mRNA_P-littoralis_Contig650.20.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig650.20.2
Unique Name	mRNA_P-littoralis_Contig650.20.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig650.20.2 vs. uniprot
Match: A0A6H5JWC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC9_9PHAE)

HSP 1 Score: 303 bits (777), Expect = 4.410e-84
Identity = 292/743 (39.30%), Postives = 356/743 (47.91%), Query Frame = 3

Query:  723 EGSACGEGMLSRGARIHEL---------PRREGAGERLALT-----PLLGLGDLIT-DIDGQDVRRLPFSEVLGLLTRPTPHVITTAVG------GITRKGGSNSTSTXXXNNTSIKESRPRANHA-GNAAKNLQDSLWAASAE-PGTPGSSNK--AAPPSTTRPLVLA-SSPLSPAALPPSSPTDHLGSPPP----------APPLSEFRRGPWSRSTPSKWGSGGSARKDRNKSAAASAAAAPVASFSSPSATPTKSGLIPFKLASLSPWGGGTPGEKPGR-MTRTRSMFSTTLQRMSPRMMGVGMTSPRAAAVGSSSSVPLFGSPPATPPPPSPAGTSPFDNEVDVAPRSPVSGAAFGVGRECGLSPTAPRCGQRELFALDGRGDTDRRSSSLRFSVDVQRDSSRRVLVGDEDGKRDRKGVDEGDDVGSRVVALVSREPMVSSSAAVFRSGRGSEEKDYLYETRYAGGDEEEKTEEDGKGQPRRPLQGMGANNVSGGGIERLASSAQSGERSPCREQQRVEEVP--PREREEEEIVALSRYLAYA-GREWPWVGKAVLWAEYVSLSGHHRWIRSEQCRNALLMVRGALYLLELPTEAVTRYSATGLPTRSRGSWYVRLNASDLSHVSVSIAPREQATGEAAQKTHAFDTNRIDNGSGLILHKRGRVGAYAWLECRNSASRDALVDLVSAWA-AVEMKQVP---LRVEFQSESRLSASFGGQRQGRKVPTLIDERQECPLW 2819
            +G +   G ++ GARI E          P+ E   ER A T     P   L D+++ D D QDVRRLP S  + LL  P  HVITT         G    GG+NS      NN+S   S+ +  +  G   + L  +  +ASA  P +PGSSN    APPST R    A S+P SPAAL   SPT    SP            AP L++ RR  W   +  +   GG  RK+R K   +S   +P     SPSATP  +        SL+PWGGGTPG KP R M+RTRSM + T  RMS R   V + SPR+    +           AT  PPSPA           +P   VS              +   C +R L    G                                                                    G G    D+  E R      + +TE   KG+    L G+ A   +G G E L     S  +    EQ R E VP   RE EEEEIVALS YLA A GR WPW GK +LWAEYVSL+GHHRW+R+E CR+ALL+VRG LYLLELPTEAVTR+   GL T +RGSWYV LNA DLSH+SV +AP E      A+      +       GLILHKRG +GA AW+ECR++ASRDALVD VSAWA A   K       RVE +S + LSA FGG+R+GRKV +L DERQ CPLW
Sbjct:   96 DGFSSSTGGVAGGARIKEKQHGVCFDCHPQHE---ERRAATSSTVSPAGLLSDILSSDTDAQDVRRLPSSGDVRLLKPPIAHVITTTAKIDSMFRGNLSSGGTNS------NNSSNSHSQAKQEYGLGTVPRTLGGAALSASAVGPRSPGSSNGQYTAPPSTNRSTARAPSTPPSPAALGTISPTTRPYSPRRSISIRTPRALAPLLTDVRRVSWRLKSSRRSSVGGGGRKNRAKDGLSSGFFSP-----SPSATPRNASSQKQATGSLNPWGGGTPGGKPSRTMSRTRSMINNTFGRMSLR---VPVISPRSVVPETEXXXXXXXGADATCMPPSPAAA--XXXXXXXSPLGEVS--------------SETPCRERRLLGAVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAQGDC----DGDG----DWWVEAR------DRRTEASEKGKQHH-LAGVRAAGGAGKGAE-LPMVTVSARQDTFSEQSRGE-VPRLDREEEEEEIVALSSYLACARGRGWPWSGKDILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHQTKGLTTSARGSWYVGLNACDLSHLSVPLAPTEPRGASGARSDLEAPS------CGLILHKRGVLGALAWVECRSAASRDALVDHVSAWARAAGTKGTASRSFRVEPRSSAHLSAEFGGERRGRKVASLTDERQACPLW 782

