prot_P-littoralis_Contig650.15.3 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig650.15.3
Unique Name	prot_P-littoralis_Contig650.15.3
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	248

Homology

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BLAST of mRNA_P-littoralis_Contig650.15.3 vs. uniprot
Match: D7FZ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ62_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 9.340e-45
Identity = 110/224 (49.11%), Postives = 129/224 (57.59%), Query Frame = 0

Query:    5 PTTPVTDDEQWSDETEASPQHSGYTPLDQYQALGEGEDGDDRG------GDQSDHEAGNAEETWREAAEDGGRRFQHDVASIMLRAMEADYLACVESEGRTVSNGPIIPAATSTATAEPQSEASAK-LQPNGNLSSGQQQAVMGEEEGLPIAEVEAPPPXXX------RPISPLGQDQAERVMRAMQGFALSAPALPPARFEADWESPDALANLTATATNGTNA 215
            P+TP TD E WSDETE SP+H+GY  LDQYQ LGE  +GD+        G +         E W     D     Q D+AS++LRAME DY ACVESEG  VSNGPI  A  +T T +P SE  A+ L+ NG L+ GQ                     XXX      RP+SPLGQD+AERV+RAMQGF L+AP+LPPA FEADW  P ALANL A  T    A
Sbjct:    6 PSTPTTDGEHWSDETEGSPEHTGYAALDQYQPLGE--EGDEXXXXXXXXGTEEQRTESVGGEGWPAGVVDVDTSLQPDMASVLLRAMEEDYRACVESEGHVVSNGPIAAATAATETRKPPSEEPAQQLEGNGTLTPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXATMRPVSPLGQDRAERVIRAMQGFTLAAPSLPPAPFEADWGHPSALANLAAANTTSAEA 227

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig650.15.3 vs. uniprot

BLAST of mRNA_P-littoralis_Contig650.15.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FZ62_ECTSI	9.340e-45	49.11	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..164

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig650	contig	P-littoralis_Contig650:43490..48908 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig650.15.3	mRNA_P-littoralis_Contig650.15.3	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig650 43303..50253 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig650.15.3 ID=prot_P-littoralis_Contig650.15.3|Name=mRNA_P-littoralis_Contig650.15.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=248bp
MSTHPTTPVTDDEQWSDETEASPQHSGYTPLDQYQALGEGEDGDDRGGDQ
SDHEAGNAEETWREAAEDGGRRFQHDVASIMLRAMEADYLACVESEGRTV
SNGPIIPAATSTATAEPQSEASAKLQPNGNLSSGQQQAVMGEEEGLPIAE
VEAPPPPPPRPISPLGQDQAERVMRAMQGFALSAPALPPARFEADWESPD
ALANLTATATNGTNAANGTNAATTGAPQVEHREATGRSTAPANDAKR*