prot_P-littoralis_Contig659.13.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig659.13.2
Unique Nameprot_P-littoralis_Contig659.13.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length455
Homology
BLAST of mRNA_P-littoralis_Contig659.13.2 vs. uniprot
Match: D8LTM3_ECTSI (RING-type E3 ubiquitin transferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM3_ECTSI)

HSP 1 Score: 461 bits (1187), Expect = 2.490e-158
Identity = 255/374 (68.18%), Postives = 282/374 (75.40%), Query Frame = 0
Query:   98 MGHRLAAHPGVQNAIIDDLVQHGRRVPSGRRGIHPNLQAPPQNETGLARLVDMLESEDEHSXXXXXXXXXXXXXETRHLLLQRDRRGLFDYDDEPPLQHLHLNPRVSEDLEDVYAAVQDDGWEPWPEEKGEDSSDSGLSSSRLSDGRLSCSCKRCHTDQGTV--ALDEDPSEGNCWKDVLAEYECDICFEVLVGVHVLDNCGHHFCGACMERWIDNAPQGECPVCRTPVDKLVPVRKMDEMIAKAVDAAAPSKERDTWYERRAHWEGTARRRQEARAA--------APLHSVVHAQGAAAG----PGVARWHGGVGARH-GGRGN--GSEEAGRNGGEGDEXXXXXXFRLNKMQSVIAVAVMLVLAVLRIRTAR 454
            MGHRLAAHPGVQNAI+DDLV+ GRRVPSGRRGIHPNLQ PP NE GLARLVDML+ E+E S              + HL+LQRDRRG+FDYDDEPPL HLHL+PRVS +LE VYA VQ DGW+PW EE+  D S+SGLSSSRLSDGRL CSCK+CH   G      +E+  EG CWKDVLAE+ECDICF+VLVGVHVLDNCGH FCGACMERWIDNAPQGECPVCRTPVDKLVPVRKMDEMIAKAV+AAAPS+ERD WYER+AHWEGTARRRQ              P HSVVHAQGAAAG     GVA W G   AR  GGR N                XXXXX FRL+KMQ+V+AVAVMLV+AV+++R  R
Sbjct:    1 MGHRLAAHPGVQNAILDDLVEQGRRVPSGRRGIHPNLQGPPGNERGLARLVDMLDPEEESSHRSTRTSRSGRGRSSGHLMLQRDRRGMFDYDDEPPLPHLHLDPRVSAELEGVYAEVQADGWQPWREEEKLDGSESGLSSSRLSDGRLGCSCKKCHASSGLSLGTEEEEAQEGTCWKDVLAEFECDICFDVLVGVHVLDNCGHTFCGACMERWIDNAPQGECPVCRTPVDKLVPVRKMDEMIAKAVEAAAPSRERDAWYERKAHWEGTARRRQXXXXXXXXXXXXXTPSHSVVHAQGAAAGIFGRTGVATWFGATDAREAGGRRNRXXXXXXXXXXXXXXXXXXXXGFRLDKMQTVLAVAVMLVMAVIKMRGLR 374          
BLAST of mRNA_P-littoralis_Contig659.13.2 vs. uniprot
Match: A0A4S8MSH8_DENBC (RING/U-box n=1 Tax=Dendrothele bispora (strain CBS 962.96) TaxID=1314807 RepID=A0A4S8MSH8_DENBC)

HSP 1 Score: 63.9 bits (154), Expect = 6.790e-8
Identity = 30/73 (41.10%), Postives = 41/73 (56.16%), Query Frame = 0
Query:  273 DVLAEYECDICFEVLVGVHVLDNCGHHFCGACMERWIDNAPQGECPVCRTPV---DKLVPVRKMDEMIAKAVD 342
            D+  E  C ICF++LVG H+L+ CGH  CG C   WI    Q  CPVCRT       L+P   +D ++ K ++
Sbjct:   90 DLSDEISCPICFDLLVGAHLLNPCGHTLCGPCSYTWITLKKQTTCPVCRTKCCHYKSLIPNIIVDNIVEKYIE 162          
BLAST of mRNA_P-littoralis_Contig659.13.2 vs. uniprot
Match: A0A167RHP8_CALVF (Kinase-like protein n=1 Tax=Calocera viscosa (strain TUFC12733) TaxID=1330018 RepID=A0A167RHP8_CALVF)