[Close]

BLAST of mRNA_P-littoralis_Contig650.20.2 vs. uniprot
Match: D7FZ63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ63_ECTSI)

HSP 1 Score: 246 bits (629), Expect = 3.350e-68
Identity = 149/267 (55.81%), Postives = 178/267 (66.67%), Query Frame = 3

Query: 2037 KTEEDGKGQPRRPLQGMGANNVSGGGIERLASSAQSGERSPCREQQRVEEVP--PREREEEEIVALSRYLAYA-GREWPWVGKAVLWAEYVSLSGHHRWIRSEQCRNALLMVRGALYLLELPTEAVTRYSATGLPTRSRGSWYVRLNASDLSHVSVSIAPREQATGEAAQKTHAFDTNRIDNGSGLILHKRGRVGAYAWLECRNSASRDALVDLVSAWA-AVEMKQVP---LRVEFQSESRLSASFGGQRQGRKVPTLIDERQECPL 2816
            +TE   KG  +  L G+ A   +G G E L ++  +  R     +Q   EVP   RE EEEEIVALS YLA A GR WPW GK +LWAEYVSL+GHHRW+R+E CR+ALL+VRG LYLLELPTEAVTR+   GL T +RGSWYV LNA DLSH+SV +AP E      A+      +       GLILHKRG +GA AW+ECR++ASRDALVD VSAWA A   K       RVE +S + LSA FGG+R+GRKV +L DERQ CPL
Sbjct:  151 RTEASEKGN-KHDLAGVRAAGGAGTGAELLTATVSA--RQDTFSEQSGGEVPRLDREEEEEEIVALSSYLACARGRGWPWSGKDILWAEYVSLNGHHRWVRAEHCRHALLLVRGWLYLLELPTEAVTRHRTKGLTTSARGSWYVGLNACDLSHLSVPLAPTEPWGACGARSDLEAPS------CGLILHKRGVLGALAWVECRSAASRDALVDQVSAWARAAGTKGTASRSFRVEPRSSAHLSAGFGGERRGRKVASLTDERQACPL 408

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig650.20.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig650.20.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JWC9_9PHAE	4.410e-84	39.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FZ63_ECTSI	3.350e-68	55.81	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig650	contig	P-littoralis_Contig650:85555..96189 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	4388
Hectar predicted targeting category	mitochondrion
Exons	4
Ec32 ortholog description	hypothetical protein
Ec32 ortholog	Ec-02_006410.1
Cds size	2538

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig650.20.2	prot_P-littoralis_Contig650.20.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig650 86556..94623 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791361.7293286-UTR-P-littoralis_Contig650:85554..85834	1680791361.7293286-UTR-P-littoralis_Contig650:85554..85834	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig650 85555..85834 +
1680791361.7412617-UTR-P-littoralis_Contig650:86551..86555	1680791361.7412617-UTR-P-littoralis_Contig650:86551..86555	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig650 86552..86555 +
1680791361.7921398-UTR-P-littoralis_Contig650:94623..96189	1680791361.7921398-UTR-P-littoralis_Contig650:94623..96189	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig650 94624..96189 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791361.7566965-CDS-P-littoralis_Contig650:86555..87089	1680791361.7566965-CDS-P-littoralis_Contig650:86555..87089	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig650 86556..87089 +
