mRNA_P-littoralis_Contig66.46.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig66.46.3
Unique NamemRNA_P-littoralis_Contig66.46.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A6H5JHK6_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHK6_9PHAE)

HSP 1 Score: 484 bits (1246), Expect = 4.900e-164
Identity = 252/344 (73.26%), Postives = 284/344 (82.56%), Query Frame = 2 
Query:  329 IAWLAALGAACAVVGPILLSPYAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYEDYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMPEYIRDRTGNNRVKDDGKSNIDGDGGDDGVNIARGAAAFWRAG 1360
            + WLA +GA  AV GP+LLSPYA++ VGEGSVGVLRFGGK+LD+ KAPG+HFV+PF +E+ E PVNVRTTE+RQV CGTSGGVL++FPLVEIIHRLHPASVVSTL+AYEDYE+ WII RV HDV  LCAR+SLHE+HIDKFDQLDDML     ETAS WVPGLMI+AARVAKPTIP QL GDFVRVEEEISKLK+AHQHEQLVVRNAEMERS+QVMAAE +RDI  MTM          L I RIQDEMH+TRSKDHADA SYSKLREAEGNERRLSPAFLE  R K+LYQNLEA+YG+RMPEY++  + +NR+  DG     G+GG  G   ARGAAAFW  G
Sbjct:   29 LVWLAVIGAISAVAGPVLLSPYAIKSVGEGSVGVLRFGGKVLDEIKAPGYHFVLPFLYELIEVPVNVRTTEVRQVPCGTSGGVLVYFPLVEIIHRLHPASVVSTLKAYEDYEQAWIIDRVRHDVKLLCARHSLHEVHIDKFDQLDDML-----ETASAWVPGLMIVAARVAKPTIPSQLHGDFVRVEEEISKLKVAHQHEQLVVRNAEMERSRQVMAAENDRDIARMTMXXXXXXXXXXLRIHRIQDEMHLTRSKDHADAASYSKLREAEGNERRLSPAFLEQARQKALYQNLEAYYGNRMPEYVKVNSNSNRL--DG-----GEGGSVGSEAARGAAAFWGRG 360
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A6H5KML6_9PHAE (PHB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KML6_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 7.000e-61
Identity = 110/292 (37.67%), Postives = 180/292 (61.64%), Query Frame = 2 
Query:  362 AVVGPILLSPYAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMP 1234
            AV+  + + P  +  V EG VGV   GG ++     PGFH  +P    + E  V V+T  ++ + CGTSGGV++ F  VE+++RL    V+ T+R Y  +Y+ TWI  ++ H++N+ C++++LHE++I  FD LD+ L A+L+    VW PG+ II+ RV KP IP Q++ +F ++E E +KL IA + +++V + AE ER K  + A+   D+  + M +E+ EK     I  I+DE+H+ R K +ADA  Y+ ++EAE N+R L+  FLE  R  S+    + ++G+++P
Sbjct:   14 AVLIYVCVLPLGLHKVREGHVGVYYRGGALMRAVAEPGFHTKIPLLTSMAEIQVTVQTDAVKDIPCGTSGGVMVDFEKVEVVNRLRKTHVLDTIRNYTVNYDTTWIFDKIHHEINQFCSKHTLHEVYISLFDTLDEHLAAALQLDCDVWAPGIEIISVRVTKPRIPTQIRQNFEKMEAEKTKLLIAMETQRVVEKEAETERKKSTIEAQMLSDVSRINMDKELAEKDVRRRISSIEDEIHLGREKAYADAVYYAHIKEAESNDRLLTDNFLEYSRILSMGNTSKVYFGEKLP 305
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A7M7NES8_STRPU (PHB domain-containing protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7NES8_STRPU)

HSP 1 Score: 216 bits (551), Expect = 9.070e-61
Identity = 108/282 (38.30%), Postives = 183/282 (64.89%), Query Frame = 2 
Query:  392 YAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMP 1234
            +A+  + EG VGV   GG +L  T  PGFH +VPF          ++T E++ V CGTSGGV+I+F  +E++++L  + V  T++ Y  DY+KT I  +V H++N+ C+ ++L E++I+ FDQ+D+ L  +L+E  +V  PGL I A RV KP IP+ ++ ++  +E E +KL IA QH+++V + AE +R + V+ AEK   + G+T A+++ EK +E  I  I+DE H+ + K  ADA  YS ++E + N+ +L+P +LE+ ++++L  N + ++G+ +P
Sbjct:   21 FAIHRIDEGHVGVYYRGGALLQTTSGPGFHVMVPFLTSYRSVQTTLQTDEVKNVPCGTSGGVMIYFDRIEVVNQLRQSVVFETVKNYTADYDKTLIFNKVHHELNQFCSAHNLQEVYIELFDQIDENLKKALQEDLTVMSPGLTIQAVRVTKPKIPESIRKNYELMENEKTKLLIAAQHQKVVEKEAETDRKRAVIEAEKIAQVAGITFAQKIMEKESEQKISIIEDETHLAKQKARADAQLYSSVQETKANQEKLTPQYLEMLKYQALTANTKIYFGNDIP 302
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A224XN48_9HEMI (Putative prohibitin-related membrane protease subunit n=6 Tax=Triatominae TaxID=70999 RepID=A0A224XN48_9HEMI)

HSP 1 Score: 214 bits (545), Expect = 4.460e-60
Identity = 111/294 (37.76%), Postives = 184/294 (62.59%), Query Frame = 2 
Query:  365 VVGPILLSPYAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMPEYI 1243
            VV  IL++ +++  V EG V V   GG +L +T  PGFH +VP         V ++T E++ V CGTSGGV+I+F  +E+++ LHP SV   ++ Y  DY+KT I  +V H++N+ C+ ++LHE++ID FDQ+D+ L  +L+   +   PGL I A RV KP IP+ ++ ++  +E E +KL IAH+H+++V ++AE ER K ++ AEK   +  +   +++ EK +   +  I+D +H+ R K H DA  Y   R+AE N+  L+P +LE++R +++  N + +YG  +P + 
