prot_P-littoralis_Contig1169.22.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1169.22.1
Unique Nameprot_P-littoralis_Contig1169.22.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length290
Homology
BLAST of mRNA_P-littoralis_Contig1169.22.1 vs. uniprot
Match: A0A6H5JWA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWA4_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 2.940e-73
Identity = 121/197 (61.42%), Postives = 146/197 (74.11%), Query Frame = 0
Query:   92 TILRHGGNRDHKKRKRAEKSSTINIXXXXXXXXXNKINPTFVNSIGQESLDHITPEFILELLAERHGPGVIFEFGTKMYSVQENMNFKTDVKSGFVSGPVGDDSAWVTHRKNEGFSILLDNLKDKTEEAVQKYVDRIPEEDADNFELDMSYIKKISDLQEEEPMYSKFIRDGFNVLAANINHKTKMTGCDTGKKLKL 288
            ++L  GG+R HK RKRAEK++   +                VN IG+ESLDHITPE I ELLA  HGP VIF FG K+Y+++ENMNFKTDVKSGF+SG + +DSAWVT RK  GFS+LL+NLKD  EEAVQ YVD+IP +D +NFELDMSYI+KI DLQE+ P+Y KFIRDGFNVLA+N+  K +    DTGKKLKL
Sbjct:  106 SMLLXGGSRAHKNRKRAEKTAVTLV---------------IVNPIGKESLDHITPELIQELLAGHHGPDVIFRFGAKLYALEENMNFKTDVKSGFISGRLEEDSAWVTQRKTVGFSMLLENLKDNFEEAVQTYVDKIPYDDVENFELDMSYIRKIFDLQEDMPVYRKFIRDGFNVLASNMAEKLRRIERDTGKKLKL 287          
BLAST of mRNA_P-littoralis_Contig1169.22.1 vs. uniprot
Match: A0A6H5KC66_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC66_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 4.580e-23
Identity = 80/286 (27.97%), Postives = 135/286 (47.20%), Query Frame = 0
Query:    8 HPKLRIRISPTCVDCETLDNVIRSNYDKPVYCGIHSVAGDIYVYIHNRE---RMSSIVLTKLLHDILHILEITKFSLFEGPIMDSTGTILRHGGNRDHKKRKRAEKSSTINIXXXXXXXXXNKINPTFVNSIGQESLDHITPEFILELLAERHGPGVIFEFGTKMYSVQENMNFKTDVKSGFVSGPVGDDSAWVTHRKNEGFSILLDNLKDKTEEAVQKYVDRIPEEDADNFELDMSYIK--KISDLQEEEPMYSKFIRDGFNVLAANINHKTKMTGCDTGKKLKL 288
            H KL +R  P+CVD   L   + +     +   I    G +  Y+ N E   R +   LT+L    + +  I+ +S+ EG + +              KKRKRA  +                     VN +G+ESL HIT E++++LL +    GV F+FG K+YS+ +N+NF+T  +  +    V     W+T  K+E +  +L  L +KT EAV+ Y D + E D ++F + +  +   + S + E + +Y K    G + +A ++N +    G   GK++ L
Sbjct:    5 HRKLVVRAEPSCVDLGILLEPVVAILPGLLLLAITFHDGRVCFYMQNTECVSRENLARLTQLFEKHMDVTGISPYSIIEGELQEEW-----------RKKRKRASSTGATADTCTI-----------LVNPLGEESLQHITREYVVDLLKQTLNVGVFFKFGLKLYSLPQNVNFRT--RKYYSDVRVRTKDKWITVSKDEAYDEILFMLVEKTHEAVEMYKDGVSEFDMNHFNMFLPVVLEGRDSSVPERKKLYEKRRNKGLDTIAVSVNARLSQLGRWRGKRVTL 266          
BLAST of mRNA_P-littoralis_Contig1169.22.1 vs. uniprot
Match: Q8QN59_ESV1K (EsV-1-231 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN59_ESV1K)

HSP 1 Score: 107 bits (266), Expect = 5.680e-23
Identity = 83/287 (28.92%), Postives = 137/287 (47.74%), Query Frame = 0
Query:    6 INHPKLRIRISPTCVDCETLDNVIRSNYDKPVYCGIHSVAGDIYVYIHNRERMSSIVLTKLLHDILHILEITKFSLFEGPIMDSTGTILRHGGNRDHKKRKRAE-KSSTINIXXXXXXXXXNKINPTFVNSIGQESLDHITPEFILELLAERHGPGVIFEFGTKMYSVQENMNFKTDVKSGFVSGPVG-DDSAWVTHRKNEGFSILLDNLKDKTEEAVQKYVDRIPEEDADNFEL--DMSYIKKISDLQEEEPMYSKFIRDGFNVLAANINHKTKMTGCDTGKKLKL 288