HSP 1 Score: 63.9 bits (154), Expect = 4.000e-7
Identity = 31/96 (32.29%), Postives = 50/96 (52.08%), Query Frame = 0
Query:  277 EYECDICFEVLVGVHVLDNCGHHFCGACMERWIDNAPQGECPVCRTPVDKLVPVRK---MDEMIAKAVDAAAPSKE---------RDTWYERRAHW 360
            +Y C ICF+++VG H+ + CGH  CG+C  +W  N     C  CR P+++  PV     +D +I K ++  A + +         R  W +R+A W
Sbjct:  612 DYSCPICFDLIVGCHLTNPCGHSACGSCSTKWAANKTVPTCFACRAPMNRTTPVIPGLLVDNVIEKQINLLAENGDEEWQERGAKRKEWDQRKAAW 707          
BLAST of mRNA_P-littoralis_Contig659.13.2 vs. uniprot
Match: A0A8H3TX00_9TREE (RING-type domain-containing protein n=1 Tax=Naganishia liquefaciens TaxID=104408 RepID=A0A8H3TX00_9TREE)

HSP 1 Score: 62.8 bits (151), Expect = 6.980e-7
Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 0
Query:  277 EYECDICFEVLVGVHVLDNCGHHFCGACMERWIDNAPQGECPVCRTPVDK-----LVPVRKMDEMIAKAVDAAAPSKE-RDTWYERRAHWE 361
            E  C IC  +LVG      CGH FC  C   WI +     CP+CR P+ +     LVP+R +D +I K V+A     E RD W ER A W+
Sbjct:  267 EITCPICMAILVGATAAVPCGHLFCAPCGLSWIRD--HDNCPICRDPLAQPLTIALVPMRVVDALIGKWVEAKGSQWEGRDDWRERCAAWD 355          
BLAST of mRNA_P-littoralis_Contig659.13.2 vs. uniprot
Match: A0A8J2KCI3_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2KCI3_9HEXA)

HSP 1 Score: 56.6 bits (135), Expect = 7.960e-5
Identity = 24/51 (47.06%), Postives = 35/51 (68.63%), Query Frame = 0
Query:  272 KDVLAEYECDICFEVLVGVHVLDNCGHHFCGACMERWIDNA-PQGECPVCR 321
            K++L EY C IC E+LV   V+ +CGH FC  C+++W  ++ P+  CPVCR
Sbjct:   62 KEILEEYRCPICMEILVNTSVI-SCGHRFCLYCIKQWFHHSHPKRFCPVCR 111          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig659.13.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LTM3_ECTSI2.490e-15868.18RING-type E3 ubiquitin transferase n=2 Tax=Ectocar... [more]
A0A4S8MSH8_DENBC6.790e-841.10RING/U-box n=1 Tax=Dendrothele bispora (strain CBS... [more]
A0A167RHP8_CALVF4.000e-732.29Kinase-like protein n=1 Tax=Calocera viscosa (stra... [more]
A0A8H3TX00_9TREE6.980e-740.66RING-type domain-containing protein n=1 Tax=Nagani... [more]
A0A8J2KCI3_9HEXA7.960e-547.06Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 280..320
e-value: 3.4E-5
score: 33.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 279..321
e-value: 3.5E-9
score: 36.9
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 280..321
score: 12.577796
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 262..359
e-value: 7.6E-17
score: 62.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..427
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..237
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 272..339
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 296..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig659contigP-littoralis_Contig659:106643..115467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig659.13.2mRNA_P-littoralis_Contig659.13.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig659 104743..115575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig659.13.2 ID=prot_P-littoralis_Contig659.13.2|Name=mRNA_P-littoralis_Contig659.13.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=455bp
MFNARALIRTGPEAAAALTTRYQEQVSDNNGSEEDQQLRQPISASEVDEA
SNMIFRRTSTPSDYVFSPSAAVPSGPSGDQVYPRLRRNQVLRGEVLAMGH
RLAAHPGVQNAIIDDLVQHGRRVPSGRRGIHPNLQAPPQNETGLARLVDM
LESEDEHSQRSSRANRSGRSGETRHLLLQRDRRGLFDYDDEPPLQHLHLN
PRVSEDLEDVYAAVQDDGWEPWPEEKGEDSSDSGLSSSRLSDGRLSCSCK
RCHTDQGTVALDEDPSEGNCWKDVLAEYECDICFEVLVGVHVLDNCGHHF
CGACMERWIDNAPQGECPVCRTPVDKLVPVRKMDEMIAKAVDAAAPSKER
DTWYERRAHWEGTARRRQEARAAAPLHSVVHAQGAAAGPGVARWHGGVGA
RHGGRGNGSEEAGRNGGEGDEDGDGDGFRLNKMQSVIAVAVMLVLAVLRI
RTAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS