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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 408 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 219 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791384.8120818-UTR-P-littoralis_Contig665:58629..58673 | 1680791384.8120818-UTR-P-littoralis_Contig665:58629..58673 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig665 58630..58673 + |
| 1680791384.8518367-UTR-P-littoralis_Contig665:66478..66623 | 1680791384.8518367-UTR-P-littoralis_Contig665:66478..66623 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig665 66479..66623 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791384.8249815-CDS-P-littoralis_Contig665:58673..58778 | 1680791384.8249815-CDS-P-littoralis_Contig665:58673..58778 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig665 58674..58778 + |
| 1680791384.8397412-CDS-P-littoralis_Contig665:66364..66478 | 1680791384.8397412-CDS-P-littoralis_Contig665:66364..66478 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig665 66365..66478 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig665.8.1 >prot_P-littoralis_Contig665.8.1 ID=prot_P-littoralis_Contig665.8.1|Name=mRNA_P-littoralis_Contig665.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=73bp
MAQPSRPQRSVKPSQKAQEAGLVIPRSPPRVQTKKDHPPGRCAMQLQEGD
SSQRHGSALPKTALGGCRGCSE* back to topmRNA from alignment at P-littoralis_Contig665:58630..66623+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig665.8.1 ID=mRNA_P-littoralis_Contig665.8.1|Name=mRNA_P-littoralis_Contig665.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7994bp|location=Sequence derived from alignment at P-littoralis_Contig665:58630..66623+ (Pylaiella littoralis U1_48)
GCCTGGCTCATATTTTTGAGCGGGAACATAGCACAAGCACACCGATGGCG
CAGCCGTCTCGTCCTCAAAGGAGCGTGAAGCCGTCCCAGAAGGCGCAGGA
AGCTGGCCTAGTGATACCTCGGTCGCCACCGAGGGTTCAGACGAAAAAAG
TGGGTGAAGCGGCCTCTTTTCAGGAGATGGTCCGGATGAAACAGAGCTTG
ACCGAACAGCTGGGGGGGGAGGATGGTAGCAGCCTTACGCCTATCGACGC
AGATGCTAGCAGCGTCGAAGGGGACAACACGCCGGACGTGGAGATCGGCT
GTGTGCGTGTCTGTGCGTTGTCCCCGCTGTGTTCCGTATGCTGGTCATGC
TTGCGGGTGTTGGATGTGCACACCTTCAGCGTAGCTCTCCTTCTCTCTCT
