|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 338 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 336 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791373.3659258-CDS-P-littoralis_Contig66:295795..295954 | 1680791373.3659258-CDS-P-littoralis_Contig66:295795..295954 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig66 295796..295954 + |
| 1680791373.3790529-CDS-P-littoralis_Contig66:296857..296983 | 1680791373.3790529-CDS-P-littoralis_Contig66:296857..296983 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig66 296858..296983 + |
| 1680791373.3927548-CDS-P-littoralis_Contig66:300734..300785 | 1680791373.3927548-CDS-P-littoralis_Contig66:300734..300785 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig66 300735..300785 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig66.84.1 >prot_P-littoralis_Contig66.84.1 ID=prot_P-littoralis_Contig66.84.1|Name=mRNA_P-littoralis_Contig66.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=112bp
MQTSAERPAGDMLAAATSRPRREDAFVREARRARRKALLKHLSEADDDLD
LDEVLKLAAAGTPEIGSLDSGRCGNDGNFDVEQDIFSSIDAQGQQALVSA
TEGVHDSSTTTA back to topmRNA from alignment at P-littoralis_Contig66:295796..300785+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig66.84.1 ID=mRNA_P-littoralis_Contig66.84.1|Name=mRNA_P-littoralis_Contig66.84.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4990bp|location=Sequence derived from alignment at P-littoralis_Contig66:295796..300785+ (Pylaiella littoralis U1_48)
ATGCAGACAAGTGCGGAGAGACCCGCGGGGGATATGTTGGCGGCAGCAAC
CTCAAGACCCCGGCGCGAAGACGCTTTCGTCAGGGAGGCCAGGCGCGCTC
GGAGAAAGGCTCTCCTGAAGCACCTGTCGGAAGCGGATGATGACCTTGAT
CTCGACGAGGTAGACATTTTGTGTAGTACTCAATGAAGTTTTTTTCTTTT
TTTGTACTCGGAGTACTTCGAAGTATACTCCACCACACTGCAGTAGTTTG
TACTCCGAGTACTTGATTTTAAGTTGCAGACGCCATGCTTTTTTGTGCTG
CCTGCTTGTATCGATGGCCGAAGTGCTCCCGAAACAGGCAGCACCACATC
GCGACGTGCGTGCGGATGTCATGTTTCAGGGAGATTGCTTGGTTTTGTTG
TGTCGTTGGTGTCATTGTTGGTGTCATCATGGAGGAGAGGTCGGGCGTTG
TTGATATTGCAGAGTGATAAGGAAACTGCTGTAGGCCACAACGCTGCGCG
TTTATTCGTGAGTGTGCTCCTGCTTCCGCGGCGTGGTGTGCTGTGTCCCG
CGCCATTAAAGCGCGACCAGACACGTGAGGTGAAAGGGTTGTGCGTGTGC
CACGAGCATACCTGTGTGTGAACGACTTGACTGCTGCCGATGGGGTGCAA
CTGCTGTGAACGCGTGCTGCCGCTTCTGCTGCTGCTACCCTTGTGGGCTC
CTCCGAGCTTCGTCGGCCGCTGTGTGCGTTTGCGGTCTGCCCCTCTTTGC
GCGGGTTGTGCTATCAGCTTGGGTCGTGTTGCAATGATATACCACTCCCC
CCGCGTGCTGTGTCCGTGCGGTACTATGCTCGAGGTGTAGAAAGAATCGG
CGGTTGTCTGTTTGGGCGGTTGCAATTTTTCAGCCATGTCTAGCAAACAG
GACAGGCGCTCTGTTTCCACCAGCACCAACACCACACTGCCTGCTTACGT