1680791361.770345-CDS-P-littoralis_Contig650:91954..93456	1680791361.770345-CDS-P-littoralis_Contig650:91954..93456	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig650 91955..93456 +
1680791361.7798889-CDS-P-littoralis_Contig650:94121..94623	1680791361.7798889-CDS-P-littoralis_Contig650:94121..94623	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig650 94122..94623 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig650:85555..96189+
coding sequence from alignment at P-littoralis_Contig650:85555..96189+

protein sequence of mRNA_P-littoralis_Contig650.20.2

>prot_P-littoralis_Contig650.20.2 ID=prot_P-littoralis_Contig650.20.2|Name=mRNA_P-littoralis_Contig650.20.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=846bp
MAATPRKSIASRLGFRSRRGKPDMTKTKRTTSTSGGARGYKEQAFGTSAA
MKPTPALTTTYGVSPQQSETSTEEQSPVRELSSRDIIHNDNDGNTTAEVL
PAVRAVAAAAAGAGTGIGGRSRVIFEGGSFRSIGDNPLGFTISPATEGSA
CGEGMLSRGARIHELPRREGAGERLALTPLLGLGDLITDIDGQDVRRLPF
SEVLGLLTRPTPHVITTAVGGITRKGGSNSTSTSTSNNTSIKESRPRANH
AGNAAKNLQDSLWAASAEPGTPGSSNKAAPPSTTRPLVLASSPLSPAALP
PSSPTDHLGSPPPAPPLSEFRRGPWSRSTPSKWGSGGSARKDRNKSAAAS
AAAAPVASFSSPSATPTKSGLIPFKLASLSPWGGGTPGEKPGRMTRTRSM
FSTTLQRMSPRMMGVGMTSPRAAAVGSSSSVPLFGSPPATPPPPSPAGTS
PFDNEVDVAPRSPVSGAAFGVGRECGLSPTAPRCGQRELFALDGRGDTDR
RSSSLRFSVDVQRDSSRRVLVGDEDGKRDRKGVDEGDDVGSRVVALVSRE
PMVSSSAAVFRSGRGSEEKDYLYETRYAGGDEEEKTEEDGKGQPRRPLQG
MGANNVSGGGIERLASSAQSGERSPCREQQRVEEVPPREREEEEIVALSR
YLAYAGREWPWVGKAVLWAEYVSLSGHHRWIRSEQCRNALLMVRGALYLL
ELPTEAVTRYSATGLPTRSRGSWYVRLNASDLSHVSVSIAPREQATGEAA
QKTHAFDTNRIDNGSGLILHKRGRVGAYAWLECRNSASRDALVDLVSAWA
AVEMKQVPLRVEFQSESRLSASFGGQRQGRKVPTLIDERQECPLW*

mRNA from alignment at P-littoralis_Contig650:85555..96189+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig650.20.2 ID=mRNA_P-littoralis_Contig650.20.2|Name=mRNA_P-littoralis_Contig650.20.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10635bp|location=Sequence derived from alignment at P-littoralis_Contig650:85555..96189+ (Pylaiella littoralis U1_48)
CTTGTCGCCCTTCGCTCGCAGACCGTATCCCTCCTGGTCCCGCCCCTGCC
GTTAACCTTTCTCGTCTACCGCAGTTTCTCCAACTACGTCTCTGCGAGCC
GTGATCTCGCGCGAACGAGAGAGAGAGAGGAGAGACAAAGAGGGAAGAGG
GGGAGAGCTCGCCCTGCCGTCGGAGAGAAAGGCCTGGCATTTCCCGCTCC
GAAGACCCATCACTAGGAGCGAGTCCCTCAAAACCTGGACGCAAGTCTGG
TCAAGTGCCTGTGAGGGTGCAGGGTGCAGGGTGAGTGTGGAAGTCACGTC
GGAATCACTTGTTGCTATACCCTATGGGAGCACTACACACCACGAAATAT
ATCAGCTTGGATGTGGGTGGTAGGAGCTTAGCACCGCTGCCTGCTGCCTC
GCAATTTACCCGAGCCGTGGTCACTTTTTTCCGCCTCCTGTATGCATACG
TATGGCGGTACAAGACGATATCGTAGAACTGCTGTACGAGTCTGTACTCG
TGCTGTATTGCTAAGTTCTTTCACGCATTCCCAAAATTTTGTTTTTTACA
