK LPK+AF  HR+FVMN+
Sbjct:  248 MKEAIFLRYLWSFIFPDGDVGCTVIKEDNVGALHLANNPATTPNSKHIDVRHHFIRERVDRGEFKVVYVPSHLQHADFLTKPLPKEAFSVHRNFVMNL 345          
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Match: A0A6H5JMP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP2_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 1.810e-48
Identity = 83/99 (83.84%), Postives = 88/99 (88.89%), Query Frame = 0
Query:    1 MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDIKHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR 99
            MKEAIFLRYLW FIFP  DVGCT V EDNVGA++LASNPATTPNSK IDI+HHFIRERVARG F+VVHVRS LQ ADFLTK LPK+ FCAHRDFVMNIR
Sbjct: 1006 MKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKQIDIRHHFIRERVARGGFKVVHVRSDLQRADFLTKPLPKETFCAHRDFVMNIR 1104          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig668.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZC8_9PHAE4.720e-5685.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L610_9PHAE6.290e-5684.85Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JWG1_9PHAE7.040e-5285.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KHN8_9PHAE7.220e-5283.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGK7_9PHAE7.800e-5185.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KAC2_9PHAE1.770e-5085.86Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JN01_9PHAE9.350e-5083.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K5L3_9PHAE1.230e-4983.84Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L5Q2_9PHAE1.370e-4978.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JMP2_9PHAE1.810e-4883.84Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF338GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 6..93
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..93
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..86
e-value: 2.8151E-30
score: 102.546

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig668contigP-littoralis_Contig668:92871..93170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig668.20.1mRNA_P-littoralis_Contig668.20.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig668 92822..93209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig668.20.1 ID=prot_P-littoralis_Contig668.20.1|Name=mRNA_P-littoralis_Contig668.20.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=100bp
MKEAIFLRYLWNFIFPDLDVGCTLVHEDNVGAVYLASNPATTPNSKHIDI
KHHFIRERVARGEFRVVHVRSALQHADFLTKALPKDAFCAHRDFVMNIR*
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