GAAAGCGAAATATGGTGTCATAAAGCAGGCGCCCTTCAGTGAAATCGACT
TGGGTTCCCACGGGTTGCTATCCTTACTCTTAATCCCTCATTGATCGATA
ATAAATTTGCAGGTGTTGAAGCTTGCTGCGGCAGGCACACCGGAGATCGG
CAGCCTCGACTCCGGCCGCTGTGGAAATGACGGCAATTTCGATGTCGAGC
AAGATATCTTCTCCTCGATTGACGCTCAGGGGCAACAGGTGGGAAAGACC
GGGATTGGAATATCATTTGCCATGCCACATATAAACGGCTTCCGTGGCAC
ACCGGGCCGGGTAGACCCAGTCTTGGCGGAGCTATCCGAAATTAACATCG
CTATTCAGGCTTAGGGTTATCGATATTGAAATTGTCATCACGAGACAATA
AATATGTTGGCATTGTTTTCATGGTGGGTGCGTGCGCGTTGTTTTCGGCG
TCATGGAACTGTATCGGAATCAGGCTGTTTCCAGCGAACGGGGTGCGTGG
AAGATAAAACTACCGTAAATACATATAAGCTTTTGTGTTTTCTTCTTCGG
AAAATTCTCTCAATTCCTTGGGTCGAAAACGGCCGGAGATGACAGCTGAC
TGTTTTTATGTGAGCGGTTCAGCGAACGGCCCAAAAAACACGTCAGGTCC
AACAGCTGTTTGGTGAACAGTAACAAAGCAACAGCTGTTGACGGGTGAAC
AGACCGACGTCAGCAGCACCAGCTGGTGATTGGCCCCACAAAAAACGTCA
GCACGCCAGCTGATGAATGTTTTACATGCGCCTGATTCCACAAGCAGGCG
GCTAGACTACATATATGGACGCACGCAACGTACGTGTACATAAAGCACAG
CAGTAGTATAGTCATGCACACGTGTGTACATAGCAAGCAAGCCCAGATCG
CCTCGCATCTCACTTTTGCCGCGCTCGATGTCCAGCATCGCGTACCTGAT
GCTACACTGCTGTAACAACCAGTCAGAGCGAAAAAGAAAAGTCAAACGCG
CTATATACGGACGGGTGACTGCTGTGTGAGACCTGTTTTTACTTTGCGAT
AGTAATAGTGAGACAACAACCAGACAGATAGACAAATGCTGCTTTCAGTG
CTTCCGCGCCGGAGCTCCATATCTATCTGCACATGTCTGAGAGTGTCGGA
TTGGCTGGTTGAGGCTTGCGGTCGTGAGCTCGTGGCATGAGAGCGGGTTT
TAAACCCTTTGACCCCCCAGAGGTCTGaAAAAAATAATCATGGAGCCAAA
AGTTAACTTAATTCCGGTGCGCCGATGATTGGCGAATGGTGGGCAGTCTC
AAAAAAAAATGGCACTGACGTCTCGCTGGCTCTGTCCGGTGAAAAAACGG
TGCGACTTGGTTATACACAGAAATCTGTCTCCAATTTGCCCTGAAAGAAA
TGGGGACAGATTTCAGTCTAAAGCTACACAAACTTTTTTGGCGGGGTCAA
CTACACAAAAGTTGTTTGTTTAGTTTTGCAGAATATTTACTTCAAAGGGA
TACTGCTGTATGCAAGGTAGCACGCAGCAACACCGCCACTTAGCATGGCA
GATCAGGGTACCCCGCTCGACAACCACACAGCAGTAGGGTTCCACTCCGC
AAGGTTGTACCCGCGCACGACACTCAATCAGGGTCTATAGCATCTCATCA
GCAGCAGCAAGCAGCAGCTGCACTACTAGCCTACTACTGACGTCAAACAC
ATCATATGTATGTTGCATGTATGTGATCAACGCAAGGGTGTCGGCATGTA
ATGGTACCCATCCATGTGATGATACTAGTCCGAGATCGCCGGGTATGTTT
GTGAGCTTACAAACGTGCGTGGCGTGATGTGTCTATATATTTGTAGTGTC
GGCCCCCGTGTGCGTAGTGTGTCTCACCAACCCATCGCACGACACATCAT
CAGGTAGCAGCTTGCTGCAGCATGCACAGCAGCAGCAGCAGCAGTACAAT
AATAGTTGCAGAAATAAGGGTATGTATGTGAGTGCAGCAGTACGTCAGCA
TCAGCGTTTCATATGATATAAGCGGTAGTCTAACATATAGTCTATGTATC
ATGTCTTATGTATGTGTGCATGTTGTGTGCAATGCAGGGAGGGTTGCCGG
CATGAAGTGTGATACAACAAGACGATCGCCATTGTGTCTACCATGCTGTC
GAGGGAAGAGAATAACACACAACAAACCTAACAGCCGGGCGCTCTTGGTC
TCCCATAGTAATAATaAAAAAAAAAATGTGGCACGGAGGCAGCCAACTAT
TGGTTGATCCACACACATTCCATCGAGCTCACGGAACCACACCCAAAATA
CCTGTAGATAGGCGTCTTCAAAACTTTTTGCGAAAACGAAAACGAAATGC