CACGGTATGATTCGGTAGATCGTAGATTGCCCGCCCCGTTTATCTTCGGT
TTTTCCATAAATTTGACACCACTTTAGTAGTGACAACAACACAAGTCACA
GCAGTTGTTCCCCGCGCTCTCTGACTGTTTGTCCTCCTGTACAGTAACTG
AAGATACAAAGCTGTACATACCATTCATCTCCTCTACCGCAGCACGCCTG
AGGGACTGTCTTATCTGCCTAGGTGATATTGGTTATAGAGAGAATAGCTG
CATCGGGACGACGGCTGCTGCTGCCTGCACCAGAACAGCGTCCGCGGTGT
GTTGCTGCTGGAAAGTACTCCGGAAGCACAGCACCGCTATCTATCTATCT
GACAGTCTCAGGATCGCCCGTCTTTGAACCTTCGAACTTCGAATACTCCT
GTTTGTTGTTGTTACTATTTATCTGCAACCCTGTAAAAACCGCCCAGCAA
CATGGCTGCGACACCCAGAAAATCCATCGCCAGCCGACTAGGATTTCGTT
CGAGGAGAGGCAAGCCTGACATGACGAAAACGAAACGCACCACCAGCACC
TCTGGAGGAGCAAGGGGTTACAAGGAGCAGGCGTTCGGCACGTCCGCTGC
CATGAAGCCAACGCCAGCATTGACTACCACGTACGGGGTCAGCCCCCAGC
AATCTGAAACATCGACGGAGGAGCAATCGCCCGTCAGAGAGCTTTCTTCT
CGGGATATCATCCACAACGACAACGACGGTAATACTACCGCCGAGGTACT
ACCTGCTGTACGAGCAGTAGCAGCAGCAGCAGCCGGTGCTGGCACCGGCA
TTGGCGGACGAAGCAGAGTGATCTTCGAAGGAGGCAGTTTTCGTTCGATA
GGCGACAACCCGCTCGGCTTCACCATCTCGCCCGCAACGGAGGGGTCGGC
TTGCGGCGAGGGGATGTTGTCGAGGGGAGCAAGGATACACGAGCTCCCGA
GGAGGGAGGGAGCAGGAGAGCGTCTAGCCTTGACGGTGAGTGTGTGTGTG
TGCTTGTCCCATTATTCTGACGCCAGTTTATGATACTGCTGTATGCACCT
TTCGGTAGATATGTACTCCGGAGTACATAGTAGATCCCGTCAGCCGGGGT
CACACGGGAGGAAGGTCTCACACGATCTTTTTCGAGTATTTCATACGAAG
TATATACAAGTACATATCATACGACACAGAGTACCTGGTACTCGTTATTC
ATCCTGTTTTGAAAAAGACATTTAGTCGTTCTGTGTGCTGATGTACAGTG
TCTATTTCAACCAGATTTCAACGTACGATGATAAGCTTTAGTCTATGTGG
GACACGCTTGTCCGTCGACAGCAGTGTGTAGACAAAGCTGTACATATTTC
AACCAGATTTCAACGTATGATGGTAAGCTTTACGTGAGACACGCTGTCCG
TCGACAGCAGTTTGTAGACACAGCAGTGTACGGCTAGCTGGTACATTTTT
GATCGAATTTTTAATTTTGATTTAAGTTTGACGAACGATGACAGTTTGAT
TCTGCTGCCAATGTTGGCAGAATTTAAAAATATTTCCACCGTCCTTATCT
CGTGACACGAGCATCCAGCAGCGGTCAAAGGAGAAGTTGGGACGGTGTGC
CGTTTTTCGCGGCCTTGATTTTGTTGTATCATACGAACAGTACGTACCAG
GTACGTAAATAATAGGGAGCTTTCGTCGACGAAGAGAGAACAAAAACAGG
CCGCGTCACACAGTTTTTTCCAGCCTTTTTATCTGGTCGACGATGTACTT
CGATGTAGCTCCCAGTAGGACAGCCAAAATGCTGAAGCAAACCGCCCCAC
TCTCTCCTTTGGCCGCCGGATGCTCGTGTCACGAGTAAAGGGCAACGGCG
TCGGAATTGGTGGCAAACCGTTGACAGGATTACAAAGTGGCCAACGTTGG
CAGCAAAACAACGGCCCACGTTGGCAGATTTATCATAATTCACATGATAG
GATAAGATCCGAATGCATCTCACTACTGCTGAACATGAGTCCGGTGTACG
ATTGTGTCGAACGTTGTCACGTACCAGGTATCATATACGGAGTACTACGT
AATATTATACGTACAGTATCATATAATATTCAACTCTACTTTTTGTGTTG
ACTTCCCCCTGTGTGACCCCAGTTGGAGCGTCGACCTACCCGAAAGGTGC
AGAGTGGCGCCCAATTAAAGGGATGACAACACACACACACACATTTGTTG
TACGGTCCTAAAAGTGGGGAGTGAGAGGACCCGGTACGGACAGATATGAT
CCGATGGTTCGAAGTTCAATGAGCCGAAAAACCTCTGTACGAAGAAAACT
TATACTTCAAGTACTTCGTATTAGTATTTTAAAGGTATACTCTTGTTAAT
CGCCCCCCTTGGTGCTTCGCAGCTCTACGGCGGTCCTGAAGATGGGAAGT
GAGAGGACACCGACTGGTTCAATGGCCCGATGACAATGATCCGACGTCTC
GAATGTACTGTTGTATGATATGATACGATACGAGTACATTTAACCGAAAA
CCATGACAACAATTCACTATTCGAAGTATTTGCACTTGAACCTTAAAGTA
TGTTTGTATGCATACAGGTAGAACATCGCGGCCGCTCTCTCCGCTTTCCG
CTGTGACTCACTCCGGCTCCGTGTGTGTTGTGATGCGTGATTTCATTATC
TACGTTGTCACTCAATCAATAGTACCCAGGAATGGCTCCTAGTCTCTGAC
TAATTTGTAGTTTCGACAAACGCCTGATTTTCTGGCTTTCCGAACTCTGT
CTTCAGTATTCAATACAAATCTACTACCGCAGGATGCTCCCGGAGTCCGT
CGCTGTGAGCAGTAACTCGTGTCTTAAAGGTCCAAGCCCTTGCGACGCAA
TACGGATTCACTTTTCCGATTTTTGAACCGAGACCTCCTTTATTGAATTC
TGTGAACCACGAGGCGTACATCGGATGCTGCTGTAGCAGCCATAATTTTT
TGATAATTTTCAGGAACGCTTCCAGCACACAGCACCCGAAAAAGTAGAGC
ATGCTGAAGTATCGGTGATCGCTACTTTGGCACAATGCTCTCCTCGCACA
CCCTAACCATCGCCGTCGTAGGTTTGAAGGCCGCAGGCACGCAGGTGTGC
CCTGATTGTTTTATACTGCTGTGTACTGGGAGCGTTCAAAAATATCAATT
GAAAAATATGGCCGCTACAGCGGCATCCAAACCACACCTCGCGGCTCAGA
GAACTCGATGAAGGAGAGCTCGGTTCAGAAATCAGAAACGGTGAATCTGT
AGTGCGTCGCAAGGGCTTGGATCCTAGACACTCGTTGTTTCTCACAGCGA
TTGACTCCGGGAGCATTTGTGCTGAAGATATAGCTTGGAAACCCAGAATA
ATCAGGCGTTTGTCGAAATTACCCAGAGCTCTTAGAAGCCATTCCTGGGT
GGCCTTAATGTGTAGGGTAGAGGAATGCTCGCGCTTAGAACATCGCGGAC
GCGGGCACGCAGATGCCCTGTGTACACATATGATGTTGATGCTGCTGCTG
CTGCTGCTGCTGCGATGTCAATCAGCAGGAGGCAATTATTTATGCTTCTT
GTAGTAGGAAAGGAAACGAAGAGCTGTGATTGGCTTGCTCTGCATGTCAT
ACAGGAATTCACCCCCCAAAAACTGATCCCTCGGCAAACGGTAGTCATCA
TGTTGGCGAGCAGTGGTCTTGCTCCGCTCTATGTCAATACGGTACTATCG
TGTGAACGTTGTGTCACGTGCACATGCAATGGATGGCTTTAAGAATCACC
CTACAGGTAACCCTAAGCAAAGGGCTGTTCCCGTTTAGTACGTCGAGCTT
CTCTTACTTTTTTCCCCCTTTGCTTTTTTATTTGTCCCCTTTGCTTACTT
TATATACTTGCTTTATTTTGTTTTTCAACGAAGATATCAGTGTGTTCGTG
TCTCAGATGAGCAATAAGAGTAGATTGACTGGAAACGAACACACATGGGA
AACAAAATCATTCCGCTGCAGCTTCCCAGAGATGGTCCGTTTTCGTTGAA
ATTCGCAAAGTTCAATTGTGATATCATAGGTATGCAGTATGATACGTAAT
CTTAAATCTTAAAAGCGGAGGCAAATAAATAAAAAAAGTAATGAGAAGGA
CAGGTTGTCCACTGCGTGCTGTGACGATTCCGAGACTGGTGTGGGAGCTA
CCGTGCCTCAAAAGCAGTGTACGATAGTGTTTCAAGTTGGCTCGTCTCAA
GCGCGTTGGCAGAACTTTACTTGCGATCGATAGACGAAGAACTCGGCAGG
AACTGTGCTGTTGCGTGTCGAACACCCCACCTACATACCTAGGTGCCCGT
TTGGATGTCCCAAAGCTCCAAAATGTCAGCCGTACGTTTCACGCAGATGA
GTGCGCCTGGCTCAGTGCTCAGCAGCCCTCCCCCCCACCAAGTACTCGGT
GCTCGACGGGATACCAGCTTTGTGTGGAGGTACCCCACGTTTTGAGCAGG
CTCCTACAAGTTGTGTTGCGTGCATCCGGAAAGCACAGCAAACACCTCCC
TCTTGCTCCAACGGTCTGCACGCTGTTTTTTGCCGCATTTTCGATGTATC
ATACGTATTCAGCCAATCTTATTGATGTCGTGAATACGATTAGCTTTTCA
GGAACACAAAACTGATCTATAAAAAAATCTTAACAACTATTACTTCGAAG
TACAAAACATGGCACGTCGGCCCCATGAGAGCCATTTTCGATTTTCGATT
TTTGATCTTAGATTCCTGGCAGTCCTGTTAAGACCGACCCTCAGGCTGTC
GTGTGGTTCTTCCGCTTTGAAAGAGAGGCGCATATCGTATGCTGAACAGC
AGTAGTCTCCCCCTCCCCCCAAAAATAATTTTCAAGTCACAAGTACCCAC
CCGTCCATCTCTGTCATGCCCGATACGTGCGGCACATCTAGACACTTACC
ACAAATGTGGGAAAGCCGTCGGTGGACACACACCCACACCACACATGATT
TAAACGCTCTCCGCTATTCACACGCCGATTGTATCGATGTCATACGGTGT
CTGGCTACAACCGATACAACTGTACGATACACACTAGTGCGCTGTAGCGA
GAGCCGGCCTGCCACCCCTTCCACGAGTCGGTACGAAGCCGTAGGTTGCA
CAAGATATCACGCCGATGTGATACCCGTTGTGGCTTTTAAAAAACATCAC
ACCGTTTGGTATTGTGTAACTTTGACTGGGGGTATGGTGTGGTATCTTCT
GTCGCCCTTTTTACTGATTGACTGAGACAGACTGGCGCCCTTTTCGGGAC
TAAAAAAATGGCGCACGGGTGTGGTATAGCATCGTGCAACTTTTTGCAAG
AAGGGGGTGTGGCATCTTATGAAAGTGTGATACTTTATGCAACCTACATA
CGGTATTTTACTTTTTTTCTCACCGGTAGCCAAGCACCTCTGAGTAAAGC
TGCTGTACAATGAGGTATTATAAGGGACTGAAGTCGGTGCCGGATACCGT
ACGAGGATGAGCAGGCAGACCATCAGGACAAGCGGCTTCATTTTCGTAGT
ACTCGAAAGCAGCAATCACAGCCCGATACGGGTAAAGCCTTCGTTTGCAC
CTGACCGTCGGGTCTAGGAAATGTCCAGGAAATGTCGGTAGCTTCCTATC
ATGCACGCATAAGCCCTTTAAGGATTTTACGGAGGGAAAGTATCGTCGTG
TACAAATTGGACACGACTCAAGCACCTTCGTGTAGCGCGGCGCGGCGGCC
GAATCTCGCGCGGCTCCATTTGGAGCGCTGACAGTACGCTCTAGCGGTGA
AGCGCTATGTGAAGTGCCCGCTTTGAAAGGTCTGAACGTCGGTGGGCTTG
TTTGCGTTAATCTAATTTTTTCGTGTTTCTACTTGCACGTATTTTCGCAG
CCGTTGTTGGGGCTGGGCGACCTTATAACAGACATCGACGGGCAAGACGT
GAGACGCCTACCGTTCTCTGAAGTTCTTGGTCTGCTCACCAGGCCAACAC
CCCACGTCATCACCACCGCAGTCGGCGGCATCACCCGCAAAGGCGGCAGT
AACAGCACCAGCACCAGCACCAGCAACAACACCAGCATAAAAGAAAGTCG
CCCTCGCGCCAACCACGCCGGAAACGCTGCCAAAAACCTGCAGGATTCCC
TCTGGGCGGCTTCTGCCGAGCCCGGCACGCCGGGCAGCAGCAACAAGGCC
GCGCCCCCCTCGACTACCCGACCTTTGGTCCTGGCGTCAAGCCCGCTGTC
GCCAGCGGCACTGCCCCCCTCTTCTCCCACCGACCATCTGGGCTCCCCGC
CACCCGCGCCACCCCTGTCGGAATTTCGGCGTGGGCCGTGGAGTCGAAGC
ACCCCCAGCAAGTGGGGCAGTGGCGGCAGCGCCCGCAAGGACAGAAACAA
ATCGGCGGCGGCGTCGGCGGCGGCGGCTCCGGTGGCGTCTTTTTCGTCCC
CTTCGGCGACGCCGACGAAATCAGGCTTAATCCCCTTCAAGCTGGCATCG
CTGAGCCCCTGGGGGGGGGGCACGCCGGGAGAGAAGCCGGGCAGGATGAC
CAGGACGCGATCAATGTTCAGCACCACGCTCCAGCGGATGTCGCCCCGGA
TGATGGGGGTGGGGATGACGTCCCCCCGGGCGGCGGCCGTGGGCAGCAGC
AGCAGCGTGCCCCTTTTCGGGTCACCGCCAGCCACCCCCCCTCCACCATC
TCCGGCAGGTACTTCGCCATTCGACAATGAGGTCGACGTTGCACCTAGAA
GCCCCGTGTCGGGCGCGGCTTTTGGCGTCGGGCGTGAGTGCGGTCTTTCT
CCGACGGCCCCCCGCTGCGGTCAGCGGGAGCTGTTCGCCCTCGATGGTCG
TGGCGATACGGATCGGAGAAGCAGCAGCCTTAGGTTTTCGGTTGATGTCC
AGCGGGACAGCAGCAGACGCGTCTTGGTTGGTGACGAGGACGGGAAAAGG
GACAGGAAAGGCGTGGACGAGGGGGATGACGTCGGGTCCAGGGTGGTCGC
GCTGGTGTCGAGGGAACCTATGGTTTCGTCCTCAGCGGCGGTTTTCCGGT
CAGGCAGAGGAAGCGAAGAGAAGGACTACTTGTACGAGACGCGTTACGCG
GGAGGCGATGAAGAGGAAAAGACGGAGGAGGACGGAAAGGGACAGCCCCG
GCGTCCTTTGCAGGGGATGGGCGCGAACAACGTCAGCGGGGGCGGAATCG
AACGATTGGCATCTTCCGCGCAGAGCGGAGAACGGAGCCCCTGTCGAGAG
CAGCAGCGTGTCGAGGAGGTGCCGCCGCGGGAGCGGGAGGAGGAGGAGAT
CGTTGCCCTCTCGCGCTACCTGGCGTACGCCGGTCGAGAATGGCCATGGG
TCGGGAAGGCGGTTCTCTGGGCCGAGTACGTCTCTCTCAGCGGGCACCAC
AGGTCTGTTGCACGGCAATTTTGGCCCTTCCGCAGCTTTAGCGGAATGTG
CTCTCATGTATCTCCAACCTTTCAGAGGTGTGTCTCAGCACAAGTTGTAG
AAAACGTGTGGGTAGAGATCGCTCGCTCTAAGGGATAGAAAGAGCGGAAT
CGACAGGGCGTGACACGGGTTGGTGAAGGCGTGTAGGTGCGTGTGTGCGT
GCGTGTGCATAGGGGTATGCGCTGTCGTAAGGAAGATGCCTACAGTAGCT
CTTGTCTTTGTGAATCTGTATGATGCGTTCAAAAAGCCTTCTGCATGCGT
TTATTTTAGTCTCCAAGACCAAACACCACAGAGGATCCGTCTGATTTGCG
CTTATCACAGGGAGTCAGTCGGGCCAAAGCCCAGCAGAGACATGAAGCCA
TGGCTTTTCAAGCGAAGTTATTCCATATCTACATGAAGATAATGGTCAAA
GCACCGCGTGAGACGGCTAACAAACAAGAAAAGCGACAACTTTGGTAGCT
GCGTCCGATGGCGTCTGCCCCTTAAATACACCATTCTCCCATCAACCTGA
CTTGGTTCAACATCTCGCTCCATATTGGTTTTGCACTCAATCGAAAGCCT
GACCATGTGACCTAGCATCGTCGCCTCCTCGTTTTATTTTCGTCTTATTT
TCCTTTTGCCCCTTAAGGTGGATCCGGTCCGAGCAATGTCGCAACGCACT
TCTCATGGTTCGCGGAGCTCTGTATTTGCTCGAGCTCCCCACAGAAGCGG
TGACCCGGTACAGTGCGACAGGCCTGCCAACCCGTTCCCGCGGCAGCTGG
TACGTAAGGCTCAACGCGTCGGACCTCAGCCATGTATCTGTATCGATCGC
GCCCCGCGAACAGGCAACAGGAGAGGCGGCTCAGAAAACGCATGCCTTCG
ATACCAACCGGATCGACAACGGGAGCGGGCTGATCCTTCACAAGCGAGGC
AGGGTTGGTGCATATGCCTGGTTGGAGTGCCGGAATTCCGCTAGCCGCGA
CGCCCTTGTCGACCTCGTCAGTGCCTGGGCGGCTGTAGAGATGAAGCAGG
TGCCTCTGAGGGTGGAGTTTCAATCAGAGTCGCGGCTGTCGGCCAGCTTC
GGGGGGCAGAGACAAGGGAGGAAGGTTCCCACCCTGATAGATGAGAGGCA
GGAGTGCCCGTTGTGGTGACAACTCGGGCGGTTTTGAGATGATTCGAGGG
AAGAGATAAAATAGCACGCCGTTTGGCGGGAGGAGAGAGAGATCACACAC
TGGGTGCTCAAACATGGAATGAGAGAGAGAGGGCGACGGAGAGTCGAAAG
GCTGTTAGGCTGTTGGTTGGGATTGTTGTGTGGTAGAAGTCCGTAAAAGA
GAAGTTCACAACGTCGCTTGGCAAGAGGGTGGTGACTGTATAGTGTATGC
TGTATCTGACGTGGAACGAAATGTTGGTTGGGATTGTTGTGTAGTATGAT
AAAAGGAAACCCTTGAAATGAGGACAGGTCAATGGGGGAGATTGAGCGAT
ACTGTATATTGCTCTCAAGCTAAAGTACTTGGAGGGCAAATAGCGGGTGG
GTGTGTTGAGCCTGTGCACAATAGCCGGGCACTCCGAATTTTACTTCCAA
GCGGTTGGCAATGGTAGACAGCTAAGATCTAGCGTTTTGTTTTTGTTTTT
TTAGCGCGGACGAAGAGGGCTGCCGGCGAACCGGCGTCGGGTGCCAAGAA
AAATCGCGTGGCCAACCTAGATGACATTCAGGCCTCGGAGAAAGGGAGCG
GGGTGTGAAGATGAAAGGGGAGCTGCCTCCTTACGTGAACTCCGGGAGTT
GGACATTTATGCCGCCCTTGTGCAATGCCGGCGCCTCTGTAATGTTTTTT
GATTCCCCTATTTCAGAGTGGGGCACGTGCAAAATAAGTGCAGTTTGTTT
TTTATGCGTGTGTACGAGGGGTTGAGCGAAGAGCGGCTGTGGAGGCTGCT
CGAGTAGACAGCCTGAAGGTTGGGGGTACTCTCGCCCAAGCGTCACCTAC
CCAGCGAGTCGATGTGATAGGTAAATAGTGTTGGAAATTCCACGTTGTCC
TGGTTCAATGTTCGGCTGGTTGGCTGCTCTACTCTGTGGGTGATTGGACG
CCGCAAATATGTGGGGTCGGTTGTCGGGTCTGTCCTACACAAATGATGCC
GCAGCGCATATTGTGAATATATGGGGATGTTACAGGTTATTATGGATGAA
AGTTTTTTTATCGACATGGTGGGGTCTATGCTTGCATACTTCAATCTTTG
GGACTGCGTTTTTTTATGCTATTTTGTTAGCCTTTCCACAAGTGAAGTCG
TATTGCTTTGTCAGGCGTGAAACGTTATCCTTGTCGTTGAGTTCAGCGTG
TTTTTAATATCAATCCGTCATGCCTGGTTGTGAATCCGTTGTGGTGAGAG
GAGGGGGGAGGTGTACAGCAGCAGAAGACCGAGACGGTTGTTTTGAGATT
TATTTTGATTTCAATTATGTCAGGTTTATGTTTTTGCGTCTTGGTGAATT
TTAGCTTTCCCCAAGAAGTGGCGTCACCGCCCTGGAAAAGGTCACCGGTC
GACCAGAGACTTTTCAGCCAAACATGACTCTCATATGTCAATAAAAATTG
TACCGACAAAAAAGCTGCGGGCACCTTTGACATGGTATGATATTCGGGAC
TCCGTTTCGCACGGCCGCCAGACGGAAAACAAGTAACGAATGAAACAGCG
AAGAAGCTCAAAATCAAAGTGAAATTCAAGACCAG

Coding sequence (CDS) from alignment at P-littoralis_Contig650:85555..96189+

>mRNA_P-littoralis_Contig650.20.2 ID=mRNA_P-littoralis_Contig650.20.2|Name=mRNA_P-littoralis_Contig650.20.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2538bp|location=Sequence derived from alignment at P-littoralis_Contig650:85555..96189+ (Pylaiella littoralis U1_48)