CTCTCTCCCTTCACTCTCTCTGTGCAGTCGTGAAAACTGAGCGCAGCACA
CTCTACTGCTGTGCGGTTCAATTGTTTTGCATGTTTTTTTTTATGATAAC
CACTTTTTCGAGATCTCTCTCTCTCATGTCTCTCTCTCTCTCTTCTCTCA
CACACACACGTCCTCACCTGGCAGCTACAGCAGCACTGCTGCAGACCTCC
AAGATATGTGTATATGCTTGTGCTCTGTGTCTATATGTTGAGTGTGTTAT
GCTCCTATAAGGCTTCCAAACCCGGACCTCGACAGCGCTGGTAACTTGTT
ATACAGCGACAAGCTCCACACAGTGTAGCGTGACTAGTAGTGGATGATAG
GTATAGGATATGTTGCCGCCAAAAGGATCCGACCGGAGTAGACTATAGAT
ATACTGCTCGACTTTGATTTAAGTACTTACTGCTGTAGTGCGAGAGTAGG
CCGAGGTTCGGGGCCAGGCACCTACGGTTTCCACACAGGTAGTGTTCGTA
AGAATGTTGGTGGGGTCAACATGTTGCGCGTTGTTTAACAGAATTGGGAT
ATTTGGTTGTCCGCATCGGTGTCTACAGCAGCAGCACTCGACCTGACCGC
TGCTGTGTCTTGCAATATATTTTTGTCACCCCGTTCCTGATTTTGCTGTA
GGTCCGTCCCGCACTGTTTTTGCGTGCGATCCTCTCCTTCAATCGTAGCC
GTGCCATGATAACACAGCCGCGTGACTGAAACAAAAGCGCCGCCTTGCGT
CGTGCAGAGAGGGGGCACGCTACTACGTTGCCCATCCCCACATCGTGGAA
AATCCAATAATCGTAGACGTGGTTAAGAAACGCGGCGAGTCTCTTGGGAA
ACGCGGCGAAACTCTACGCCAATCTCAGCGTCCCTGCTGAACACGTCATT
TTAGTCTCGCCGCCTCAAAAAATCTGAGCAAAATCTCTTTTTTTTGTATC
AAGCAAAAATCCGGGCAAAAAATCCGAGCAAAATTCCGAGCAAACTTCCG
AGCCATTTCGGGGGGCCGAAATGGAAACCACCGAAACTGTCTAATCAAGT
GCACCGCGGAGTTTCTTAGGAAACTTGATTGGAAAAGAACAATAAGAAAG
AGCTGTAATGTGAGAGAGCGGCGGTGATGGAGGTGACCTAAGGCAACGCC
GGCAGTGAAGAAGCGTTACGAGAGCATGGTGCTGGTGAGATGTGGCCTTG
GGCAACGCCAACAGCAACGTGGACCCAGACAAGGAGGATGTGTTCAGGGC
GACATAATCACCAGCGTCGCAAGGACGGCATGGAGACACCATCCTCGACA
ACATCTATCTGATGATATGATACGTGGTGTCTGTTTTTCCTTCTTCTGTC
TTCTCCGATTGCCGGGGCTACTTGCGCGTTGCAGGTAGCACTCCAGGCAG
CAACTAACTGCTGTAGTCTGCAGCTACCTACTGACTGCTTGTAGCAGCAG
TGGTTATTAGTTATAAGTCGGGCGGGAGGAGACTGAACACGATGTTGTAG
TCAAATGAACGACTCTGGAAGTACGTCGTTTGCTGTTGGTACTGCTGTGA
CTGCTGTAGTTCAGTGATGCACACCGCGTAGGAAGGTGTATCTTCTTCGG
TCTTTCTTGGGTATTTCCTTGTACTTCGAAGTGGTTTCTTTCTGTTTTTT
TTATCTTCCTAGGGCTCAGCACTTTTTGTGACCACGGGCTAGATTTTGGC
GATGAGCTAAATGTGAGAATCAAACAACAACAACAACTCACACATGGATC
TAGAGAAGGGTTCCCAGGAACCTGGAACGATCCATAAGAAGATCCAGAAC
CATACAGTATACGATATTCACGGTTGGTTCTAGATCTGGTTCAGTGGGCT
CTAGAGAATATAGTCAGTACAGTCCAGAGGAAATCTCACAGCAATGGTAC
TGTACAGGAGGAGCGCCCTTACCGGTCTCACTCCCAGCTACCATCTGTCT
CTGCACAGTCACAGTTCACGTGCGTATCTCTGCACGGTCACTCCGCGTGA
CACGCGCAACAAGTTAGGCTTGTTTTTACTGGTGCCCGATAACAACAGCG