            + + KL IR + +C D  T+   +R+   K +Y GI    G +YVY+   ERMS  +LTK L   + I+ I   S ++ P+    G +      +  +  K+ E K+ T  +               FVN +G+ESL HIT  ++ +LL    G  V ++FG K+YS+ +N+NF+   + G  +  V      W+T  ++E +  +L  L +KT EAV  +   IP    D+F++  D     K S + E+  +Y +      N +A ++       G  + KK KL
Sbjct:  101 LRNRKLAIRANLSCFDLSTILESVRTQCPKLIYLGIWYRDGFVYVYVQGAERMSDTMLTKALEGHMVIVHI---STYDAPV----GELQEEWRAKPVRGNKKVEVKADTTAV---------------FVNPLGKESLQHITSNYVADLLRPLPGIDVFYKFGLKLYSLHQNINFRA--RKGDKNARVCCSRKGWITVPRDEAYDEILQILVEKTREAVSMFRQTIPAYYFDHFDMYSDSILAHKDSAVPEQRKLYERRRNKVLNNIAVSVTDNLCRMGGWSDKKRKL 363          
BLAST of mRNA_P-littoralis_Contig1169.22.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 6.480e-22
Identity = 79/284 (27.82%), Postives = 134/284 (47.18%), Query Frame = 0
Query:   10 KLRIRISPTCVDCETLDNVIRSNYDKPVYCGIHSVAGDIYVYIHNRE---RMSSIVLTKLLHDILHILEITKFSLFEGPIMDSTGTILRHGGNRDHKKRKRAEKSSTINIXXXXXXXXXNKINPTFVNSIGQESLDHITPEFILELLAERHGPGVIFEFGTKMYSVQENMNFKTDVKSGFVSGPVGDDSAWVTHRKNEGFSILLDNLKDKTEEAVQKYVDRIPEEDADNFELDMSYIKKISD--LQEEEPMYSKFIRDGFNVLAANINHKTKMTGCDTGKKLKL 288
            KL +R  P+CVD   L   + +     +   I    G +  Y+ N E   R +   LT+L    + +  I+ +S+ EG + +              KKRKRA  +                     VN +G+ESL HIT E++++LL +    GV F+FG K+YS+ +N+NF+T  +  +    V     W+T  K+E +  +L  L +KT EAV+ Y D + E D ++F + +  + +  D  + E + +Y K    G + +A ++N +    G   GK++ L
Sbjct: 2135 KLVVRAEPSCVDLGILLEPVVAILPGLLLLAITFHDGRVCFYMQNTECVSRENLARLTQLFEKHMDVTGISPYSIIEGELQEEW-----------RKKRKRASSTGATADTCTI-----------LVNPLGEESLQHITREYVVDLLKQTLNVGVFFKFGLKLYSLPQNVNFRT--RKYYSDVRVRTKDKWITVSKDEAYDEILFMLVEKTHEAVEMYRDGVSEFDMNHFNMFLPVVLEGRDSPVPERKKLYEKSRNKGLDTIAVSVNARLSQLGRWRGKRVTL 2394          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1169.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JWA4_9PHAE2.940e-7361.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KC66_9PHAE4.580e-2327.97Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
Q8QN59_ESV1K5.680e-2328.92EsV-1-231 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
A0A6H5JH58_9PHAE6.480e-2227.82Reverse transcriptase domain-containing protein n=... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1169contigP-littoralis_Contig1169:56645..57514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1169.22.1mRNA_P-littoralis_Contig1169.22.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1169 56645..57514 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1169.22.1 ID=prot_P-littoralis_Contig1169.22.1|Name=mRNA_P-littoralis_Contig1169.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp
MKNTRINHPKLRIRISPTCVDCETLDNVIRSNYDKPVYCGIHSVAGDIYV
YIHNRERMSSIVLTKLLHDILHILEITKFSLFEGPIMDSTGTILRHGGNR
DHKKRKRAEKSSTINITNNTNNINNNKINPTFVNSIGQESLDHITPEFIL
ELLAERHGPGVIFEFGTKMYSVQENMNFKTDVKSGFVSGPVGDDSAWVTH
RKNEGFSILLDNLKDKTEEAVQKYVDRIPEEDADNFELDMSYIKKISDLQ
EEEPMYSKFIRDGFNVLAANINHKTKMTGCDTGKKLKLF*
back to top