prot_P-littoralis_Contig66.218.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig66.218.1
Unique Nameprot_P-littoralis_Contig66.218.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length227
Homology
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BLAST of mRNA_P-littoralis_Contig66.218.1 vs. uniprot
Match: D7FN50_ECTSI (Death domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN50_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 3.040e-45
Identity = 80/110 (72.73%), Postives = 92/110 (83.64%), Query Frame = 0 
Query:    3 ILPSYSCIGERAAAIRGVERCLSEFCTVWSTTRLLDSHASEKTKRDFIFHLRPLLKHSPARERHEAVLVLCRRLFTPRNDVTESKSKHYVFAAAFEPEAGGYPLAGAFEE 112
            ILPSY C  ERAAAIRGVERCLSEFC VWST RLLDSHA   TK DF+FHL+PLL+H+ AR+RHEAVLVLCR +FTP+NDV ESK +H+VFAA F+P++GG  LA AF E
Sbjct:   62 ILPSYDCTRERAAAIRGVERCLSEFCIVWSTARLLDSHAESATKSDFVFHLKPLLEHTAARDRHEAVLVLCRGIFTPQNDVVESKWEHHVFAAVFQPKSGGSSLASAFAE 171
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BLAST of mRNA_P-littoralis_Contig66.218.1 vs. uniprot
Match: A0A6H5LCB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCB0_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 6.460e-30
Identity = 63/112 (56.25%), Postives = 77/112 (68.75%), Query Frame = 0 
Query:    1 QGILPSYSCIGERAAAIRGVERCLSEFCTVWSTTRLLDSHASEKTKRDFIFHLRPLLKHSPARERHEAVLVLCRRLFTPRNDVTESKSKHYVFAAAFEPEAGGYPLAGAFEE 112
            QG +P +    E+   IRGVERCL+EF  VWST RLL++ A  KTKRDF+FHLRPLL+H+PAR+RHE+VLVLCR LFTP ++   S+    V   A   E GG PL  AF E
Sbjct:  126 QGFVPKFESSYEKLVVIRGVERCLAEFTLVWSTARLLETCAPPKTKRDFLFHLRPLLEHAPARDRHESVLVLCRGLFTPGHNKEPSRVHDNVHGVALRQEHGGCPLEEAFSE 237
[Close]
BLAST of mRNA_P-littoralis_Contig66.218.1 vs. uniprot
Match: D7FXL8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXL8_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 7.560e-29
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = 0 
Query:    1 QGILPSYSCIGERAAAIRGVERCLSEFCTVWSTTRLLDSHASEKTKRDFIFHLRPLLKHSPARERHEAVLVLCRRLFTPRNDVTESKSKHYVFAAAFEPEAGGYPLAGAFEE 112
            QG++P +    E+   IRGVERCL+EF  VWST RLL++ A  +TKRDF+FHLRPLL+++PAR+RHE+VLVLCR LFTP ++   S+    V   A   E GG PL  AF E
Sbjct:  105 QGLVPKFESSYEKLVVIRGVERCLAEFSLVWSTARLLETCAPPETKRDFLFHLRPLLEYAPARDRHESVLVLCRGLFTPGHNKEPSRVHDNVHGVALRQEHGGCPLEEAFSE 216
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig66.218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FN50_ECTSI3.040e-4572.73Death domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5LCB0_9PHAE6.460e-3056.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXL8_ECTSI7.560e-2954.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig66contigP-littoralis_Contig66:675885..676902 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig66.218.1mRNA_P-littoralis_Contig66.218.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig66 675885..677153 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig66.218.1 ID=prot_P-littoralis_Contig66.218.1|Name=mRNA_P-littoralis_Contig66.218.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=227bp
QGILPSYSCIGERAAAIRGVERCLSEFCTVWSTTRLLDSHASEKTKRDFI
FHLRPLLKHSPARERHEAVLVLCRRLFTPRNDVTESKSKHYVFAAAFEPE
AGGYPLAGAFEEASVFPSIFRVCIPLPCLFAAYLSFLPSSLCFPLEGENA
HQLPGMSSDWRSRSSIVSDGFELLLNYCWCAGSRLWFTAVPDVVWCLILP
SRTSQPFLPSATMRNPIRKSCRDPNL*
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