TGCTCGATACAGTTTACTCACCAAGCGTACTTTCTAGACCTACCACCAGA
AGTTTCACTCAACTTTCACTCAACGCCAAGTCTCTAGACTTTCTTATACG
GAGTATTTCAATATAAACAATTTGACCAGTTGCTTGAAATCTCGCAACGA
GCAAGTCCTCGCAGCAGGAACACCGCACAATCCAACAACACCACCGACAA
CCACACAGCCGGTAAAACCACAACCCAACAGTGTCTTCCTTCGTTCGAGA
GTAATCAACAAAAAACCAAACTGGTGTGGCGGCAAAAAAAACTGCTGTTT
TTGTTGTCGGTTGAAGAGTTCAGAGGACAGCAGCAGCAGCAGCAGCTAGC
TGCCAGCTCTCGGCCGATCCATTTTGGTTTTTGGTCTTTCGCTCTCGAAC
GAAAGAACCCCCACCAATACTAAAGCCATCGGCCGTGAGGTGTATGTACG
GTCCTTCTCCTCTCAGCTGTGGAGATGACGACAGCAAACAGCAACAAAGG
TGTAAAAAGGTGTGTCATTTATTATTCTAATAAATACTCCAATCCTTGGG
TACTAGGAAGTAATAAATACCTGATTTTTAGATGTGGCAAGATGATCTGG
GCCAGACGATGGCGATAGTATAGAAGGTCGTATACACACCACGTAGTGTT
ACAGCTGGGTAACTCCTCAAGACCTATCGGAGATGAATCGTAGCACCGCG
GCAAGGTCCCAAAGGCCGGCTATTCCGCAAGCTCAGGGAGGAGATTACCC
ACAGGTAGGTAAGAAAATGACTGCGTGTGTGTGCACATTCCTCCACGCTA
CCCATCTATACTAAAAAGTTCTTATATTGTCCTCTCATGAGCGACAAGAT
TTACATCTTTCTCACACAGAGTTCCGTTGCCACAAGCCGCGGTGTTGTTG
TTACCCTCGTCGTTGCGCACGCACACCCGCTGTGAAAGTCCGTAGCAAAC
CCCCACCTTCCTTTATTTTATTTTTTAATATTTTTGTATGTGAATTAGGG
TTGAGACGGCTGTATGTACTGACATCACAACCAACCATGGGAGGCACACA
CAACAAGATAGGAAGAACCGAATCCTCTCGGACCATTAGGATTGATCGTG
GTCCGTTGACCACCTGAAGATCCGATGGATGTCTGGTTCCTCCTGTTGGT
AAGCAACAGGCCGAACCTCTGGTCACCCCGTTGCCACTCTACCTTTTGGA
CCCTCCTTGCTAAATGCACGGAAGAAAACTTTGACCCTGCCTTTCTTTTG
TGACCAAAAGACCGTCGTCGTGGGCTTACACGACCACACCTTGGGACCAA
CTACGGCTGCGCCCACTCACGGTAGCCTAGGTTCACAGTGGCGTCGACGA
TTTAACGAACATCAGTTCTCCTGTAGACAAGGCGAGGGGAGAAAATGGTA
AAGAATCGTTCGGCGGGTCAACAGAAGGCCCAGCGTCTGAAAGAAGAAAA
ATGACTAAACAACCGTCTCGAACAGGAGCTCTCGGCGGCGCGTGCTGCTC
TCGCATCGGCGAAAGGGGCGCCAAAAGGTACCCCCGCCGCGCGGACGCCA
GCGTCGCGGAGGTTTCACAATAAGCATTTATTATTCCTCAATATAATATG
AGATATATATGTTATGCGAGAAAAACATACGGAGTATATTAGTATAAAGT
AGTATTAATATCGTTGATAACTAACTATTATCTATTATACGCATAAAGAA
ATGTCCCATATCGCAGCATTCCGATCGCTGAGAGGGTTAGCATTATGAAA
TCTCCCATATCGCAGCATTCCGATCGCTGAGAGGCCACCATTCCATTTTC
ACTTGAAATTAGACTTAGGCGGGACCACGCGGCACTGCACAGTTGGCCAC
TTTGCTCCCGAAAAAAATCATCTACAGCATTTATTTACACGTGAAGTGGA
AACTAGGTCACACTCACTTTGTTACACGATGATAGGTTCGCAGCCAGTAG
TGCTCACCCAGGTGCACTGCAGTCCCTGATGGACGATGACATTGCTCCTT
GCTTGATTGTTGAAGGAAGGGGGAAGGGAGGGACTAAGGGGGAGAGGTGT
