prot_P-littoralis_Contig664.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig664.4.1
Unique Nameprot_P-littoralis_Contig664.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length122
Homology
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BLAST of mRNA_P-littoralis_Contig664.4.1 vs. uniprot
Match: A0A6H5K9K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9K2_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 1.400e-41
Identity = 84/121 (69.42%), Postives = 96/121 (79.34%), Query Frame = 0 
Query:    1 GNGRVDVVGSGSVGEISNVRVSQDSSAGGESLEWTDALPLEDAEVSKLLQELALGGGEDDASLGDFDEDFLGRPIDLEEVFSSSPKSNLAGAHGSTRKELSFGHSDVAGETADSAVGETKG 121
            GNG V+V G G  G+ISNV V++ S+ GGE LEW DA+PLE+A +SKLLQELA+  GEDDASLGDFDE+FL R ID +EVF SSPKSNLA A G TR ELSF  SDVAGETA S +GETKG
Sbjct:  370 GNGPVNVAGDGGDGKISNVWVNRVSATGGEGLEWIDAVPLEEAVMSKLLQELAVEDGEDDASLGDFDEEFLARSIDFDEVFPSSPKSNLADAQGPTRVELSFDQSDVAGETAASGMGETKG 490
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig664.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K9K2_9PHAE1.400e-4169.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig664contigP-littoralis_Contig664:10344..10709 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig664.4.1mRNA_P-littoralis_Contig664.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig664 10344..10709 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig664.4.1 ID=prot_P-littoralis_Contig664.4.1|Name=mRNA_P-littoralis_Contig664.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=122bp
GNGRVDVVGSGSVGEISNVRVSQDSSAGGESLEWTDALPLEDAEVSKLLQ
ELALGGGEDDASLGDFDEDFLGRPIDLEEVFSSSPKSNLAGAHGSTRKEL
SFGHSDVAGETADSAVGETKG*
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