Sbjct:   13 VVVAILMN-FSIHKVEEGHVAVYYRGGALLSQTSNPGFHMMVPLITSYRTVQVTLQTDEVKNVPCGTSGGVMIYFDRIEVVNHLHPNSVFDIVKNYTADYDKTLIFNKVHHELNQFCSVHNLHEVYIDLFDQIDENLKNALQRDLNEMAPGLKIQAVRVTKPKIPETIRKNYELMENEKTKLLIAHEHQKVVAKDAETERKKALIEAEKVAQVSRIQYDQKIMEKESLQRMSEIEDLIHLARQKSHTDAEFYQIQRQAEANKLLLTPEYLEMKRTEAIANNAKVYYGPNIPNFF 305
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A8J9Y3A5_BRAAE (Hypothetical protein n=1 Tax=Brassicogethes aeneus TaxID=1431903 RepID=A0A8J9Y3A5_BRAAE)

HSP 1 Score: 213 bits (542), Expect = 7.830e-60
Identity = 113/311 (36.33%), Postives = 195/311 (62.70%), Query Frame = 2 
Query:  347 LGAACAVVGPILLSPYAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMPE-YIRDRTGNNRVK 1273
            +G+ C  +  +L+  Y++  + EG VGV   GG +L  T  PG+H +VP         V ++T E++ V CGTSGGV+I+F  +E+++ L+  S++  +R Y  DY+KT I  +V H++N+ C+ ++LHE++ID FDQ+D+ L  +L+       PGL I A RV KP IP+ ++ ++  +E E +KL IA QH+++V ++AE ER + ++ AEK   +  +  ++++ EK +   I +I+DEMH+ + K  ADA  Y   ++AE N+   +P FLEL++++SL  N + ++G+ +P+ +I  + GN  +K
Sbjct:   10 IGSVCITI--VLIFNYSLHRIEEGHVGVYYRGGALLPTTSLPGYHMMVPLLTSYKSVQVTLQTDEVKNVPCGTSGGVMIYFDRIEVVNHLNANSIMDIVRNYTADYDKTLIFNKVHHELNQFCSIHTLHEVYIDLFDQIDENLRQALQRDLHEMAPGLFIQAVRVTKPKIPEVIRKNYELMEGEKTKLLIAIQHQKVVEKDAETERKRALIEAEKESQVAKIQYSQKIMEKESLQRISQIEDEMHLAKQKSMADAEFYKLTQQAEVNKLLYTPQFLELKKYESLALNSKVYFGNEIPQTFISTQQGNKEIK 318
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A2P2IA52_9CRUS (Erlin-1 n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A2P2IA52_9CRUS)

HSP 1 Score: 213 bits (541), Expect = 1.120e-59
Identity = 113/305 (37.05%), Postives = 188/305 (61.64%), Query Frame = 2 
Query:  323 SPIAWLAALGAACAVVGPILLSPYAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMP 1234
            SP+      G    V+  +L  P  +  V EG VGV   GG +L  T  PG+H ++PF  +     ++V+T  +R + CGTSGGVLI F  VE+++RL+P SV+  ++ Y  DY++ WI  +V H++N+LC+ ++L EI+I+ F+Q+D++L+  L+   ++W PGL +IA RV KP IP+ +   F  +E E+++L      +Q+V++ AE  R K V+ A+K  ++  +   R ++E+ ++L +  I++EM V R+  +ADA  Y+  +EAE N+  L+  FLELER +SL +N +   G ++P
Sbjct:    3 SPVLLAGVAG----VLMMLLCVPLGLHKVQEGCVGVYWIGGALLSSTTYPGYHTMIPFITKHRSVQISVQTDVVRDIPCGTSGGVLIEFEKVEVVNRLNPGSVIGLVKNYTVDYDRLWIYDKVHHEINQLCSTHTLQEIYIEIFEQIDELLLERLQREWNIWAPGLELIAIRVTKPRIPKLIGKHFDAMEAEVAQLTSVSAEQQIVLQEAETTRRKAVIEAQKILEVAKINCQRNIDEQKSKLQVSAIENEMLVARAVSNADAVFYAAKQEAEANKELLTTDFLELERVRSLSKNAKFIVGSQIP 303
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A482XPX8_LAOST (PHB domain-containing protein n=2 Tax=Delphacidae TaxID=33362 RepID=A0A482XPX8_LAOST)

HSP 1 Score: 210 bits (535), Expect = 9.510e-59
Identity = 109/286 (38.11%), Postives = 179/286 (62.59%), Query Frame = 2 
Query:  380 LLSPYAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMP 1234
            +L  ++V  + EG VGV   GG +L     PGFH +VPF        V ++T E++ V CGTSGGV+I+F  +E+++ L P SV   ++ Y  DY+KT I  +V H++N+ C+ ++LHE++ID FDQ+D+ L  +L++  +   PGL++ A RV KP IP+ ++ ++  +E E +KL I+ QH+++V ++AE ER K V+ AEK   +  +   +++ EK + + + +I+D MHV   K  ADA  Y   ++AE N   L+P FLEL+R++S+  N +  +G  +P
Sbjct:   22 VLMNFSVHKLEEGHVGVYYRGGALLSAVSLPGFHMMVPFITTYRSVQVTLQTDEVKNVPCGTSGGVMIYFDRIEVVNILRPESVYDMVKNYTADYDKTLIFNKVHHELNQFCSSHTLHEVYIDLFDQIDENLKLALQKDLTEMAPGLLVQAVRVTKPKIPEVIRKNYELMESEKTKLLISIQHQKVVEKDAETERKKAVIEAEKEMQVARIQFDQKIMEKESLMTMSQIEDTMHVATQKSRADADFYQTQKQAEANALLLTPQFLELKRYESIANNTKVFFGADIP 307
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A6P8ZB55_THRPL (erlin-2-B-like n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P8ZB55_THRPL)

HSP 1 Score: 211 bits (536), Expect = 9.620e-59
Identity = 116/316 (36.71%), Postives = 191/316 (60.44%), Query Frame = 2 
Query:  338 LAALGAACAVVGPIL--LSPYAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMPEYIRDRTGNNRVKD 1276
            +A   AA AV   I   L  +++  + EG VGV   GG +L  T  PGFH ++PF        V ++T E++ V CGTSGGV+I+F  +E+++ L  +SV   ++ Y  DY+KT I  +V H++N+ C+ +SL E++ID FDQ+D+ L  +L+   +   PGL I A RV KP IP+ ++ ++ ++E E +KL I+ QH++LV ++AE +R K ++ AEK   +  +   +++ EK +   + +I+DEMH+ R K  +DA  Y   ++AE N+  L+P +LEL ++KSL  N + ++G  +P      TG+  + D