GCAGGCGTAGCCGGACGAAAAAATACGTGCTATTAGAATAGGGCGGAACG
GTGCGGAACGCCTAGATTGGACTGAATCGACGCTTCATCATTTCCTCAAG
AAGGCCACGTTATTAGGTTCGAATCCGTCGAAGACCTTCGTTTTTTTCAC
GTTTCTCTTTCACACTGCAATTTTTTTCTCTTGGTTCGTAGGGATTATTA
AGGAATGGATTTTTCTGCTTTTTGGGCGTTTTTGGCTTACTGCTTTTCGC
CGCCGTGTGTGTTGGTCAAAGCACCATTTTTACTGCTGCCATGTACTTCG
CAGCAGTTTTCTTCGGATTCTCAGCACTCGTGAATAAAGGGACTAATCTG
GCCATCATGCGAACAGTTTGTTCACGCAAAAAAATAGAACGAAAATGTCA
TGCTTTGAAGTGTTATCTTATTTTGAGTACGACGGCAGCAGCACAAGAGA
GTATCACCACCGTGATGCCGCCGTGATGCACGACAAGAAGGGAAGGAACA
ACACGATCGAACACACAATGCATTGGCTACACCTGAGCTCTACATGAAAG
CGTAGAATATAAATGCAACATAAATAAGCGCAATGTCATTACTTCAAAAC
CCTTCATCGAGCACTGGGAATTTGTTTGTTCTAAATGCACATCGCGCGCG
GAAACACGCGCGCGGAAACACGATCATGTATCACGCTTCCTTCGATTACC
ATTCCACTCCGCTTATTCAAACATCCGCACAAATTCGGATGCTCAGCAAT
ATGCAACGTCTACTGAAGCGCCGTTTAATCCAGTCGTTCGATCTCAGCGA
CCGTCATCGGCAAAACGTCTCCCGGCCCCGTTTTCCCCGCTGCGGAAGGC
GACACTGCAACACGACCGGCCACAGCACGATCGCCTACAGAAGAACCCCT
CCTTGTACCATCCCCTGCACCCTCCTTCCACCCTTCCCTGCACCCTCCCT
TGCACCATCCTTGCACCCCTCCCCCTCCCTGCCTCCCCCCCTGCACTCTC
CTTGCACCCTCCTTCCACCCCTTCCTGCACCCCTCCCTCCCTTCCTGCAC
CCCTTCCTGCACCATCCTTGCACGCCCCCCCCATCCCTGCTTCCTCCCCT
GCACCCTGCTTGCACCCTCCTTGCACCCTCCCCTGCACTCTCCTCGCACC
CCTCCCGCTCCCTGCCTCCTCCCCTGCACCCTCCTTGCACCCTTCTTCCA
CCCCTTCCTGGTCCCCTTCCTGCACCATCCTTGCACGCCTCCCTCTCCCT
GCCTCCTCCCCTGCACCCTGCTTGCACCCTCCTTGCACCTTCCCCTGCAC
TCTCCTCGCACCCTTCCCGCTCCCTGCCTCCTCCCCTGCACCCTCCTTGC
ACCCTCCTTCCACCCCTTCCTGCACCCCTTCCTGCAACATCCTTGCACGC
CTCCCGCTCCCTGCCTCCTCCCCTGTACCCTCCCCTGCACCCTCCTTGCA
CCCTCCTTGCACCCCTCCCTGTACCCCTCCCTGTACCCCTCCCTGTACCC
CTGCAGAGGAGGGGGTACAGGGAGGGGTACAGGGAGGCGCCGGGGAGGGC
GCCAATCAGATAGCCGGACGGAAAAAAGTTCTATAGGGATAGCAGGGCGA
TCCATGCTGAAGCCTAGATAACATTTTTTTCAGCAATATTTTCTCATGCA
AACGCGGCGCAATACCGCTTTGGAGCGCCTGCTCGCTTTTGGATGGGGGT
AGGACCCTATTAAACAAGACTTTCTGGGTAGGTCCACACCTTCACGGAAA
CCCCACAGTCCCGCAATTCTCTGTCAGCGCTGGAGCGCGGCACAACTCGC
CACACGCCGCTTATTCTTCTGTCGGGAAGGGCACCTACGTCTCGGCACCC
ACGGCCCAAGGTGTGAGTGCACGATGGCAGGAATGGAGGGGGTGTCGTCT
GCGCTCGTTTGCAGTGTTGGTGCTGGTAGTGGTGCAGGTTCTTCTGCTGC
CTCCGCCACATCTGGCATTACTGCTACTGCTGCTGCTACGGCTGCTGCTG
TTTCTGTCGAATCAGGTACTACTGCGTCAACGGCTGCTGTTGCTTCTGTT