ATGGAGTTTGGTAACCTCGGAGACTTGCCCATGAGCCTCCCAGGCAGCGA
ACTCCTTCACACAGACTGCGACTGCGGTACACGGCGGTGCAACAGGCACC
AACCAACCCGAACAGAGCGAGGCCCAATCCACACACTACAGCAGCGCAGC
AGACAGCGCCGAGCCGTCATACCCGTCAGTCAGTGCAACAGACAGCACAC
CAGGGCCGTCTACGATACCCACACGCTGACACGATGCATTCCACCGCGTT
ATTTGAAATTGGGCCCCGCGCGTTCTGGGTTTACATCATTTTTGGCGTTA
TCTCTATTCCGCTGCTCCAGCTCCTCGCAGCAGAAACGCGTTAATACCGA
AATGGAGTTTTTTATTTTTTTCCCCAGAAGAACGAAGTTATTTCGTTTTT
GTTTCCGCTATTTCGTTTTTTTAAAAGCGGTGCCCTGGAGAAACGAAAAG
TTCGTGTGTTTTGCGGCGAGACGAGCGTGTGTATCCCATAATCGATCCGG
CTCTCCGCGCTCCGCCATACTTCACAGACATTGCCACTTCTCTGCAGGAG
GCATCCCCTGATGTACATGCCACTGTCGATCACGAGCGTAATTTTGAGAG
GCACCACTTCCTCCGCGCGGAGTTATCCCTATCGTTGGGGTTGATGTTGT
GCTGCAAAACTGGGTCAAAAATTAAAGTAAAATTGGGGGTCGTCTGTGGT
GTGGATTTTCTAGGTCCTGGAGGGGTGGGAGGCGGGTGTAAAAAACCCGG
CTTTTCACGAGGTGGGGGGTTCAACCGTGAACCGTTACAGGCAGTAAGTA
GTCTCCCGTTTTTTATTTGTCTCTCCAACACACCACAGCAGGCACTTCCG
CAAAAAAAATGTGTCTTCGGCTTAGTTAGTTAGTCTTGAATCACCCCTAT
CGCACTTTTTATACCCTAATTCATTAGCTCACTCTGAAAGGGGATCTTGT
ATATGTATATATTTTTTTTCGCGGCTGCAATCCGTCCCACGGGTGACAGG
GTGCCGTCGGGAATTGCAAAGTTCAGGGGCGGTGCTGGCATACACCGCGG
AGTCAAACGTGCTTTCCAGCCAACCTCTCTTCTCCCTCACATTTAACTTT
ATTTTTTACGTCACGCCTGACACCTCGCCGCTCCGAACTTGACCTGCCCG
GTAAACTGTTCGGCAATCTCCTATACTGCAGTCGACGGGCATTCGCGCCC
GTTCGTCACAAAAAACAAAATTACCTTTGCTGCGGTGCTACAGTCAAGAG
AACATCCTGCAAAGCATACTATCGTTGCCGTAAGAGAAGCGTCCCGTATC
CATTTGCCATACTGCATTTAGGAAAAGTAAATCTCGTCTGGCACAAGAAC
GCCCAGCGTGCGTCCTGATGCGAACAATGACGTGTCATTCAATCGGGCAA
ACAGTCACCCAATATAGTGGTGAGAAAGCGATGTGAGAGAAAAAAGCGCA
CCATGTGTTGTACGTCGTCCGTGTCTGACTTCCGTAGTATGTATAATTTG
TGGGCAAATCTCACCCTTCCCCTGGCCTAAGGAAGACAAGGTGCATGCCG
CGCGATCGTAAGAGTGACGTGTACAAGTTGTAGTGATACGTTTCCCAACC
GCCATTACTTTCGTTCTATCGCCGCGCCTACCCTTGCAGGCGCTCGTGTC
GGCCACGGAGGGCGTTCACGACTCGTCGACAACCACTGCC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig66:295796..300785+ >mRNA_P-littoralis_Contig66.84.1 ID=mRNA_P-littoralis_Contig66.84.1|Name=mRNA_P-littoralis_Contig66.84.1|organism=Pylaiella littoralis U1_48|type=CDS|length=336bp|location=Sequence derived from alignment at P-littoralis_Contig66:295796..300785+ (Pylaiella littoralis U1_48)
ATGCAGACAAGTGCGGAGAGACCCGCGGGGGATATGTTGGCGGCAGCAAC
CTCAAGACCCCGGCGCGAAGACGCTTTCGTCAGGGAGGCCAGGCGCGCTC
GGAGAAAGGCTCTCCTGAAGCACCTGTCGGAAGCGGATGATGACCTTGAT
CTCGACGAGGTGTTGAAGCTTGCTGCGGCAGGCACACCGGAGATCGGCAG
CCTCGACTCCGGCCGCTGTGGAAATGACGGCAATTTCGATGTCGAGCAAG
ATATCTTCTCCTCGATTGACGCTCAGGGGCAACAGGCGCTCGTGTCGGCC
ACGGAGGGCGTTCACGACTCGTCGACAACCACTGCC back to top
|