ATGGCTGCGACACCCAGAAAATCCATCGCCAGCCGACTAGGATTTCGTTC
GAGGAGAGGCAAGCCTGACATGACGAAAACGAAACGCACCACCAGCACCT
CTGGAGGAGCAAGGGGTTACAAGGAGCAGGCGTTCGGCACGTCCGCTGCC
ATGAAGCCAACGCCAGCATTGACTACCACGTACGGGGTCAGCCCCCAGCA
ATCTGAAACATCGACGGAGGAGCAATCGCCCGTCAGAGAGCTTTCTTCTC
GGGATATCATCCACAACGACAACGACGGTAATACTACCGCCGAGGTACTA
CCTGCTGTACGAGCAGTAGCAGCAGCAGCAGCCGGTGCTGGCACCGGCAT
TGGCGGACGAAGCAGAGTGATCTTCGAAGGAGGCAGTTTTCGTTCGATAG
GCGACAACCCGCTCGGCTTCACCATCTCGCCCGCAACGGAGGGGTCGGCT
TGCGGCGAGGGGATGTTGTCGAGGGGAGCAAGGATACACGAGCTCCCGAG
GAGGGAGGGAGCAGGAGAGCGTCTAGCCTTGACGCCGTTGTTGGGGCTGG
GCGACCTTATAACAGACATCGACGGGCAAGACGTGAGACGCCTACCGTTC
TCTGAAGTTCTTGGTCTGCTCACCAGGCCAACACCCCACGTCATCACCAC
CGCAGTCGGCGGCATCACCCGCAAAGGCGGCAGTAACAGCACCAGCACCA
GCACCAGCAACAACACCAGCATAAAAGAAAGTCGCCCTCGCGCCAACCAC
GCCGGAAACGCTGCCAAAAACCTGCAGGATTCCCTCTGGGCGGCTTCTGC
CGAGCCCGGCACGCCGGGCAGCAGCAACAAGGCCGCGCCCCCCTCGACTA
CCCGACCTTTGGTCCTGGCGTCAAGCCCGCTGTCGCCAGCGGCACTGCCC
CCCTCTTCTCCCACCGACCATCTGGGCTCCCCGCCACCCGCGCCACCCCT
GTCGGAATTTCGGCGTGGGCCGTGGAGTCGAAGCACCCCCAGCAAGTGGG
GCAGTGGCGGCAGCGCCCGCAAGGACAGAAACAAATCGGCGGCGGCGTCG
GCGGCGGCGGCTCCGGTGGCGTCTTTTTCGTCCCCTTCGGCGACGCCGAC
GAAATCAGGCTTAATCCCCTTCAAGCTGGCATCGCTGAGCCCCTGGGGGG
GGGGCACGCCGGGAGAGAAGCCGGGCAGGATGACCAGGACGCGATCAATG
TTCAGCACCACGCTCCAGCGGATGTCGCCCCGGATGATGGGGGTGGGGAT
GACGTCCCCCCGGGCGGCGGCCGTGGGCAGCAGCAGCAGCGTGCCCCTTT
TCGGGTCACCGCCAGCCACCCCCCCTCCACCATCTCCGGCAGGTACTTCG
CCATTCGACAATGAGGTCGACGTTGCACCTAGAAGCCCCGTGTCGGGCGC
GGCTTTTGGCGTCGGGCGTGAGTGCGGTCTTTCTCCGACGGCCCCCCGCT
GCGGTCAGCGGGAGCTGTTCGCCCTCGATGGTCGTGGCGATACGGATCGG
AGAAGCAGCAGCCTTAGGTTTTCGGTTGATGTCCAGCGGGACAGCAGCAG
ACGCGTCTTGGTTGGTGACGAGGACGGGAAAAGGGACAGGAAAGGCGTGG
ACGAGGGGGATGACGTCGGGTCCAGGGTGGTCGCGCTGGTGTCGAGGGAA
CCTATGGTTTCGTCCTCAGCGGCGGTTTTCCGGTCAGGCAGAGGAAGCGA
AGAGAAGGACTACTTGTACGAGACGCGTTACGCGGGAGGCGATGAAGAGG
AAAAGACGGAGGAGGACGGAAAGGGACAGCCCCGGCGTCCTTTGCAGGGG
ATGGGCGCGAACAACGTCAGCGGGGGCGGAATCGAACGATTGGCATCTTC
CGCGCAGAGCGGAGAACGGAGCCCCTGTCGAGAGCAGCAGCGTGTCGAGG
AGGTGCCGCCGCGGGAGCGGGAGGAGGAGGAGATCGTTGCCCTCTCGCGC
TACCTGGCGTACGCCGGTCGAGAATGGCCATGGGTCGGGAAGGCGGTTCT
CTGGGCCGAGTACGTCTCTCTCAGCGGGCACCACAGGTGGATCCGGTCCG
AGCAATGTCGCAACGCACTTCTCATGGTTCGCGGAGCTCTGTATTTGCTC
GAGCTCCCCACAGAAGCGGTGACCCGGTACAGTGCGACAGGCCTGCCAAC
CCGTTCCCGCGGCAGCTGGTACGTAAGGCTCAACGCGTCGGACCTCAGCC
ATGTATCTGTATCGATCGCGCCCCGCGAACAGGCAACAGGAGAGGCGGCT
CAGAAAACGCATGCCTTCGATACCAACCGGATCGACAACGGGAGCGGGCT
GATCCTTCACAAGCGAGGCAGGGTTGGTGCATATGCCTGGTTGGAGTGCC
GGAATTCCGCTAGCCGCGACGCCCTTGTCGACCTCGTCAGTGCCTGGGCG
GCTGTAGAGATGAAGCAGGTGCCTCTGAGGGTGGAGTTTCAATCAGAGTC
GCGGCTGTCGGCCAGCTTCGGGGGGCAGAGACAAGGGAGGAAGGTTCCCA
CCCTGATAGATGAGAGGCAGGAGTGCCCGTTGTGGTGA