Sbjct:    1 MAGNAAAIAVAVGIFSFLVNFSLHKLEEGHVGVYYRGGALLSNTSQPGFHMMIPFITSFRSVQVTLQTDEVKNVPCGTSGGVMIYFDRIEVVNILSASSVFDIVKNYTADYDKTLIFNKVHHELNQFCSVHSLQEVYIDLFDQIDENLKTALQRDLNEMAPGLYIQAVRVTKPKIPEMIRKNYEQMEGEKTKLLISEQHQKLVEKDAETDRKKAIIEAEKEASVAKIHFGQKIMEKESLQRMAQIEDEMHIDRQKSRSDAEFYQLKKQAEANKLLLTPEYLELTKYKSLTANSKIYFGPDIPNLFVHGTGHQPLTD 316
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: W4GJH2_9STRA (PHB domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GJH2_9STRA)

HSP 1 Score: 209 bits (531), Expect = 2.120e-58
Identity = 107/283 (37.81%), Postives = 172/283 (60.78%), Query Frame = 2 
Query:  389 PYAVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMP 1234
            P ++  V EG VGV   GG +L    +PGF++ +PF        V V+T  +  + CGTSGGVLI F  VE+++RL    V  T++ Y   Y+KTWI  ++ H++N+ C++++L E++ID FD LD+ L  +L+   + W PG+ IIA RV KP IP+ ++ ++  +E + +KL IAH+ ++++ + AE ++ +  + AEK   +  + M +E+ EK +   I  ++D MHV R K  ADA  Y   REA+ N  RL+ AFLE  R  SL  N + ++G+++P
Sbjct:   17 PLSLHTVNEGYVGVYFRGGALLSDVTSPGFNWKMPFVTSCFHVQVTVQTDHVDNIPCGTSGGVLISFDKVEVVNRLRTKDVYDTIKNYTVHYDKTWIFDKIHHEINQFCSKHTLQEVYIDLFDTLDESLAKALQRDCNEWAPGIEIIAVRVTKPKIPESIRHNYADMELQKTKLLIAHETQRVIEKEAETDKKRATIEAEKVSAVSKINMLKEIAEKESIQKIHALEDIMHVDREKAWADAEYYKSTREADANAARLTEAFLEYTRILSLTNNTKIYFGEKIP 299
[Close]
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Match: A0A131ZW81_SARSC (Erlin-2-B-like protein n=2 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A131ZW81_SARSC)

HSP 1 Score: 210 bits (534), Expect = 2.840e-58
Identity = 111/292 (38.01%), Postives = 184/292 (63.01%), Query Frame = 2 
Query:  365 VVGPILLSPY-AVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEIRQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYE-DYEKTWIIQRVEHDVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAKPTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNRDIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGNERRLSPAFLELERHKSLYQNLEAHYGDRMP 1234
            V G I L+ Y ++  + EG  GV   GG +L +  +PGFH ++PF        V ++T E++ V CGTSGGV+I+F  +E+++ LHP++V   +R Y  DY+K  I  ++ H++N+ C+ +SL E++ID FDQ+D+ L  +L++  + + PGL + A RV KP IP+ ++ ++  +E E +KL I+   ++++ ++AE ER K ++ AEKN  +  +   ++V EK +   I  I+DEM   R K HADA  YSK + AE N   L+  +LEL+R++S+ QN + ++GD +P
Sbjct:   11 VFGVISLAVYNSIHNIEEGHTGVYYRGGALLKEISSPGFHLMIPFITSFRSIQVTLQTDEVKNVPCGTSGGVMIYFDRIEVVNILHPSAVHDIVRNYTADYDKALIFNKIHHELNQFCSSHSLQEVYIDLFDQIDENLRTALQKDLNEFAPGLTVQAVRVTKPKIPEAIRKNYEIMEAEKTKLMISIHRQKVIEKDAETERKKAIIEAEKNSQVSQIINEQKVNEKESLKKISTIEDEMFFNREKMHADAEFYSKAKLAEANSLLLTKQYLELKRYESVAQNSKIYFGDSIP 302
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.46.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHK6_9PHAE4.900e-16473.26PHB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5KML6_9PHAE7.000e-6137.67PHB domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7M7NES8_STRPU9.070e-6138.30PHB domain-containing protein n=1 Tax=Strongylocen... [more]
A0A224XN48_9HEMI4.460e-6037.76Putative prohibitin-related membrane protease subu... [more]
A0A8J9Y3A5_BRAAE7.830e-6036.33Hypothetical protein n=1 Tax=Brassicogethes aeneus... [more]
A0A2P2IA52_9CRUS1.120e-5937.05Erlin-1 n=1 Tax=Hirondellea gigas TaxID=1518452 Re... [more]
A0A482XPX8_LAOST9.510e-5938.11PHB domain-containing protein n=2 Tax=Delphacidae ... [more]
A0A6P8ZB55_THRPL9.620e-5936.71erlin-2-B-like n=1 Tax=Thrips palmi TaxID=161013 R... [more]
W4GJH2_9STRA2.120e-5837.81PHB domain-containing protein n=2 Tax=Aphanomyces ... [more]
A0A131ZW81_SARSC2.840e-5838.01Erlin-2-B-like protein n=2 Tax=Sarcoptes scabiei T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:126980..139711 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G2K3
Preferred nameERLIN2
PFAMsBand_7
Model size2052
