prot_P-littoralis_Contig649.50.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig649.50.1
Unique Nameprot_P-littoralis_Contig649.50.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length159
Homology
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BLAST of mRNA_P-littoralis_Contig649.50.1 vs. uniprot
Match: D7FLF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF4_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 8.290e-62
Identity = 99/158 (62.66%), Postives = 121/158 (76.58%), Query Frame = 0 
Query:    6 GKAASAFRNSTTAR-----FCMMALVVLLRGTSFGYALKAGHRAEEQQGPRTTGEYDSGYDVGRRNMIKAIAELYKEEMRRQEEISMEDAVLCDNGPKEISIFCHEAPEVKIVDLAQDHRGNNECLILNINAPDVSSQLVLKCDGSTADDEFGWGEEW 158
            G+ +S  R++   R     F  + L+V+     FG A  AG  + ++      GEYDSGYDV RRNMIKAIA+LYKEEMRRQE++SMEDA+LCDNGPKEISIF HE PEVKIVDLAQDHR NN+CL+LNIN+PDVSS++VLKCDGS + D+FGWGE+W
Sbjct:    9 GRVSSRVRSNILLRPAAAGFWAIMLLVIPGEKPFGCASTAGQTSGKE------GEYDSGYDVSRRNMIKAIADLYKEEMRRQEDMSMEDAILCDNGPKEISIFFHENPEVKIVDLAQDHRNNNDCLVLNINSPDVSSKVVLKCDGSISGDDFGWGEDW 160
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BLAST of mRNA_P-littoralis_Contig649.50.1 vs. uniprot
Match: A0A7S1CH73_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CH73_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 7.760e-21
Identity = 44/85 (51.76%), Postives = 59/85 (69.41%), Query Frame = 0 
Query:   65 RNMIKAIAELYKEEMRRQEEISMEDAVLCDNGPKEISIFCHEAPEVKIVDLAQDHRGNNECLILNINAPDVSSQLVLKCDGSTAD 149
            R+M +A+ +LY+ E  RQ  I   DA   DNGPKEIS+FC +  ++ I DL  D R NNEC++LN+N P VSS+LVL CDG+ +D
Sbjct:   99 RDMPEAVRKLYEREKARQRRIQHSDADSADNGPKEISMFCPKDMQIAIADLNDDERDNNECMVLNLNGPGVSSRLVLFCDGTHSD 183
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BLAST of mRNA_P-littoralis_Contig649.50.1 vs. uniprot
Match: A0A7S2R3B7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R3B7_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 5.430e-15
Identity = 36/79 (45.57%), Postives = 55/79 (69.62%), Query Frame = 0 
Query:   67 MIKAIAELYKEEMRRQEEISMEDAVLCDNGPKEISIFCHEAPEVKIVDLAQDHRGNNECLILNINAPDVSSQLVLKCDG 145
            M + I ++++EE  RQE++  + A+  D GPKEISIFC +AP+VKI DL +     NEC +L IN+P++ S+L + C+G
Sbjct:   28 MRRRIDDMFEEERLRQEQVDPDLAMEEDLGPKEISIFCPQAPDVKISDLPRHAVEENECFVLQINSPELHSRLSINCNG 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig649.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLF4_ECTSI8.290e-6262.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1CH73_9STRA7.760e-2151.76Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2R3B7_9STRA5.430e-1545.57Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig649contigP-littoralis_Contig649:126665..140696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig649.50.1mRNA_P-littoralis_Contig649.50.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig649 125654..141011 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig649.50.1 ID=prot_P-littoralis_Contig649.50.1|Name=mRNA_P-littoralis_Contig649.50.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=159bp
MEDIRGKAASAFRNSTTARFCMMALVVLLRGTSFGYALKAGHRAEEQQGP
RTTGEYDSGYDVGRRNMIKAIAELYKEEMRRQEEISMEDAVLCDNGPKEI
SIFCHEAPEVKIVDLAQDHRGNNECLILNINAPDVSSQLVLKCDGSTADD
EFGWGEEW*
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