GCTTCTGCTGCTGTACTCGCACTGCTGCTGTACTGCTGTGCTGCTGATCC
GACGAGGGTCTTGACGGGCGAGTTGACAGTCGGCTGGATGCTGGATGTTG
TTGTTTCCATTGCTGTGATATTACTGTTGATGTTGCTGATGCTGATGCTG
TGTTCTTGCGTTCGTTTGATCGAGTAAAACTCACCCCGTACGTCTTCCTC
CTTCACATGCTGCACAGGTGTTCACGAGTGAGTTGACATTCGACTGGTTG
TTGTTTCCACGTTGATTGCATTGTTGTTGCTGTTGCCGCTGTGCTGGTGC
TGTAGTGTTTGATGTTGAGTAAAACTGGCCCCATACTTCTGGCTTTGCAT
TCAGCCAGCTCGAGAAGAAGCTGGAGTCGCAGTCACACTGGGTAGGCCCG
AAACGGTCGGATAGGGAGCCGGTAAACAGGTTCAATTTGTTAGCGTGACA
TCACATGTCAGGCGGGGCATCATCAAGTCGTACCTTATGTTGGGGAGGGC
GTGGTCTGGGATGAGGGCGAAAGAGATCTGGATCAACATCGCATAGCCTG
GGAGGTAACCATCATAATGGATATTTGGTGCAAGGTGCAGTTTGCCCGTG
TATGGGTGTTGTGTGGTGAGGTATGGGCGCTGGGCCGTGTGATATTGTGT
GGGCTCTGGGCCGTGGCACTGGGCCGTATACTTGAGAAAGGCCCTAGGCC
TGGAGTCTGGAGGCCCTGGGCCTGTAGTTTGGGAAGGCGCTGGGCCGAAC
TTGATAGATTGATCAGAAGCACAGAGGCAACACGGTCGCTCGGGTGGCGC
ACTCAAAGCTTCAAGAAGAAGCGATCTACGACATCATACGAAACACGTAA
CCCACCGCATCGATCCACGATGTTCCCGAACAATGATCTCCGTAGAACTG
CAACAAATAACCAAACGATCGCATGCTGCTACGAGTACATCTAACACATC
ACATGGCTAGCGGGATCGCTCTTAACGGAACCCTGTTGCAGTTCCCTGTG
CAAAATGTGTCTCTTATCTGCAACCTCCAACGCCGGTTTGGGCCCCGCAA
TCTTGCACTTTGCCCTTTACGTTGCGGGTGCGAGGCACTGTTTTTCGAAG
TTGACGTGATTACTTTTCCTCACTAGTCGTCCCCTATGATATTCTCCGTC
GTCATGCCCTCCTTCCTTCGAACCCACGtTTTCAGGATCATCCTCCCGGC
CGCTGCGCCATGCAGCTGCAGGAAGGGGACTCATCGCAGCGTCATGGCAG
CGCTTTACCCAAGACGGCGTTGGGGGGATGCAGGGGATGCAGTGAATGAA
GAGTGCGCAACACACATCCAGCCTCCGCACCCGTCCTCGCTTTTAACAAC
ACACGCACATACACACGTGTGGTGGAATTTATTTGTGGTGCATGTGTGCG
GGGATGGGCGCAGGGAGTTGGCAGGGAAAGGTGCAGGGAGGGTG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig665:58630..66623+ >mRNA_P-littoralis_Contig665.8.1 ID=mRNA_P-littoralis_Contig665.8.1|Name=mRNA_P-littoralis_Contig665.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=219bp|location=Sequence derived from alignment at P-littoralis_Contig665:58630..66623+ (Pylaiella littoralis U1_48)
ATGGCGCAGCCGTCTCGTCCTCAAAGGAGCGTGAAGCCGTCCCAGAAGGC
GCAGGAAGCTGGCCTAGTGATACCTCGGTCGCCACCGAGGGTTCAGACGA
AAAAAGATCATCCTCCCGGCCGCTGCGCCATGCAGCTGCAGGAAGGGGAC
TCATCGCAGCGTCATGGCAGCGCTTTACCCAAGACGGCGTTGGGGGGATG
CAGGGGATGCAGTGAATGA back to top
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