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004713,GO:0005488,GO:0005496,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0010894,GO:0012505,GO:0015485,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018108,GO:0018193,GO:0018212,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0023052,GO:0030163,GO:0030433,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031625,GO:0031984,GO:0032933,GO:0032934,GO:0032991,GO:0033554,GO:0034976,GO:0036094,GO:0036211,GO:0036503,GO:0042175,GO:0042221,GO:0042304,GO:0043161,GO:0043170,GO:0043178,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045121,GO:0045540,GO:0045541,GO:0045717,GO:0045833,GO:0045893,GO:0045922,GO:0045935,GO:0045939,GO:0045944,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051055,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051603,GO:0051716,GO:0055085,GO:0060255,GO:0062012,GO:0062014,GO:0065007,GO:0071501,GO:0071704,GO:0071944,GO:0080090,GO:0090181,GO:0090206,GO:0097159,GO:0098589,GO:0098805,GO:0098827,GO:0098857,GO:0106118,GO:0106119,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1902680,GO:1902930,GO:1902931,GO:1903506,GO:1903508,GO:2000112,GO:2001141
Exons11
Evalue5.98e-184
EggNOG OGsKOG2962@1|root,KOG2962@2759|Eukaryota
Ec32 ortholog descriptionBand 7 protein
Ec32 orthologEc-11_002550.1
DescriptionSREBP signaling pathway
Cds size1158
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.46.3prot_P-littoralis_Contig66.46.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig66 127630..139467 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791374.957795-UTR-P-littoralis_Contig66:126979..1276291680791374.957795-UTR-P-littoralis_Contig66:126979..127629Pylaiella littoralis U1_48UTRP-littoralis_Contig66 126980..127629 -
1680791375.1412294-UTR-P-littoralis_Contig66:139467..1397111680791375.1412294-UTR-P-littoralis_Contig66:139467..139711Pylaiella littoralis U1_48UTRP-littoralis_Contig66 139468..139711 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791374.9709525-CDS-P-littoralis_Contig66:127629..1278211680791374.9709525-CDS-P-littoralis_Contig66:127629..127821Pylaiella littoralis U1_48CDSP-littoralis_Contig66 127630..127821 -
1680791374.981841-CDS-P-littoralis_Contig66:128581..1286591680791374.981841-CDS-P-littoralis_Contig66:128581..128659Pylaiella littoralis U1_48CDSP-littoralis_Contig66 128582..128659 -
1680791374.9935822-CDS-P-littoralis_Contig66:128889..1289541680791374.9935822-CDS-P-littoralis_Contig66:128889..128954Pylaiella littoralis U1_48CDSP-littoralis_Contig66 128890..128954 -
1680791375.002724-CDS-P-littoralis_Contig66:129410..1295071680791375.002724-CDS-P-littoralis_Contig66:129410..129507Pylaiella littoralis U1_48CDSP-littoralis_Contig66 129411..129507 -
1680791375.0120351-CDS-P-littoralis_Contig66:134683..1347431680791375.0120351-CDS-P-littoralis_Contig66:134683..134743Pylaiella littoralis U1_48CDSP-littoralis_Contig66 134684..134743 -
1680791375.023166-CDS-P-littoralis_Contig66:135468..1355911680791375.023166-CDS-P-littoralis_Contig66:135468..135591Pylaiella littoralis U1_48CDSP-littoralis_Contig66 135469..135591 -
1680791375.0327697-CDS-P-littoralis_Contig66:136016..1361151680791375.0327697-CDS-P-littoralis_Contig66:136016..136115Pylaiella littoralis U1_48CDSP-littoralis_Contig66 136017..136115 -
1680791375.0453227-CDS-P-littoralis_Contig66:136997..1370491680791375.0453227-CDS-P-littoralis_Contig66:136997..137049Pylaiella littoralis U1_48CDSP-littoralis_Contig66 136998..137049 -
1680791375.056605-CDS-P-littoralis_Contig66:137694..1377961680791375.056605-CDS-P-littoralis_Contig66:137694..137796Pylaiella littoralis U1_48CDSP-littoralis_Contig66 137695..137796 -
1680791375.1098998-CDS-P-littoralis_Contig66:138295..1384341680791375.1098998-CDS-P-littoralis_Contig66:138295..138434Pylaiella littoralis U1_48CDSP-littoralis_Contig66 138296..138434 -
