mRNA_P-littoralis_Contig662.1.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig662.1.2 vs. uniprot
Match: D8LKD1_ECTSI (Aardvark n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD1_ECTSI) HSP 1 Score: 437 bits (1125), Expect = 7.890e-127 Identity = 659/1096 (60.13%), Postives = 744/1096 (67.88%), Query Frame = 1
Query: 1 MFGRKRSSKASR-SNKGNAKAKKAVKRLLDKPGPERMADIANLAALENVQPLNGSGLGQAGACNAVALVMGAFLEHRTIQTEACRAVEALADGSEENVRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLFNGEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANNCKNNRIKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMWLTSKNRQRAARHSSRSISSRKNRRLQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGDGGDGQ------DTHTESEDD---------YGXGYDSATSF--DDEDDVPEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGNNSKKVCMMAQPTQPNPTXXXNPTPQVPPSASPLPPARTTALVIPPASAAA----IGVVPTPPNNRPRSKAEQPIGELLQDFDSDGDGTYGPGPGQLLPTVAE-------------SEPMAGGGRVAIGPSPPKVQVCVKRGGTSHGSRHRRGEGSSSTKTSRDASRGGGRGSTGGTAAGGDPATSNXXXXXXXXXXXXXXXRGNTASXXXXXDGDHGRSRGNGVAP-TKEMMGEREGEGHERQGSRGSRSSNKSGVSRRGSTTDTSLLSAGAVPLPSDFLSSDPSRAHGSERSSR-YGSG---RYRRLSAAELLIDPAMASAPGVAELIERDEAVAHTLQTITGRDPVWFPSMLANVERLVQRSREMEAVTMSVRSRRMCSSDPLLGDSFSRCEYFDVLYRGLCGAHIAAAVVARGGIVADSKDGWLRKASALVRLISVACPSTKPGVELLGRALRLADRSKMADYLEQVAKSSKHPRDVSQLMDRTALRLL-EEGRAETDEGWLNTMKALENPTDEWLPAWLLEEAAVEGEQDDGGVFVEGYRTAGPLGTEVARRAAMVDGCTIIK 3165
MFGRKR +KASR ++KGNAKAKKAVKRLL+KPGPERMA +ANLAA EN+ P NGS LG+A ACNAVA VM F EHR +Q EACRAVEALADG+EENV+LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLF+GE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ANN K+NRI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L WL+SKNR S + ++ ++RR QA G GG Q D+ ++EDD X YDSATS+ DD XXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX +G KK+ M + S++ L T V P + +G+ P PP NRP S+AEQP+G LL+DFDSDG+G YGP + +E +GGG+ A+GPSPP+ Q XXXXXXXXXXXXXXX XXXXX D + VAP T+ M +R GH ++GSRGS+SS +G SR+ S TD SL SAGAV +PS+F PS+ S RS R +GSG RR+SA E+L+ PAMA A V+ L+ +DEAVA+TLQTITG++PVWFP M+ NVERLVQRS EME+V ++ S D D+ +R EYFDVLYRGLCGAHIAAAVVARGGIVA+SKDGWLRKASALVR++ +ACPS KPGVELLG+AL+LA+R KMAD++E VAKSS+ PR VS L ++TALRL+ EEGRAE DE L M+ LE+PTDEWLP WLLEEAAVEG+Q DGGV V G R G GTE ARRAA+VDGCT+IK
Sbjct: 1 MFGRKRGAKASRGASKGNAKAKKAVKRLLEKPGPERMAVLANLAAAENLHPFNGSALGEADACNAVATVMSMFPEHRQVQVEACRAVEALADGTEENVQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTNLFSGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANNSKSNRIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGEQALEWLSSKNRV-GTTLSMKKLTGPESRRQQARVRARTSSSFGGSSFGAGDNTRGNR-------------------GRGGRDQERKGSFDSVDDTEDDDXXXXXXXXXXXXYDSATSYGGDDXXXXXXXXXXXXXXXXXXXXXXXXXGPLEXXXXXXXXXXXXXXWDDDGMSVVSSVVSTGKAGKKMMMTGATVLGSDGNGEEEEAHSRQSSAELTKVVTPVAVTAPIPSTVPLGIVGLAPVPPPNRPLSRAEQPMGALLEDFDSDGEGNYGPXXXEXXXXXXXXXXXXXXXXXXXXNEQASGGGKDAVGPSPPRAQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDVQQ---VAPPTRSAMAQRGSSGHRKEGSRGSQSSRSAGGSRKSSMTDMSLRSAGAVSVPSEF----PSKQKFSSRSERSFGSGLSSARRRMSAEEVLMTPAMAMASAVSGLVRKDEAVAYTLQTITGKNPVWFPGMVTNVERLVQRSIEMESVMVAALSELRRFKDSPYDDTLARGEYFDVLYRGLCGAHIAAAVVARGGIVAESKDGWLRKASALVRIVCLACPSIKPGVELLGKALQLAERDKMADHVEHVAKSSRSPRHVSSLAEQTALRLVFEEGRAEADEKSLEAMRRLEHPTDEWLPVWLLEEAAVEGDQGDGGVVVAGLRARGAPGTETARRAAVVDGCTMIK 1069 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig662.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig662.1.2 >prot_P-littoralis_Contig662.1.2 ID=prot_P-littoralis_Contig662.1.2|Name=mRNA_P-littoralis_Contig662.1.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1647bp MFGRKRSSKASRSNKGNAKAKKAVKRLLDKPGPERMADIANLAALENVQPback to top mRNA from alignment at P-littoralis_Contig662:14760..47804+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig662.1.2 ID=mRNA_P-littoralis_Contig662.1.2|Name=mRNA_P-littoralis_Contig662.1.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=33045bp|location=Sequence derived from alignment at P-littoralis_Contig662:14760..47804+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig662:14760..47804+ >mRNA_P-littoralis_Contig662.1.2 ID=mRNA_P-littoralis_Contig662.1.2|Name=mRNA_P-littoralis_Contig662.1.2|organism=Pylaiella littoralis U1_48|type=CDS|length=4941bp|location=Sequence derived from alignment at P-littoralis_Contig662:14760..47804+ (Pylaiella littoralis U1_48)back to top |