1680791375.1301568-CDS-P-littoralis_Contig66:139316..1394671680791375.1301568-CDS-P-littoralis_Contig66:139316..139467Pylaiella littoralis U1_48CDSP-littoralis_Contig66 139317..139467 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig66.46.3

>prot_P-littoralis_Contig66.46.3 ID=prot_P-littoralis_Contig66.46.3|Name=mRNA_P-littoralis_Contig66.46.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=386bp
MSSSSSSRHHSAGPDDGRGGRTDGRHSPIAWLAALGAACAVVGPILLSPY
AVQVVGEGSVGVLRFGGKILDKTKAPGFHFVVPFFHEVTEAPVNVRTTEI
RQVACGTSGGVLIHFPLVEIIHRLHPASVVSTLRAYEDYEKTWIIQRVEH
DVNKLCARYSLHEIHIDKFDQLDDMLVASLKETASVWVPGLMIIAARVAK
PTIPQQLQGDFVRVEEEISKLKIAHQHEQLVVRNAEMERSKQVMAAEKNR
DIGGMTMAREVEEKAAELHIQRIQDEMHVTRSKDHADATSYSKLREAEGN
ERRLSPAFLELERHKSLYQNLEAHYGDRMPEYIRDRTGNNRVKDDGKSNI
DGDGGDDGVNIARGAAAFWRAGADTDSVAETATAV*
back to top

mRNA from alignment at P-littoralis_Contig66:126980..139711-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig66.46.3 ID=mRNA_P-littoralis_Contig66.46.3|Name=mRNA_P-littoralis_Contig66.46.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=12732bp|location=Sequence derived from alignment at P-littoralis_Contig66:126980..139711- (Pylaiella littoralis U1_48)
CTCGTATATCGTACCTGAGTTGTACATTTCACATCGGTTCAGCGGTCCAG
CTGCAGTATCTGGTGCACCTTGTGAGCTCTGCCATCTCTCTCTCTCTCCT
TCCGCCTGTATCTCCCCCCTCCTCTTCGACTCTCTCTACACAGGACTCGC
GACACCGCCCACCTCTTTCTTTGCAAAGGAAAAAGGATGGTCCTGGTGGT
GGTTTGAACAAAGTATCCCCGCAACTCACTCACAAATTCCAGGGATGTCT
TCTAGCAGCAGTTCTCGCCATCACTCTGCCGGTCCTGATGATGGCAGAGG
GGGTAGGACGGATGGCAGGCATAGCCCCATCGCATGGCTTGCTGCACTCG
GTGCTGCCTGTGCTGTGGTTGGGCCAATTCTCCTCTCCCCCTACGGTGCG
ATCCATGTCGATACAGCAGTTGTTGGGTCACCCGAGGGTGCTGCAGCCTC
TCTCTATGATACTCCGATGACAGATAACCTTGTGACATCTTTGTGCGGCA
GCATTCCCACAAATGGACTTCTTTCACATTGTACTTACAGTAGTATAAAT
ACATGAAGACTTGTCCATGTGTCCAGCGTACAGGAGTCACAGCATTATCA
CCAGCGATGTTTCAACACCGTCTGTATGGATCATACATTGGTAGGGGGAG
TGCTGTGGGGTCTCGCGTGTGCTGCCAATGAAAGTCCTCCATCGCGCGTT
GAGCCGCCCACAAGCACACACACCCCCTCCATACGTGCAAGCGCAATGTG
GCGGCTGCGATCGGACACACCAGCGATATCAAGCCGGATGGCACTCTACT
CCTGTACCGGAGGCGCGGCTTCCAGATTGTAAAAAAGTGTATCATGATTT
CGGTGGTTGGTGGGGTTGTTCCGGGAGCTACGCTCTCGTCGAGAAGTCTT
CTTTGGAAAGAGCCATAGAGTGACAACTCTGATGCTGCGATTGTTTTTCT
GTCGAAGAACGTCACCCCCTACTGGTATACCCAACTCATCGTATGCACCA
GTCCTTGTAAATCATTTGGTTCCCCGCGGCGCAGTGTTTGCTCGTTACGA
AGTACCAGGTACTCAAGGGTTTTACACGCTGTGTAAGCTGATGGAGGTGA
TTCCCAAAGGAGAGGCCAATGCGAAGGTGTGCTTCGTGCTATCAACGTCT
TGTGTCTCATCAAAGGGAGGGCGGTGTTTGACATACCCCACTCCCGGCCC
CCCCCCCCCCCCCTTTTCCCTATTGCACAACGGGCAACGCATGCATCTGG
CACAATCTTTTGTTTGATTTGGTAAAGCTGTTCAGGTGGTGGGAGAGGGC
TCCGTGGGGGTACTACGATTCGGCGGAAAAATTCTGGATAAGACGAAAGC
CCCAGGTTTCCACTTCGTGGTGCCGTTTTTTCACGAGGTCACCGAGGCCC
CGGTAAACGTCAGGACGTGAGTGTGGTTCAGGAGGTGTGCGAGAAAATAA
TTACTTCGAATCATACCTTTTAGAAGCTCGTGGGCCTCCCAGGGCAATAT
AAATATTTCTGTTTTTCAAGCGTAAACGGTAGCCCACACGAGAAGGGCGA
AATAAATTGTGCACTGCCACATAATACCCTCAAGGATAGTTTTGGAAGTA
CAGCACCGGCAACTGCTGCACTTTGCCGTGATACGGCCTTTTTCGCGTGC
TTTCTCCCTGGCGATACCGACGCGGAGCACTTGGTCTCATTTGGCTGATT
AGAGGAATCAGCAGCGTCATTTCTTTGTGTCTGCGTTCTGGAGGACGGCA
AGCTTTGAGCCGGACCGCTCAACACGCTTGAGGGCGCTCCTTCCTCCTCC
CAGCTAAGCATTAGTTTCCTGCGGCGATAAACCACCACGTGTTTTATTCA
TGTAGCATTTTCCCCACACGGCCTCGTCCTCTGCATTTCGCTGTTGTGCT
ACCGCTCGTCCGCAGCACGGAGATCCGGCAGGTGGCGTGCGGCACGTCGG
GAGGCGTTCTGATCCACTTTCCATTGGTCGAGATCATACACCGCCTGCAT
CCCGCAAGCGTCGTCAGGTCAGACAGAACAACAGACGGACGGAGAGAGAG
AGAGAGAGGGAGAGAGAGGGAGAGGGGCAGGGACGGATATATAGGTGATA
CATACCAATCGGAGAGAACACGCCGTAACGCACTGACCTCGACACCAACA
AAGAGAGCATCGAGCTGGCCAGTCTCCATGATGACGTTCCCGACGGCTGT
CGCAAATGTTTTCAAGCGTGAACCAAAAGGAGAGTCACGGAATCGGTATT
TATCAGTCGAACGTTTTGTCTCGTGAAATATCCACCTTGCCTTTTGACAA
TGCGAAGTTGATTATTTCGTTGCGGACTCCAACGCTTTGCTTGTACTAAG
CATGTGAAGAGACATCGTCGGCTGTCAAGGGCGCGGGTGGTAATACACGC
ACGAGGCGCCTGGCCGAAGACACTTTTCTGAAGACGCCAAAATGGTCGCT
TTTGGTAGGGGAGCCAGGGGTGGATGATGCCATGTTTCCGTTTTGTCCTC
TGTGTTCTTTCACGAGAACCGTTGCGTCCCCTTGATACATCTCTTTTACT
TCAGAAGTCTCATCTATGCTTTTGGCGTGGGCTGATTGTCTGCGCGTGTT
TCCCTCGACCCTGTACCCCCCCCCCCGTCCCACACACGTTTTCTTGTTTG
CGTTGCAACCAGCACGCTAAGAGCGTACGAGGACTACGAGAAGACGTGGA
TCATCCAGCGCGTGGTGAGAGACAGTGGCAGATGAGGGATGTCCAAGAGA
ATGGGATGCGTGCTCGTGAGGAGACGTCCAACACATCGAGAAAAACGGGG
CCAGGGGGAGGGACTAGGGCGACAGAGCCAGGTTATGGCAAGAGATAGGA
GCAAGCGGGTAGAAACAGACGGATGAAGATACCACGCAGCAAGAGTTGGA
GGTACCAAGGGCGAGCAATAGGCCCACGTGTCCACACACCCTGCCGAAGA
ATACCGCACAGCGCAAGAGCCGACAGGTCGGATACTTCGAGTGCCCAGCT
TGTGCCTGATGTTTGATACCGTTATTTGTTTGTCGCGGTGCGGCATCTTG
GGAGCGGCAATACTGTAACCACCACCGCCCCTTTCATGTTCGAGGTTCGG
CACCGCATGTCGGCGACGGCCCATTCCTACACCACGTTCGCAGTCGTCGT
TTATTTTTGTATTTTCGTATCGGTACCGTCACCCCCCCCTCCTGGCTTGA
ATCCAAAGTCTCGGTACACCTCAAAGCCCGTTGTGGTGGGCACAGCCCCA
ACCAACATACACGCATATTTTTAAGACGGCTTGGTAAATGCTGATATAAT
TCCAATTTCATTTATTCATGGTTTTCCTGCTAGCACGATGTTTGCCTGAT
TCGTGACCACGTGCTAGATTTTGGCGGTGAGCTAATCTAAGATTCAACAA
CAACAAGGACATCAGCAATGAGAACAACAAGCACAACGACAACATAGTTG
TGCACAGCACAGTACACAGTAGATACGTAAGCCAGCTTTGGTACCGAGAC
CCCCCTTTCTGCGAAAGCACAGTCACAACGGCCAAGGATGCACGCGCGGC
GTGTTTGGTGAGCGCGCGCGCTTGTTGTGTAAAATACTCTCCCCAGGAGC
ACGACGTGAACAAGCTCTGTGCCCGCTACAGCTTGCACGAGATTCACATC
GACAAGTTCGACCAGCTGGACGACATGCTGGTGGCGTCATTAAAGGTTGA
GTGAGCCCCGTGATTTCGTGTGTGCCTGTCTGTCTTTATCCTATGATATT
TACGTCGCATCCATGGGCGACGTATCATCAAAATTGTTTTGCGTCGTCTG
TGCCTGTCATGCTTCATCCAATTCTGTCGCATCCATGGGCAGCGTCATCA
CAATTTTACATTTTTGCGCAAGCGGCCTTTTCTGGAGCGCTTCGACTGCT
GTAACCAATCGCTCCAGGAAAATTACGTACTGCCGTACCCGCTCAAAATG
CTCAGGTGCAAGCAGTACTCGTCTGAGCTAGACAATAGTTCCATTTTGTC
ATGCATCGCCCGAAACCATTCTTCTCCTTGCTCCAGCTCGCGCTGCATAC
GGCGCCACGGACTTCGTCGCCTCGACTTTCCCCAGCCGTACTTTGACACT
TCCAACCTGCCGTTCTGCAGGAGACGGCTTCGGTGTGGGTGCCGGGCTTG
ATGATAATCGCGGCGCGCGTGGCGAAGCCCACGATTCCGCAGCAGCTGCA
GGGCGATTTTGTTCGCGTGGAGGAGGAAATATCCAAGCTCAAGGTGCAGG
CACGAAGAAATGGGAGTTTGTGCTTTACGTTGTCCCTCATTAAGGTAGTT
GTTGCTCTTCACGAGTCGTATGCCCTACTCTTACTGGCAAGTACTTCAGT
GTTGAACAGCCTTTGGTCCTGTGGTGGCTGATACTTCGAAGCACGTGCAG
GCGGTGAACAAGATGGCTGCGGCGGAAGTCGTGTGGGCACCAATTTCGCA
CCCTCGGGTGTGTGGCGTGGTGAGAGGTAAAGAGCAACGCATTGCTGCCG
TTGCGTGCCGTCTTGCTCCCGAAATTGTGTTCTTGCTTGCCTGTCTGGCC
CGCCTGACCACCTGGACCTCAGGTATTCACTCTGTCGACACTGTTCATCA
ACCCCTCTACCCGTGTTTCCGCCTGCTCTTGTCCGCCTGGGGCTGGGTCC
TGCTCCCTCGTCTCTGCTCACCACCATCTTGTTTCTTTTTTTTCAGCCCC
TAGCTTATTGTGGTGCTTGCTTGCGTGCGTGCGTGCGTTTGTCTGTGAAC
GATTTTTACCTCGTCGCTGTTCCTCAATGACGCTCTCTCGCGAACTCGGT
TCTTTCCCGCCTGTGGCCGCCAACTAGTGCCTTACCCCTTTTCGTGCTTT
CAAACTTGCGTGTACGTACGCCATGCCTGCACTCATTGTGATGTTGACGG
GCGTAACGTCCCGCTGTCGCCTGTGTTCACTCACATGTTTCCATGCGTTT
AAAAAAAACGCCGTGAAGATCGCACATCAGCATGAACAGCTTGTCGTCCG
AAACGCGGAAATGGAGAGGTCGAAGCAGGTGAGAAGAGTGAACAATCGAT
TGCCGCACGCAGCTGCTATGAAAATGTTACGTCTTCACTTGCTCTACTCG
TGTCGTGAACTTTTCAAGAAATCAAGTGTCGCCCGTAAGGAGGTTGCTGA
GAGCCAATAAGGCTCTCATGCTGGGTTATTTTTGCCACCCATTTGGTCAA
TCATCATATGTTGATGTTTGTTGCTGTTGCTGTTGCTGTTGTTGTTTTGG
TTGTGGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGATTCCCGCATTAGC
CAGCTCGTGGCTAACGTCTAGCCCGTGATCACAAACAAGGCAAATTTTCG
AGCTAGGAGGAAGTAGAACGAAACGATGAAGGCCACAAACAGTGAAACCG
CCCAACGGGAGTTTCTTCTGTGGTGGCTGAAAGTTCAAATTAATACTTCC
TCTGTATCATAAGTCTGTGCAGTTATGGGCGTGTAATTGTTTGCGCGCCC
ATACTGTTTCGATCATCCTATAGTTAGGTTCGTTCGAAAGATGAAGTCTC
AAAGAAGCTGATGCAAAAAAAAAAGCAAAAAAAAAAGCCAGTTGTTTGTA
CTAAAATGAAGTCTTTTTTGTTAGCCGCTAGCCCATGCAGGGTAGTGCGC
AAGAAAAAAAAAAAATGTGTTTCAGCCCAAAAAACTCCGAAAATTTCGAA
AAAATTATCGCCGAAGAAATCGGACACCGTTAAGGGGGCGTAAAACATAA
CTGCACAGACTTATGATACAGAGGAAGTAGTAGGGAAATCACAAAAGACA
ACAAAATAGGACCAAAACGTATCAATGGACCCAAGAAGAGGGAACTAAAA
CGAACAAAGCTTTAAAGAAATCGAGGAGAGAAAAAGAGAAAAACTAAACG
ACGAAGGTACAACAAGATAAATACAGCAAATTCAAATAAAATTCTAGCAA
GGAAATGAAGGGAAGGGAAAGGGAAAGGAGGGAATAGAAGGGTATAAACA
CGTTGTAAGTCATCCACATGCCCCGGCACAGGGTCCGCCTGCTCACGTTG
ACCTCCTCCCGCGCACACATGCCTCCCAACACTCGCACCACAGCCCATTG
ACGTTGCGTATGTCCTTCAGCTTTAGTGGCAACACCATCCCGCGACTTCT
GCCTTTCACCTCCGTTGACCCTACAACCCCGCTTCATGGATTGCTTCGTC
TTCCCTATAACTTGAGCAGCAACACCACACTCCGCTGCGTGGGGCCCCTC
AGCCCCCCATGTTTCTCCTCGCCGTCCGCTCTCTTGTCTTGACCGTGGCC
TGTCCCTCGACTGCGCCCCTTTTCAACTGGCTTGTCTCTTTGGCGTCTCC
TTGCCCTCCGTGCCACTCGTCCATGAACTTTTGCTACCCGCCTCGACCGT
GTGTTGCCATTCTTTCGCTCTCTTTGTACTCGCTTCTCACCCTCTCTTGT
TGGCGACCATACCGAACGCTTGGAGGCCCTTCTGCGGTTGCTTGCTTCAG
CCAGTTTAACTCTTGCCCCTCCAAGTATTCCTCGTCCCCCCCGCATTCTC
CCAGCAGAGCAATCGTCGGGGGGCGGGCGTCTCCCATGTGCGTGACGAAC
CACATACCTGGTAGTTTCAATGACTCACCGCAACCCGCCTGGCGAGGGGC
TGGGCGTACGACAACTGGGGCGGTCCGCCCTCTCCGCCATTTTCTATCCG
ACGCAGCGAAGGAAGAAGAGGTGGGTGGTGGCATGCCGTCCGAAGTCTGC
CGTGGTTGGCTTTGGGTTCCGTGTGATGTACTTGTGCAGCAGGTTATCCA
AGACGCCGACTGAGAGGAGTCGTACCTCAAGCCGAAGGGGTCCCCGCCGA
CGGTCGTACATTGCTCGTCTACTGCGCTGCAAGCAGATATGCTCTCGCTG
TGCTCGGTGGTTGATTTCATCCTCGACGCCCCTGTCCTCGCGGATCTTTC
CCCCGAGATACACCAACGCGTCCGTTTGTTCGAGCACCATCCAGCGTTGA
CCGTGAGCAAGCACGCCTTGTTCCCTTCGGCGAGCATGCACATATTCTCC
GTCTTGGACTCTGGTACTGACAGTTCAAAGCGCGCGGCCACACGCACGAT
GATTCGACACCACCTTCTTGAGGCTCCCCGGCGATCGATAATTAATGCCC
CCGTCGTCGGCCTCATACCCGTGATGGATTGCACTGCTTCACCCGCTCAG
CGCTCTTCCCCTTCCCCTCCGTCACCATCCTATTGACCCTGAACATGTCC
GCAATCAAATCCTCGTCTTCACGGAACCACTCGAAGTCGATCACGAGCAT
TGCAGCAAGTAAAATATTGAAAAGCAGGGGCGCCAGGTTGCATCCCTGCT
GGAGTCCCTGTCCCACATCGAACCAGTCTGGGCACGTTCCGGGGTCCATC
CGTACGCGCGTTCTGCCGTCGTGAAACCGGCGAATGACCGCAAGCCTCTT
GGGGGTCACGCCGAGCTACTTTGGCACCGACCACAGTAGCCCTCGGTCTA
CGGGGTCGTAGGCGGGATTGACGACCCAGGCGCATCGTGGGGTGGAGGCG
TCGAACCACGAGTACCATGTCGACGGTTGTGTGGTTTGATTGAAAGCCAC
TTCTGCTCCTCCGGAAGGATGCCCTCTCGTTCGCAGTATGCACCCAGTCG
GGTGGCGTTCAGCTGGATACGTACCTTGTCAGCGTCCGCCACAAGGGAGA
TGCCTCGGTAGCTGCCGCACTTTGTCTTGTTCTTCTCGTTGCGGCACCTT
GAACGCGAGGTCCTTCCATTGTTGGGATACCGTTCCCGGCAGCGATATGG
TTTCAATCATAGCGTAGGGATGCCCGAAAGAGCACTTGGTTTCCGTTGAG
AAATTGCTTTAGTCCCGACAGAAGCTTGTTAGGCCTATGTAGAACTTTCA
TGTTCGGCATCGCACGGATTTTTCGTTCAGCTTTAAACATCTAGAGGTCC
GCCGTCGAGCAGTACGCACGCAGACCAGATCTTGATCTTGTTGATCAAGG
GTTGGTGTCTTGGCGTTGAAAAGGGCGTTGAAGCACCTGGCCCTTCGCTC
GCGGATGAGTGTGGGGTTCCGCACCAGATTGCCATCTTCGTCCTTGATGT
TCTTTGAAGTTAAGGGCCCTATTCTCCTTCACATCCAGTCCCTCAACGTG
CTTGTGGGAGCCGGCTTGGTTCCTTTCTCGGCTGTTCTAGTCGAGCTGAC
TCACGACCCCCTCGAAGAACCTGTCCGTGGTGCTGGCTCTCAGTTGGTCA
AGTCGCTTATCGCGACGCCTCTAGGCTGCTCCGGCAGGTGGGTTCTTTTG
GCGCTCACGCTACCGCTTACGGACATCGTGCCTCTTTTGCCATGCCATGT
TTGTCTCCAGCTGCAGTTCCTCACACATGCGCACCAACCACTGAGTAATC
TATATGCCCCGGGGGGGTGACATCAGCGGCGGTAGATATCAAAGCAGTCG
TCCACGCCGAAGCCGCTTCGTCCACATTCGCACCTTCCATGATGGGGGAG
ATATATCGCTATTACTTTTTTGGAGATGAGGGTCCGCCATCAGCCGTTGC
AGGTCAATGCTGGCGGAAGTCTGCTTTTGTTGTCTCTTGCTCGTCCATTT
GGGGCTACTCGGCCCGGGAGGCGGGCGTTAGCGGGCACAACCTTGTGGTC
GCAACCTTGTGGCCGAGGCGCCGTACAGAGACCTTATATACCAACCGCAG
CTTCGCCGGGCGGGTAAGAATGTATTCGAGCCGGTAGTCTTCCTTCCGCG
GTTGGAGCTTTTGAATGTGTTTGGCATCCCACACTTGGGGTGTGCAGAAA
ACTAGTAGAGGACCGATAGTCAACCACTTGGTACGAATTCCACCAGTATT
CATCTTTGTCTTTCCGCTTGTCGCGTCTGTACGCACACATCACCCTGTCG
GGGTGCTCAAACCCCTCTGCTACCAGTCCGGGCACTCGTATCCACAATGA
CCACGAGATCGTCTCCACTAGGTACCTATAATCTGTTCTTCACAGTTGCT
CCATCGTCCTCAGTGGGTGCGCATGCTACCACGAAAGACACTCATTTCGA
ACTGCAACGTCCTATCGAACCGTCATCAGTTGTGCGCTGATGGACTCCAC
CGTCATGCCCCCCTTCTCCATCTCATCCACGATAGACGGCTTGACCGCCA
GTCCGACCCTGTGCACTCCCTTCCTTCTCATCTTTCGTTCCAGCCCGCGC
TGTACCCTGCGGTGGTGAAGGCACCATAGCTCGCACGTCGGGTGTCCTGC
TGGAGGCCACCCGTACCACACTTGGAATTCGAAGAGATCTGAACTCAGAG
TTGGAGCTGTGGCCGATACCGTGGACGCCCTTGAAAGCGAGGGTGCGGGC
GATGAAGGAACCCACAAGTAGTTAGCCCACGCGTGTCATACTCCGAAATC
TCTGTCGATCTCTTCCGGTCTGCCTTCCTCAGGACCTGAGCGTGTTTTCT
CTCGTGTCGAGCTGCCTCTTCAGCGTGCTCCATCCATCGTGGCCAAGCTC
GGTTCGTGTCTACGTTCAGGCGGGCCTGGGGCGACACCCCCAGACAGCGT
CGGCGTGTAGCTCGACGAGTGTGCTACCTGACTATCATGTGATAGGTGCC
TCCTAGTCTCTATACTCTCAAGAGTATGAGTTCCTCGCTTTCCACGGCGA
TAGGCAGGCGTAGCTGCGGCGGACATTGCTGTCGCGGAAGCCGAGCAATG
GCTGGTCTCGTGTGTTCACAAGGGACCTGATAGGGTCGGTGACCCCAGCG
GGGGAGCACTCGAGGAGATCTGACCAGGGTCAGGTTCGGTATTTGTACCT
GTGGATGACTATCGTCTCTTCAATTACTGGACAGCCGGCTAGCGTGGTCG
ATGCTGCTAAGAATAGCAGTACACGCGCACACATATACAAGCGCGCGTTT
CCTGAATCTTGAAAGACGGCAAGGTGCTTGTCTTCCTTGGGTTCCGCCTC
ATACCACACTTGATCGGTGCCCGTTCATATCTGCACAGGACTGTTATTCC
ACCAATGTCAACATTACGGCATGAATCCTTCCGCAGAGGATAGCGACGCG
AGTAATATGGTGCCCCGCAAGGAGCCCTAACATTCTGCGTCGGATTTTGA
TGTACTTGGGCGGACATCAGGTTTACGGCTACCGTTCTCCATGCGTTGTT
TCTCTTGAGTTTTTTCTCTCCTGCTTGCTCGCTAAATCCGACGGCGTTGT
TTAGGTCATGGCGGCGGAGAAAAATCGAGACATCGGGGGCATGACGATGG
CGAGGGAAGTGGAGGAGAAGGCTGCGGAGCTGCACATACAGCGCATACAA
GGTGGGTGGGGAGGGTCCCTTCGCGGCCAGCCGGCGGTGTATATGTGTAT
GATCATGTGTGTGCACTTGTTCGTGTGGATGTTTTTATTTTACTAAGAGA
CCGTGCCAATTGGCTGACCGGTTAAAATACGTCAGTTAGGTGGGTCGGAA
ACCAATTTGTTTTCGTCAACCGGGGTGCCCGGAGATGCGATGTGTGTGCT
TGTGTGTTGAGACCACGCGATATGTTTGATGACTGAAGATCCGTCAGTTT
TTGCGTTCTTTTTTCAGATTACGTGTTCCGTGTCAGCACTGGATCTGTGT
CCCCTGTCGCACGCCGGCGTGAGGTTGTTTCCCTTTTCTACCGAGATCGG
ACCACACTTGGGAAACTCGTCGGATGCTGTGTTCTTCCCTCTACCTGCTG
CCGGTTTTCACGCTGCTTATTCCGCCTGATGCCTTCTTGCCTGTTGCGAC
GGCGCAGACGAAATGCACGTGACGCGCAGCAAGGACCACGCGGACGCGAC
CAGCTACTCCAAACTTCGAGAAGTGAGTGACTTCGGCACGTGCTGATTCT
CACAGGATGTCCCTTGGACGTGTTGTTGTCGTTGTTGATGTTGTTGTTGT
TGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTGAGTTTTCCACCGTCGGTACTGCTCTTCGTTATTGCGTGCATCGC
AGGCGGAGGGGAACGAGCGTCGGCTGTCCCCCGCATTTCTGGAGTTGGAG
AGGCACAAGTCTCTCTATCAGAACCTCGAGGTGCGTACTTGATGTTTCAG
CGGGATGGGAGCGTTTTTTCACAGAAACGCTCGACCGGTGTGTCGTGTAA
TGTCATCGACGCTCGCATCTCATTTCAAAGCCGGGATGGAGCAGGTCGTA
CTTCATCGACCAAGGAAAAGCTTTGCACCAAACGCGACGCGCTAGGTGAT
CGGCGAATCGCATGGACGACGAGCTGCGCCCCTAGGGCTTGTTGTTTTAG
GCGGAATTTGGCGCCTGGTGCTATTCAACAAATTGACCCATTGGGTTGGA
CCAACTTCAAACGACTTGTTTTGATTTCCTCGTTGTGTGACCGCTTCCAG
GAAAGCCACAGGAATACCAGCCCGAAAACCTTGGTGGCTGCCTGACAAGA
TACGCAATACGAAGGGTTTATCTACCCCGTGCTCTAACGCGGCCGTCCTT
TGCTCACATGATGAAACGCGTCACAAACACGACGGAGACCCTGGGTAGTA
CGCAGCACGGAACGTGTTGGAAGGGTTGTTATGTGGCTGTCAAGCTCAAG
CAATGCAACGGCGGGGTGGTGCTCATGGTCATTGCAACTCATAACACAGG
GCCGAAAGGTTGTCAGCCACTGACTATTTGAGGTCTTATTTTGGCGTTTC
ATGGATTTTTTTGTCCTCGCCATTGCAGAGAAAATGAACCCTGCTGTGCC
TCGACATGTTAAACCTCGTACTTCGAGTACATTTTGTTTTTCATCCATGC
GTTTTGTATCTCGTTTTTTAATCGGCCACTGTCGAGCCAGGCGCACTACG
GCGACCGCATGCCGGAGTACATACGCGACCGCACCGGCAATAACAGAGTC
AAAGACGATGGTAAAAGTAACATCGATGGCGATGGCGGCGACGACGGTGT
AAACATCGCCCGCGGCGCGGCAGCGTTCTGGAGGGCGGGGGCAGACACCG
ACAGCGTCGCCGAAACCGCAACAGCAGTATAGCGCGAGCCGGACAAGAGC
GCAGATGCGCCCTTGAAGAACCAAGAGGCACCCCCTTTTATTTAGAGCTC
CTCGTCCGTTTTGAATGTAGGGCAGGGCATGGCATGTTCGGATTTTTCTG
CAGGGTTTGGAGCATGGGCGCGATCTTTCATTTTCATGAAGTATGACTAG
CGCGACGTATCAAGCAGACGAAAAAGAGAGTAAGAGGTGGCACGCCGGGT
AGAAAAGGGGAGTTGCCGCCGGAGGTTGCTGCTCGTAACGACCAGGATCT
GCAGGGGCGAACAAGGAACCTTTATCAGCAACATACCCGACTGAGAAAAT
AGCAGTTGCCATTAGACACCAGTGCTGCGGAACCTTGAAGGATCTGACTA
CCATTGCTATAGGTGAGGGTTTGTAGCGGATTGCTTTGGATTTACCTAGC
ACTGAACAAGAGTACGAACAGCAGTCTTGACATTACGCAGCAAAATCAAG
ATTGCAAATTCTTTCGATCGACGTTGTGCTTTTGGGCATATACGCTCTTG
CACTCATGCTCCGGAGTGTTTGATGTTCGGCGCCCCCCAGGCAGCAATCG
AGGAGCACACGGATGGGTACGAACCCGAGTAGAAGTGGGCCTTTTGAAAT
GGCATCCGGGCCTTATGGAATGGCATCCGCCG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig66:126980..139711-

>mRNA_P-littoralis_Contig66.46.3 ID=mRNA_P-littoralis_Contig66.46.3|Name=mRNA_P-littoralis_Contig66.46.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1158bp|location=Sequence derived from alignment at P-littoralis_Contig66:126980..139711- (Pylaiella littoralis U1_48)
ATGTCTTCTAGCAGCAGTTCTCGCCATCACTCTGCCGGTCCTGATGATGG
CAGAGGGGGTAGGACGGATGGCAGGCATAGCCCCATCGCATGGCTTGCTG
CACTCGGTGCTGCCTGTGCTGTGGTTGGGCCAATTCTCCTCTCCCCCTAC
GCTGTTCAGGTGGTGGGAGAGGGCTCCGTGGGGGTACTACGATTCGGCGG
AAAAATTCTGGATAAGACGAAAGCCCCAGGTTTCCACTTCGTGGTGCCGT
TTTTTCACGAGGTCACCGAGGCCCCGGTAAACGTCAGGACCACGGAGATC
CGGCAGGTGGCGTGCGGCACGTCGGGAGGCGTTCTGATCCACTTTCCATT
GGTCGAGATCATACACCGCCTGCATCCCGCAAGCGTCGTCAGCACGCTAA
GAGCGTACGAGGACTACGAGAAGACGTGGATCATCCAGCGCGTGGAGCAC
GACGTGAACAAGCTCTGTGCCCGCTACAGCTTGCACGAGATTCACATCGA
CAAGTTCGACCAGCTGGACGACATGCTGGTGGCGTCATTAAAGGAGACGG
CTTCGGTGTGGGTGCCGGGCTTGATGATAATCGCGGCGCGCGTGGCGAAG
CCCACGATTCCGCAGCAGCTGCAGGGCGATTTTGTTCGCGTGGAGGAGGA
AATATCCAAGCTCAAGATCGCACATCAGCATGAACAGCTTGTCGTCCGAA
ACGCGGAAATGGAGAGGTCGAAGCAGGTCATGGCGGCGGAGAAAAATCGA
GACATCGGGGGCATGACGATGGCGAGGGAAGTGGAGGAGAAGGCTGCGGA
GCTGCACATACAGCGCATACAAGACGAAATGCACGTGACGCGCAGCAAGG
ACCACGCGGACGCGACCAGCTACTCCAAACTTCGAGAAGCGGAGGGGAAC
GAGCGTCGGCTGTCCCCCGCATTTCTGGAGTTGGAGAGGCACAAGTCTCT
CTATCAGAACCTCGAGGCGCACTACGGCGACCGCATGCCGGAGTACATAC
GCGACCGCACCGGCAATAACAGAGTCAAAGACGATGGTAAAAGTAACATC
GATGGCGATGGCGGCGACGACGGTGTAAACATCGCCCGCGGCGCGGCAGC
GTTCTGGAGGGCGGGGGCAGACACCGACAGCGTCGCCGAAACCGCAACAG
CAGTATAG
back to top